Dear fellow Biosoftware hackers:
I release the first preview release of BioSVG. Dowload it from:
http://www.ccmb.res.in/malay/biosvg/
To run it your need Pastel. Dowload it from:
http://www.ccmb.res.in/malay/pastel/
For the uninitiated:
BioSVG is a Perl framework for generating Scalable Vector Graphics (SVG)
images. For a demo see: http://www.bioinformatics.org/savvy
This release just contains one module Chromatogram.pm. It does a pretty
intelligent job! Yep, it draws chromatogram. I am sorry, no doc yet.
Here it all takes to draw a chromatogram from an ABI chromatogram file.
use BioSVG;
my $trace = BioSVG::Chromatogram->create_from_file(
-file=>'TEST.ab1', # file name
-type=>"ABI", # only ABI supported
# no SCF yet
-height=>200, # height in pixels
-hscale=>2); # Just a number
# increase it to flare
# up the picks
$trace->draw();
$trace->show();
Hope you guys like it.
Malay
Malay Kumar Basu
Centre for Cellular and Molecular Biology
Hyderabad 500007
I N D I A
Fax: +91-40-7160591 or +91-40-7160311
Phone: +91-40-7160222
-----
curiouser at gene.ccmbindia.org
---