1.
Vijay kumar J, et al / Int. J. of Allied Med. Sci. and Clin. Research Vol-2(4) 2014 [326-330]
www.ijamscr.com
326
IJAMSCR |Volume 2 | Issue 4 | Oct-Dec- 2014
www.ijamscr.com
Research article Medical research
Prevalence of non-fermenter as uro pathogen in tertiary care hospital in
Chidambaram, Tamil nadu
Vijayakumar J*1
, Lakshmi Sarayu K2
, V.Udaya3
1
Final Year Post-Graduate, Division of Microbiology, Rajah Muthiah Medical College, Annamalai
University, India.
2
Head of the Department, Division of Microbiology, Rajah Muthiah Medical College, Annamalai
University, India
3
Professor, Division of Microbiology, Rajah Muthiah Medical College, Annamalai University, India.
Corresponding author: Vijay kumar J
Email address: jvniranjan76@gmail.com
ABSTRACT
Background and Objectives: Aerobic, nonfermenting gram-negative bacilli (non-fermenters) are now emerging as
important uropathogens. This study was done to know the prevalence of non-fermenters in Urinary Tract Infections (UTI)
along with their antibiotic sensitivity.
Method: 1361 mid stream urine specimens received in 18 months period from December 2012 to July 2014 were subjected
to Gram, staining, semi-quantitative culture, biochemical tests and antibiotic sensitivity testing as per the standard procedures
in the routine microbiology laboratory and the results were noted.
Results: Out of the 317 culture positive cases with significant bactereuria, 131 (9.7%) were caused by non-fermenters.
Among the non-fermenters, Pseudomonas spp. was the most common (80.6%) followed by Acinetobacter spp. (19.3%).
Majority of patients belonged to the age group of 15 to 50 years and most of them were females. Antibiotic sensitivity testing
revealed that, among Pseudomonas spp., 77.4% isolates were sensitive to Piperacillin, 71.13% sensitive to Amikacin, 41.9%
sensitive to Ciprofloxacin, 35.4% sensitive to Ceftazidime and 90% sensitive to Imipenem. In the case of Acinetobacter spp.,
68% isolates were sensitive to Amikacin, 33.3% sensitive to Norfloxacin and all were sensitive to imipenem. Out of the 6
non-fermenter isolates which were resistant to commonly used antibiotics, 4 were from inpatients indicating the possibility of
nosocomial infection.
Conclusion: The non-fermenters are emerging as important cause of Urinary Tract Infections. In this study, Pseudomonas
spp. was the most common non-fermenter isolated in significant numbers in MSU specimens. But, Acinetobacter spp.
appeared to be more resistant to invitro antibiotics in general.
Key Words: Non-fermentors, Uro pathogen, Microbiology.
INTRODUCTION
The non-fermentative Gram negative bacilli (NF GNB)
are aerobic and non spore forming microorganisms. They
do not utilize carbohydrates or breakdown them through
oxidative metabolic pathway. Previously NF GNB were
considered to be non pathogenic and of very little
International Journal of Allied Medical Sciences
and Clinical Research (IJAMSCR)

2.
Vijay kumar J, et al / Int. J. of Allied Med. Sci. and Clin. Research Vol-2(4) 2014 [326-330]
www.ijamscr.com
327
significance. Recently, rate of infection by NF GNB is
rising, especially in hospitalized and
immunocompromised patients. NF GNB infection
constitutes about one – fifth of all Gram negative bacilli
infections.
These organisms can remain viable on medical devices
and are resistant to many commonly used antibiotics.
Therefore, they play an important role in hospital
acquired infection. Although, rate of isolation of NF GNB
from clinical specimens is increasing rapidly, very few
laboratories in India identify these organisms routinely.
Sometimes, NF – GNB is difficult to identify
phenotypically. Most of them are multidrug resistant
(MDR).1
Malini et al2
from Karnataka, India observed 4.5
% infection rate of NF GNB in their hospital.Their
infection are endogenous or exogenous origin, depending
on several factor such as: use of immunosuppressant
substance, abusive use of wide spectrum antimicrobial
agents, prolong surgical wide spectrum antimicrobial
agents, prolong surgical procedure and inadequate
instrumentation.3
Infections of the urinary tract are the
most frequently encountered serious bacterial illness
affecting humans throughout their life time. They are
second only to infections of the upper respiratory tract as
infectious disorders for which medical intervention is
sought.
