setOWLModelManager(OWLModelManager modelManager)Deprecated.This call isn't really deprecated - it is just not recommended. If you are thinking of using this call
then probably there is a missing feature in Protégé or there is a plugin capability that
you should consider using instead. Contact the Protégé developers on the p4 mailing list:
http://mailman.stanford.edu/mailman/listinfo/p4-feedback.

initialise

setOWLModelManager

Deprecated.This call isn't really deprecated - it is just not recommended. If you are thinking of using this call
then probably there is a missing feature in Protégé or there is a plugin capability that
you should consider using instead. Contact the Protégé developers on the p4 mailing list:
http://mailman.stanford.edu/mailman/listinfo/p4-feedback.