I'm having numerous issues on my page, my Total points are way lower than they should be, certain items not showing enchants, I can tell my score is low because i have better gear than any resto shaman on the horde side on quel' dorei and i'm ranked 63rd...

Your totals points are way lower then your current item level because you are using cloth shoulders and you lost Mail Specialization = 5% less intellect for you.Only one item had a problem with enchant, your shield. Problem was that Blizzard changed enchant shield blocking to mastery, its fixed on our side now.