Urinary tract infections cannot be diagnosed on clinical
grounds alone. The hallmark of a UTI has been the
presence of a single microorganism of >105
Colony
Forming Units (CFUS) per ml in a clean catch or
midstream urine specimen, with lower numbers usually
indicating contamination. Escherichia coli are the
commonest urinary pathogen accounting for over 80% of
community-acquired infection. Far less commonly
Klebsiella spp, Proteus spp and Staphylococcus
saprophyticus are responsible for community-acquired
infection. The distribution of urinary pathogens in
hospitalized patients is different with Escherichia coli
accounting for about 50% of infections. Enterococcus,
Klebsiella, Enterobacter, Citrobacter, Serratia,
Pseudomonas aeruginosa, Providencia, and
Staphylococcus epidermidis account for most of the rest.
(Bryan et al 1984)(1)
. Aerobic nonfermenting gram-
negative bacilli (nonfermenters) are a heterogeneous
group of organisms that are either incapable of utilizing
carbohydrates as a source of energy or degrade them via
oxidative rather than fermentative pathway. (Koneman
EWet al 1988)(4)
This group includes organisms from
diverse genera like Pseudomonas, Acinetobacter,
Alcaligenes, Flavobacter, Oligella, Flavimonas,
Agrobacter Weeksiella, etc.
These organisms are common inhabitants of soil and
water. They also exist as harmless parasites on the mucus
membranes of humans and animals. Though primarily
regarded as contaminants or incidental organisms, they
are becoming increasingly important as opportunistic
pathogens in immunocompromised patients. They can
also cause infection by gaining access to normally sterile
body sites through trauma. (Baron E.J et al 1990)(2)
.
Though these organisms vary in their potential to cause
infection and antibiotic susceptibility, there are common
disease manifestations and risk factors. Pseudomonas
aeruginosa is the predominant and most well known
organism out of this heterogeneous group (Katsumi
Shigemura et al 2006)(13)
(Jombo G.T.A et al 2008)(14)
.
This is partly due to its easy recognition in the laboratory
as it produces pyocyanin, a blue-green pigment. Other
organization usually get ignored as contaminants because
identification and not possible in a busy routine
microbiology laboratory (Stansfeld JM 1966)9
. It is also
well-known that most of these non-fermenter gram
negative bacilli are resistant to many commonly used
antibiotics for treatment (Gupta V et al 2002)(10)
(Jamal W
et al 2009))(11)
(Nenek A et al 2008)(12)
(Takeynama K et
al 2008)(15)
. Evaluation of significance of isolating these
organisms is complicated by the fact that they are usually
present in mixed culture and the clinicians are rather
unfamiliar with their names. This retrospective study was
done to know the prevalence of non-fermenters in UTI
along with their antibiotic susceptibility.
MATERIALS AND METHODS
Mid stream urine (MSU) specimens collected from both
inpatients and outpatients attending Rajah Muthiah
Medical College and Research Institute, Annamalai
University and Government Hospital, Chidambaram from
December 2012 to July 2014 were included the study.
These MSU specimens were studied for significant
bacteruria those urine specimens containing organisms
and pus cells on grams staining and yielding a pure
culture of 105
or more CFU/ml are considered to be
significant bacteruria cases.

3.
Vijay kumar J, et al / Int. J. of Allied Med. Sci. and Clin. Research Vol-2(4) 2014 [326-330]
www.ijamscr.com
328
All urine samples were plated on blood agar, MacConkey
agar and nutrient agar, and incubated at 37°C for 18-48
hours and growth recorded, and lactose non-fermenting
colonies were followed. Morphology and motility of the
organisms were determined by Gram staining and
hanging drop method respectively and oxidase test was
done.
All the Gram-negative bacilli grew on Mac Conkey agar
or blood agar, whether oxidase positive or negative were
inoculated on Triple sugar iron agar medium (TSI).
