I do not think you can get just the fenders body color and a black top. But if you plan to wheel this the stock fenders are pure Junk anyway. The painted ones chip crack and like the black ones can be ripped off by hand.

I ordered our 012 Rubi with the w580 auto and we had it built with 4:1, not the 3:73. Works amazingly well with 35"s. still can get a burn out if needed. with about half pedal.

I'm not sure if the online configurator allows it, but I've seen a few around my area that are setup like that. So I'm sure its possible. If not you could always get matching flares + soft top or then switch the soft top for an unpainted hard top.

As for the top, you could order matching flares, soft top only (similar to above), and then have the dealer install a black hard top. We bought ours off the lot with a soft top only and negotiated a dealer-installed hard top into the deal. Now i have both tops, which I wanted.