For the analysis and comprehension of genomic data. Bioconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioconductor uses the R statistical programming language - see below for information about R on Legion.

Visualize a chemically intelligent drawing interface that provides a portal to an entire range of analytical tools, and facilitates the transformation of structural or analytical data into professional, easy-to-decipher reports or presentations

The Digital Shoreline Analysis System (DSAS) is computer software that computes rate-of-change statistics from multiple historic shoreline positions residing in a GIS. It is also useful for computing rates of change for just about any other boundary chang

Contains detailed, illustrated coverage of the first two months of human embryonic development and charts the emergence of the head and neck, nervous system, special senses and all the major organ systems of the thorax and abdomen.

A popular method for adding animation and interactivity to web pages. Flash is commonly used to create animation, advertisements, and various web page Flash components, to integrate video into web pages.

An interpreter for the PostScript (TM) language, with the ability to convert PostScript language files to many raster formats, view them on displays, and print them on printers that don't have PostScript language capability built i

Hot Potatoes suite includes six applications, enabling you to create interactive multiple-choice, short-answer, jumbled-sentence, crossword, matching/ordering and gap-fill exercises for the World Wide Web.

ICE-GB consists of a million words of spoken and written English and adheres to the common corpus design. 200 written and 300 spoken texts make up the million words. Every text is grammatically annotated, permitting complex and detailed searches across th

iTunes is a proprietary digital media player application, used for playing and organizing digital music and video files. The program is also an interface to manage the contents on Apple's popular iPod and other digital media players such as the iPhone an

Adobe Photoshop Elements software combines power and simplicity so you can make your photos look extraordinary, share your life stories in unique print creations and web experiences, and easily manage and protect all your photos and video clips.

Adobe Creative Suite 4 Production Premium software is a must-have solution for creative professionals who need to craft world-class video, audio, and interactive media â€” on air, online, on device, and invariably on deadline

Is an integrated system of software products. That enables the programmer to perform:
data entry, retrieval, management, and mining
report writing and graphics
statistical analysis
business planning, forecasting, and decision support
operations

An open source SFTP and FTP client for Microsoft Windows. Its main function is secure file transfer between a local and a remote computer. Beyond this, WinSCP offers basic file manager and file synchronization functionality

The program classifies species and samples, producing an ordered two-way table of their occurrence. The process of classification is hierarchical; samples are successively divided into categories, and species are then divided into categories on the basis

Used extensively for automated model calibration and data interpretation in groundwater and surface-water hydrology, geophysics, geotechnical, mechanical and mining engineering as well as many other fields.

Adobe Photoshop Lightroom software is essential for today's digital photography workflow. Now you can quickly import, process, manage, and showcase your images â€” from one shot to an entire shoot. With Lightroom 2, you spend less time in front of the co

Recording, mixing, editing, and mastering â€” Adobe Audition software is the all-in-one tool set for professional audio production.
Use Adobe Audition to:
Create your own music
Record and mix a project
Produce a radio spot

Authorware is the leading visual authoring tool for creating rich-media e-learning applications for delivery on corporate networks, CD/DVD, and the Web. Develop accessible applications that comply with learning management system (LMS) standards.

Adobe Director and Adobe Shockwave Player software help you create and publish compelling interactive games, demos, prototypes, simulations, and eLearning courses for the web, Mac and Windows desktops, DVDs, and CDs.

Adobe PageMaker software is the ideal page layout program for business, education, and small- and home-office professionals who want to create high-quality publications such as brochures and newsletters.

Adobe Soundbooth software makes it easy to create and edit audio for all your productions. Task-based features and tight integration with other Adobe applications let you edit sound and accomplish audio tasks with complete creative control.

SQL Server Standard edition includes the core database engine, along with the stand-alone services. It differs from Enterprise edition in that it supports fewer active instances (number of nodes in a cluster).

Microsoft Visual Studio is an Integrated Development Environment (IDE) from Microsoft. It can be used to develop console and graphical user interface applications along with Windows Forms applications, web sites, web applications, and web services.