Organisms grew on Triple Sugar Iron and produced an
alkaline reaction were provisionally considered to be
nonfermenter gram negative bacilli, and were inoculated
into Hugh and Leifson’s medium for glucose, lactose,
sucrose and maltose to find out whether a particular
organism was oxidizer or non-oxidizer and identified
particular organism its biochemical reactions
characteristics.
a) Lack of evidence of glucose fermentation.
b) Positive cytochrome oxidase reaction.
c) Failure to grow on MacConkey agar.
In-vitro antibiotic sensitivity test was performed by Kirby
Bauer’s disc diffusion method using Muller Hinton Agar
as per Clinical Laboratory Standards Institute (CLSI)
guidelines and susceptibility pattern was noted. (Quinn PJ
1988)(6)
In this study, we have included only the non-
fermenters causing UTI. First and second line antibiotics
used for oxidase positive non-fermenters were gentamicin
(10mg), tobramycin (10mg), netilmycin (30mg), amikacin
(30mg), ciprofloxacin (5mg) , ceftazidime & piperacillin
(100mg), where as for oxidase negative non-fermenters
gentamycin (10mg), netilmycin (30mg), amikacin
(30mg), norfloxacin (10mg), ampicillin (10mg),
amoxicillin-clavulanic acid (10mg), cefuroxime (30mg) &
cefotaxime (30mg). Isolates resistant for all first & second
line antibiotics were tested against third line antibiotics
which included aztreonam (30mg), cefpirome (30mg),
ticarcillin-clavulanic acid (30mg), pipercillin –tazobactam
(30mg), cefoperazone-sulbactum & imipenem (30mg) for
both oxidase positive & negative non-fermenters. All
culture media and antibiotic discs were from Himedia
Laboratories Pvt Ltd, Mumbai, India.
RESULTS
Out of the one thousand three hundred and sixty one MSU
specimens, no significant growth was recorded in one
thousand forty four (76.7%) specimens where as three
hundred and seventy one (23.2%) specimens showed
significant growth. This indicates that approximately ¼ of
the total specimens are significant bactereuria cases. Out
of urinary isolates with significant bactereuria, number of
fermenter gram negative bacilli was 256 (80.2%), non-
fermenters gram negative bacilli was 31 (9.7%), gram
positive cocci was 17 (5.3%) and yeasts 13 (4.1%). Thus
fermenter GNBs caused more than cases of significant
bactereuria where as the remaining cases were caused by
non-fermenter GNBs, GPCs and yeasts. In case of non-
fermenter GNBs, the number of Pseudomonas spp. was
25 (80.6%) and Acinetobacter spp. 6 (19.3%), in
Acinetobacter species - Acinetobacter baumannii 5
(83.3%), Acinetobacter lwoffi – 1 (16.6%).
DISCUSSION AND CONCLUSION
Urinary tract infections are found in all age groups. The
incidence is higher in male infants due to presence of
congenital anomalies (Stansfeld J.M 1966)(8)
. From
adulthood to the age group of 65 years, the incidence of
UTI is very high in women as compared to men. In older
patients there is a progressive decrease in the female to
male ratio due to development of obstructive uropathy
from the prostatic enlargement. The results of this study
are in line with the generalobservation regarding the age
groups (Stansfeld J.M 1966)(8)
.
In the present study, non-fermenter GNBs were found to
be significant in 9.7% cases, second only to the
fermenters (80.2%). Pseudomonas aeruginosa is an
established pathogen of urinary tract. (Rambaugh K.P et
al 1999)(7)
. Pseudomonas spp. was the commonest non-
fermenter isolate in the present study being significant in
7.8% of cases. Acinetobacters are ubiquitous in
environment and in hospitals (Quinn P.J. 1988)(6)
. They
account for 1 to 3 percent of nosocomial infections, being
second only to P.aeruginosa as non-fermenters in their
recovery from clinical specimens. (Hall G.S 1995)(3)
Acinetobacters have been implicated in causation of a
variety of illness including UTI. (Pederson M.B et al
1970)(5)
. They accounted for 01.80% cases in this study.
