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Manually uploaded 3.4.6 and 3.6.4 into separate folders: 3.4.6 is fine, 3.6.4 is not

The problem continues even with all plugins disabled, so unlikely to be a conflict with plugin stylesheets

I have not manually edited any of the files: changes only done through the Atahualpa settings

Tech at my hosting company got snarky when I asked about server side FastCGI issues: after all, if one site works and one doesn't (albeit with different WP and Atahualpa versions) it is unlikely to be server side.

The tech linked me to a Microsoft Knowledge Base article that suggested it could be an issue with incomplete <SPAN> tags - unfortunately I have mislaid the link

"Delete the option 'bfa_ata4" and "Reset all theme options" have no effect either

Do you have any idea what might have changed between 3.4.6 and 3.6.4 to cause this problem?
Thanks in advance.