UCL Moodle is the centrally supported virtual learning environment (VLE) used in over 2000 of UCL's courses and programmes to support and enhance teaching, learning and research. All members of UCL are able to login to Moodle.
The Moodle service is pro

MapInfo Professional has the ability to combine and display, on a single map, data from a variety of sources that are in different formats and projections. The software is capable of overlaying raster and vector layers on the same map.

JMP (pronounced "jump") is a computer program that was first developed by John Sall and others to perform simple and complex statistical analyses. It dynamically links statistics with graphics to interactively explore, understand, and visualize data.

A literacy support software designed to assist users of all ages who require extra assistance when reading or composing text. The software provides users with dyslexia, literacy difficulties and English as a Second Language with literacy support.

Exchange Server Standard Edition enables rich and productive collaboration among its users and is designed for the mailbox needs of small to medium organisations. Also appropriate for non-mailbox roles in a larger Exchange deployment.

ATLAS (Automatically Tuned Linear Algebra Software) provides self-tuning implementations of BLAS and parts of LAPACK. The versions deployed on Legion now include full LAPACK, and there are builds for the system GCC, GCC 4.4.0 and the Intel compilers.

FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data (as well as of even/odd data, i.e. the discrete cosine/sine transforms or DCT/DST).

PLplot is a cross-platform software package for creating scientific plots. To help accomplish that task it is organized as a core C library, language bindings for that library, and device drivers which control how the plots are presented in non-interactiv

ScaLAPACK is a parallel subset of LAPACK. There are versions on Legion for system GCC and GCC 4.4.0 compilers with OpenMPI. This library depends on the corresponding ATLAS, OpenMPI and BLACS libraries.

CP2K performs atomistic and molecular simulations. There are two versions on Legion: The most recent branch version (2_1) and the trunk release as of 15th February 2011.
CP2K has considerable dependencies (including a special version of OpenMPI) an

LAMMPS is an open source parallel molecular dynamics code which exhibits good scaling in a wide range of environments. The version deployed on Legion has been built as both an executable ("lmp_legion") and as a library ("liblmp_legion.a").

NAMD is a parallel molecular dynamics package which shows exceptional scaling on a variety of systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University

R (GNU S) is an integrated suite of software for data manipulation, analysis and graphical display with strong support for a wide range of statistical methods. A number of add-on packages are also installed.
Bioconductor provides tools for the analysi

ROOT provides a set of OO frameworks for handling, analysing, and visualising large amounts of data. Included are specialised storage methods, methods for histograming, curve fitting, function evaluation, minimization etc. ROOT includes a built-in CINT C+

MapPoint 2011 helps you visualize your business in a whole new way. With the easy-to-use software mapping tools in Microsoft MapPoint, you can create information-rich maps to pinpoint data relationships, identify business trends and highlight opportunitie

QuarkXPress is design software that lets anyone create and publish rich, compelling materials for print, the Web, e-readers, tablets, and other digital media in one easy-to-use tool â€” no coding or programming required.

a set of molecular mechanical force fields for the simulation of biomolecules (which are in the public domain, and are used in a variety of simulation programs); and a package of molecular simulation programs which includes source code and demos

Nyquist is a language for sound synthesis and music composition. It is implemented in C and C++ and runs on Win32, OSX, and Linux. Nyquist combines a powerful functional programming style with efficient signal-processing primitives.

Windows Server Datacenter is an advanced server platform that provides more cost-effective and reliable support for mission-critical workloads. It offers innovative features for virtualization, power savings, and manageability and helps make it ea

Microsoft System Center 2012 Configuration Manager makes it easier for IT to empower users to be productive with a unified infrastructure that delivers and manages rich user experiences across corporate and consumer devices.

Adobe® Presenter 8 software helps you communicate more effectively with engaging videos and interactive presentations created in Microsoft PowerPoint. Minimize the time, effort, and cost of producing and editing videos by doing it yourself at your desktop

AdminStudio provides enterprise IT teams, including the MSI packager, with the most advanced software packaging tools to efficiently prepare reliable application packages for deployment with a complete suite of automated MSI packaging, customization, test

AppGini is a program that helps you develop web database applications instantly. You do not need to have any programming background to use it. Just define your database, set some options, click the Generate button, and you're done!

