Stardate: 53049.2 - Seven of Nine discovers that she was previously freed from the collective along with a few others, and that she was responsible for their re-assimilation. They now wish to be restored to their individuality, but it may cost them their lives, as well as Seven's.

During a near-death experience, B'Elanna finds herself aboard the Klingon Death Barge, a spectral vessel which transports dishonoured souls to Grethnor. After seeing her mother there, B'Elanna risks her life to go back and save her mother's soul from this fate, even at the cost of her own.

The ship is placed in danger when it comes under attack from a territorial race of aliens known as the Turei. While sheltering on a planet, Captain Janeway tries to make an alliance with its inhabitants, the Vaadwaur. However, she soon begins to think that the Vaadwaur may pose a bigger threat than the enemy above.

A data-overloaded Seven of Nine starts spreading rumours of a mutiny and insurrection when the ship encounters an alien race who have technology that can catapult the ship light-years closer to home and cut years off their journey.

An obsessed Barclay tries to find a way to communicate with the starship Voyager with the use of an artificially generated micro-wormhole. He becomes so involved that he needs the help of Counsellor Troi to keep his grip on reality.

As the crew enjoys time off in a holo-program created by Tom Paris, and set in an Irish village named 'Fair Haven,' Captain Janeway falls for a handsome holo-character specifically designed for her. A deadly neutrino wave approaching Voyager shortly bring the festivities to a halt as this wave may prove to be more dangerous than they first imagined.

When the Doctor's singing talents are discovered by a technologically superior race, his new found popularity makes him consider resigning his commission to stay on the alien world with his millions of adoring fans.

Seven of Nine is forced into a competition for her life known as 'Tsunkatse,' when she and Tuvok are abducted from the Delta Flyer. If she refuses to fight, Tuvok will be refused the medical aid he needs to keep him from dying from the injuries he sustained from the crash.

Ensign Lindsay Ballard returns to Voyager after being killed during a previous away mission. An alien race known as the Kobali, whose only method of reproduction is 'resurrection' of the dead through genetic engineering had revived her and taken her as a new member of their race. When the full extent of her new Kobali genes are activated, they reach a point where she must choose between her old home on the ship, or her new home with her adoptive Kobali family.

Captain Janeway takes three crewmen with poor performance records on an away mission in the Delta Flyer in an attempt to bring them to Starfleet standards. However, an unexpected collision with a Dark Matter comet leaves the crew in a perilous situation.

An alien poet discovers an unconscious B'Elanna Torres after her crash landing in the Delta Flyer. However, this poet intends on using her in a play based on her life on Voyager to win favour with his Warlord.

News reaches Voyager through the up-and-running Pathfinder project that the Doctor's creator, Lewis Zimmerman, is critically ill. In an attempt to save his life, the Doctor's program is transmitted to the Alpha Quadrant, but once there, he finds Zimmerman does not want to be examined by an 'obsolete' EMH program.

When Voyager encounters some engineering problems, Neelix keeps the Borg children entertained by telling the story of an adventure that the crew experienced several months ago, with the ghost that lives on deck twelve.

Seven of Nine is led to a place known as Unimatrix Zero; a place where Borg drones are individuals for a short period of time during their regeneration. However, once their regeneration is complete, all recollection of the event is erased. Captain Janeway uses this to form a plan of attack that would create a mutiny from within the Collective.