We analytically consider the spontaneous formation of a fermionic crystalline geometry in a gravity background with Lifshitz scaling and/or hyperscaling violation. A fermionic vortex lattice solution sourced by the lowest Landau level has been obtained. Thermodynamic analysis shows that the fermionic vortex lattice favors an equilateral triangular configuration, regardless of the values of the Lifshitz scaling z and the hyperscaling violation exponent.. Our results also show that the larger z or lower. leads to deeper minima in the free energy.