Coulomb 3.0 is designed to investigate Coulomb stress changes on mapped faults and earthquake nodal planes, and is intended both for publication-directed research and for university teaching and instruction. Available with Matlab.

is a set of integrated tools for examining size and shape variation among objects described by sets of landmark coordinates. These tools provide for 2 and 3 dimensional visualisation of shape and shape differences.

Petra is an integrated application with a common database and interface for project and data management, well log analysis, mapping, cross-sections, seismic integration, production and reservoir analysis and 3D visualization.

Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer

Dragon NaturallySpeaking 12 Premium ignites new levels of productivity by letting you interact with your PC by voice at work, home or school.
Dictate or modify documents, spreadsheets and presentations, send email, search the Web and more. Even capture

The NAG Toolbox for MATLAB is a large and comprehensive numerical toolkit that both complements and enhances MATLAB. It contains over 1,500 functions that provide solutions to a vast range of mathematical and statistical problems.

ProductivitySuite allows you to meet your GIS-related business challenges head-on. It provides a consistent, cost-effective and straight forward means of managing and using your UK data within an ArcGIS environment.
An extension to ArcGIS for Desktop,

Adobe Digital Editions software offers an engaging way to view and manage media rich eBooks and other digital publications. Use it to download and purchase digital content, which can be read both online and offline. Transfer copy-protected eBooks from you

Lingo for Windows has been designed to meet the needs of translators, localizers and businesses that need to create and maintain their own terminology bases, dictionaries or glossaries, whether monolingual or multilingual.

Mendeley is a desktop and web program for managing and sharing research papers, discovering research data and collaborating online.
It combines Mendeley Desktop, a PDF and reference management application with Mendeley Web, an online social network fo

ModelBuilder is used to build, validate, execute and deploy high-fidelity predictive models of chemical processes, which can be validated against experimental or plant data using built-in advanced parameter estimation techniques.

AB Tutor is the perfect teaching tool for networked classrooms and labs, allowing you to simply and effectively control, manage, monitor, demonstrate, support and collaborate with your students.
Computers in the classroom have created amazing opportun

DROID is a software tool developed by The National Archives to perform automated batch identification of file formats. Developed by our Digital Preservation department as part of its broader digital preservation activities, DROID is designed to meet the f

Enthought Canopy is a comprehensive Python analysis environment that provides easy installation of the core scientific analytic and scientific Python packages, creating a robust platform you can explore, develop, and visualize on. In addition to its pre-b

Free-OCR.com is a free online OCR (Optical Character Recognition) tool. You can use this service to extract text from any image you supply.
This service is free, no registration necessary. We also do not need your email address.
Just upload your i

GIMP is an acronym for GNU Image Manipulation Program. It is a freely distributed program for such tasks as photo retouching, image composition and image authoring.
It has many capabilities. It can be used as a simple paint program, an expert quality

Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency.
Git is easy to learn and has a tiny footprint with lightning fast performance. It outclasses SC

The pinyin method (simplified Chinese: 拼音输入法; traditional Chinese: 拼音輸入法; pinyin: pīnyīn shūrù fǎ) refers to a family of input methods based on the pinyin method of romanization.
In the most basic form, the pinyin method allows a user to input Chinese

This software allows you to create a Summary of Findings (SoF) table. You can import data from a Review Manager 5 file, edit the data, and then export a Summary of Findings table or import it into a Review Manager 5 file. GRADEpro performs many of the cal

IntelliJ IDEA is a Java integrated development environment (IDE) for developing computer software. It is developed by JetBrains, and is available as an Apache 2 Licensed community edition,[1] and in a proprietary commercial edition.

K-Lite Codec Pack is a collection of audio and video codecs for Microsoft Windows that enables the operating system and its software to play various audio and video formats generally not supported by the operating system itself. K-Lite Codec Pack also inc

SimaPro, the leading LCA tool, can help you put the metrics behind your sustainable product development and sustainability goals. You can make solid decisions to positively change your product’s life cycle.