We have a skyline file containing discovery data (DDA runs of which we build a spectral lib with the dat files from mascot) and no target data. When importing into panorama, it puts this skyline file in the "targeted MS runs" section. Is there a way to annotate that this is a discovery experiment, present in skyline?

Thanks!

Kind regards,
An

vsharma responded:

2016-01-19

Hi An,

Thank you for your question. At the moment all Skyline files uploaded to a folder will appear under the "Targeted MS Runs" table. We don't distinguish between Skyline documents containing targeted data vs. those that were created only to contain spectral libraries since the second use case is not very common.