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In one experimental outline of the Swiss Webster study the mice w

In one experimental outline of the Swiss Webster study the mice were fed on the same day and analysed on different days post-treatment. In the second experiment mice were fed on days 3, 7 and 14 prior to the analysis and mice were then all analysed on

the same day. Both experimental designs Palbociclib yielded results that were indistinguishable; therefore, data from both Swiss Webster experiments were combined. The experiment with 129/SvEv mice was staggered so that mice belonging to one experimental time-point group were analysed on two different days. Mice were killed by cervical dislocation prior to faecal slurry inoculation (axenic) and on days 3, 7, 14 and 28 post-inoculation. Colon, caecum and ileum were excised, cut longitudinally and half of each organ was prepared in paraffin with haematoxylin and eosin staining for light-microscopic examination as detailed previously [8]. The slides were reviewed in a blinded fashion and were assigned a histological score for intestinal inflammation ranging from 0 (no injury) to 10 (maximal injury). The histological inflammation scale represents the numerical sum of four scoring criteria: mucosal ulceration, epithelial hyperplasia, lamina propria mononuclear infiltration and lamina propria Volasertib supplier neutrophilic infiltration [8]. To study epithelial barrier function a segment of colon was assayed in Ussing chambers,

as described previously [9]. In the chambers the flux of [3H]-labelled mannitol from the mucosal to the serosal side was monitored as an indicator for the permeability of the intestinal epithelial layer. Parts of colon, caecum and ileum were cultured for 24 h in 1 ml complete RPMI-1640 medium, as described previously [8]. Cytokine release in the supernatants was quantified using standard sandwich Rutecarpine enzyme-linked immunosorbent assay (ELISA) techniques. For the ELISA the following antibodies were used: anti-interferon (IFN)-γ (clone R4-6A2), anti-tumour necrosis factor (TNF)-α (clone G281-2626), anti-interleukin (IL)-17 (clone eBioTC11-18H10·1),