Draws dotplots for all-against-all comparison of a sequence set. polydot generates dotplots on a single diagram. It offers an intuitive graphical representation of the regions of similarity between two sequences. All positions from the first input sequence are compared with all positions from the second input sequence searching for exact matches between sequence regions. The two sequences are the axes of the rectangular dotplot.

Type:

Desktop

polydot specifications

Unique identifier:

OMICS_16136

Interface:

Command line interface

Input data:

A sequence record.

Operating system:

Unix/Linux, Mac OS, Windows

License:

GNU General Public License version 3.0

Stability:

Stable

Software type:

Package/Module

Restrictions to use:

None

Output data:

A feature record.

Programming languages:

C

Computer skills:

Advanced

Maintained:

Yes

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