The top five teams remained the same in Baseball America's Top 25 rankings, as all five won super regionals. North Carolina, Arkansas and Southern Mississippi each rose in the rankings after winning their super regionals. The Tar Heels climbed one spot to sixth, while the Razorbacks and Golden Eagles each jumped eight places to No. 8 and No. 11, respectively.

The staff of Baseball America determines the Top 25 rankings. Records indicated are through games of June 8 and do not include ties.