A high level of drug resistance was observed in general
for majority of strains of these bacterial species in
different studies (Gupta V et al 2002)(10)
(Jamal W et al
2009)(11)
(Nenek A et al 2008)(12)
(Jombo G.T.A et al
2008)(14)
(Takeyama K et.al., 2008)(15)
which is in line
with the results of this study. Out of the 6 non-fermenter
urinary isolates which were resistant to all first and
second line antibiotics invitro, 4 were from inpatients.
This could be due to the fact that most of these isolates

4.
Vijay kumar J, et al / Int. J. of Allied Med. Sci. and Clin. Research Vol-2(4) 2014 [326-330]
www.ijamscr.com
329
may be from UTI with nosocomial origin (Marcus Net.al.)(16)
Age Distribution in Male and Female with UTI (31 Isolates)
S.No. Age Groups (Years) Total Number Male Female
1. >15 Years 6 (19.3%) 4 (66.6%) 2 (33.3%)
2. 15 – 50 Years 13 (41.9%) 5 (38.4%) 8 (61.5%)
3. >50 Years 12 (38.7%) 7 (58.3%) 5 (41.6%)
Non-fermenters were found to be significant in 31 cases,
in which 20 were in-patients and 11 were attending
Outpatients Department. In this, 17 were males and 14
females. Children below 15 years of age were four in
which three were males and two are females. In the
remaining 25 cases, 13 were in the age group between 15
to 50 years (5 males & 8 females) and 12 were above the
age of 50 years (7 males & 5 females).
Antibiotic sensitivity pattern of non-fermenter in urine samples
(31 Isolates)
S.No. Antibiotics P.aeruginosa n=25 A. Baumannii n=5 A. lowffi n=1
1. Amikacin (30mg) 18 (72%) 4 (66.6%) 1 (100%)
2. Gentamicin (10mg) 11 (44%) 4 (66.6%) 1 (100%)
3. Ciprofloxacin (5mg) 13 (52%) 2 (33.3%) (0%)
4. Ceftazidime (10µg) 11 (44%) (0%) (0%)
5. Piperacillin (100mg) 19 (76%) (0%) 1 (100%)
10 Isolates 6 Isolates
6. Imipenem (30mg) 9 (90%) 5 (100%) 1 (100%)
7. Piperacillin and Tazobactam (30mg) 4 (40%) 3 (60%) 1 (100%)
8. Cefaperazone and Sulbactam (30mg) 5 (50%) 2 (40%) (0%)
9. Aztreonam (30mg) (0%) (0%) (0%)
10. Cefpirome (30mg) (0%) (0%) (0%)
11. Ticarcillin – Clavulanic Acid (30mg) (0%) (0%) (0%)
This study revealed that for Pseudomonas spp.,
Piperacillin and Amikacin are most effective (Sussman M
1998)(9) followed by Ciprofloxacin and Ceftazidime in
the group of first and second line antibiotics and also
Imipenem to be the most effective followed by
Cefoperazone-Sulbactam and Piperacillin-Tazobactam in
the group of third line reserved antibiotics. For
Acinetobacter spp., Aminoglycosides in the group of first
and second line antibiotics and Imipenem in the group of
third line reserved antibiotics are found to be most
effective. A previous study has reported that for
Pseudomonas aeruginosa, amikacin, ceftazidime and
piperacillin are the recommended antibiotics (Gupta V et
al 2002) (10) which is in accordance with the results of
our study. But other studies reported multiple drug
resistance in Pseudomonas aeruginosa isolates
(Takeyama K et al 2008) (15), (Jombo G.T.A et al 2008)
(14), (Katsumi Shigemura 2006) (13). It has been also
reported that Acinetobacter infection in hospitalised
patients showed high degree of resistance to almost all the
antibiotics used routinely necessitating its susceptibility
testing for newer drugs (Gupta V et al 2002) (10) which is
supported by our study. Also, all strains of Acinetobacter
spp. were found sensitive to imipenem in our study
though emergence of resistance to this group of
antibiotics has been reported in previous studies (Jamal W
et al 2009) (11) (Nenek A et al 2008) (12).
From the present study it can be concluded that non-
fermenter gram negative bacilli though regarded as
contaminants are important bacteria causing hospital and
community acquired UTI. If recovered in pure culture, a
repeat urine specimen should be taken to confirm their
presence, and the strain should be identified up to the