Figure 1.

Prediction results for the distance criterion of 1,000 nucleotides. The light blue
row shows the results of comparison of DBTSS+H-Invitational data to the manual HAVANA
annotation. We used this as a reference to enable assessment of promoter predictor
performance. The highlighted blue fields denote the score for the best performing
promoter predictor. MaxTol is the maximum allowed mismatch between the predictions
and the reference TSS locations. The programs with names in red officially participated
in the EGASP data submission. The results shown are for the MaxTol = 1,000 nucleotides.
AE is the average mismatch of predictions relative to the most close TSS location
from the HAVANA annotation. It is divided by 1,000 to scale for the graph presentation.
DIP1 and DIP2 are two measures representing distance from the ideal predictor as defined
in [10]. ASM is the average score measure as defined in [10].