Publications

2017

Résumé: PurposeBivalve production is an important aquaculture activity worldwide, but few environmental assessments have focused on it. In particular, bivalves’ ability to extract nutrients from the environment by intensely filtering water and producing a shell must be considered in the environmental assessment.MethodsLCA of blue mussel bouchot culture (grown out on wood pilings) in Mont Saint-Michel Bay (France) was performed to identify its impact hotspots. The chemical composition of mussel flesh and shell was analyzed to accurately identify potential positive effects on eutrophication and climate change. The fate of mussel shells after consumption was also considered.Results and discussionIts potential as a carbon-sink is influenced by assumptions made about the carbon sequestration in wooden bouchots and in the mussel shell. The fate of the shells which depends on management of discarded mussels and household waste plays also an important role. Its carbon-sink potential barely compensates the climate change impact induced by the use of fuel used for on-site transportation. The export of N and P in mussel flesh slightly decreases potential eutrophication. Environmental impacts of blue mussel culture are determined by the location of production and mussel yields, which are influenced by marine currents and the distance to on-shore technical base.ConclusionsBouchot mussel culture has low environmental impacts compared to livestock systems, but the overall environmental performances depend on farming practices and the amount of fuel used. Changes to the surrounding ecosystem induced by high mussel density must be considered in future LCA studies.

Résumé: * To meet the Convention on Biological Diversity's Aichi Target 11 on marine biodiversity protection and Aichi Target 6 on sustainable fisheries by 2020, as well as the Sustainable Development Goal (SDG) 2 on food security and SDG 14 on oceans by 2030, there is an urgent need to rethink how best to reconcile nature conservation and sustainable development. * This paper argues for effective governance to support processes that apply principles of sustainable development and an ecosystem approach to decide about economic activities at sea such as aquaculture. It describes opportunities, benefits and synergies between aquaculture and MPAs as a basis for wider debate. The scope is not a comprehensive analysis of aquaculture and MPAs, but rather to present examples of positive interactions between aquaculture activities and MPAs. The unintended negative consequences are also discussed to present balanced arguments. * This work draws from four workshops held in 2015 and 2016 and used to collect information from about 100 experts representing various sectors and perspectives. * It is recognized that aquaculture is an important activity in terms of sustainable development. It can play a role in providing food security, poverty alleviation and economic resilience, in particular for MPA local communities, and contribute to wild stock enhancement, as an alternative to overfishing and for providing services to the ecosystem. * This study showed that there is a need from both aquaculture and MPA sides for clarity of objectives and willingness for open and extensive dialogue. The paper concludes by describing a number of tools and methods for supporting greater synergies between aquaculture and MPAs. * The results from this work have already helped to build a common understanding between conservation and aquaculture and initiate a rapprochement for increasing synergies.

Résumé: Ostreid herpesvirus 1 (OsHV-1 mu var) infection has caused significant mortalities in juvenile oysters (Crassostrea gigas). In contrast to the practices of other animal production industries, sick and dead oysters are not separated from live ones and are left to decay in the surrounding environment, with unknown consequences on fluxes of dissolved materials. A laboratory approach was used in this study to test the influence of oyster mortality episode on dissolved inorganic fluxes at the oyster interface, dissociating (i) the effect of viral infection on metabolism of juvenile oysters and (ii) the effect of flesh decomposition on oxygen consumption and nutrient releases at the individual scale. Nine batches of juvenile oysters (Individual Total wet weight 1 g) were infected via injection of OsHV-1 enriched inoculums at different viral loads (108 and 109 OsHV-1 DNA copies per oyster) to explore infection thresholds. Oysters injected with filtered seawater were used as controls (C). Oysters were maintained under standard conditions to avoid stress linked to hypoxia, starvation, or ammonia excess. Before, after the injection and during the mortality episode, i.e. at days 1, 3, 7, 10 and 14, nine oysters per treatment were incubated in individual metabolic chambers to quantify oxygen, ammonium and phosphate fluxes at the seawater-oyster interface. Nine empty chambers served as a reference. Injections of the two viral loads of OsHV-1 induced similar mortality rates (38%), beginning at day 3 and lasting until day 14. The observed mortality kinetics were slower than those reported in previous experimental pathology studies, but comparable to those observed in the field (Thau lagoon, France). This study highlights that oxygen and nutrient fluxes significantly varied during mortality episode. Indeed (i) OsHV-1 infection firstly modifies oyster metabolism, with significant decreases in oxygen consumption and ammonium excretion, and (ii) dead oysters lead to a strong increase of ammonium (6 fold) and phosphate (41 fold) fluxes and a decrease in the N/P ratio due to mineralisation of their flesh. The latter may modify the structure of the planktonic community in the field during mortality episode. This study is a first step of the MORTAFLUX program. The second step was to in situ confirm this abnormal nutrient loading during a mortality episode and show its impact on bacterio-, phyto-and protozoo-plankton. (C) 2017 Elsevier B.V. All rights reserved.

Résumé: The Thau lagoon, located at the South of France, provides 10% of the French pacific oyster Crassostrea gigas production. Despite this intensive shellfish production, the larval recruitment of this species within the Thau lagoon is still misunderstood and spat collection remains highly variable; as a consequence, shellfish farmers rely mostly on hatchery”s spat. The present study aimed to describe reproduction features of C. gigas within the Mediterranean, as well as to explore spawning triggers of this species. To achieve this goal, the reproduction cycle from gametogenesis to spawning was followed during two years in several locations within the Mediterranean Thau lagoon. The spawning behavior of C. gigas within the Thau lagoon appeared to be slightly different from the one of the Atlantic Coast, showing several spawning events from June to October. The minimal temperature for massive spawning was 23 °C, which is much higher than temperatures mentioned in the literature for this species. A strong relationship was found between phytoplankton communities and gametogenesis, the latter being improved by a higher diatom/dinoflagellate ratio. Temperature was insufficient alone to explain spawning, highlighting other potential triggers such as the moon or lightning strikes. We made the hypothesis of a hierarchy of events triggering spawning, encompassing locking, synchrony and intensifying triggers.
Statement of relevance
This paper is filling in a gap in the literature regarding to reproduction of C. gigas in the Thau lagoon, which is always associated to temperature. However, temperature may not be the only factor involved in oyster reproduction, that is what we tried to show in this paper.

2016

Résumé: Vulcanodinium rugosum, a recently described species, produces pinnatoxins. The IFR-VRU-01 strain, isolated from a French Mediterranean lagoon in 2010 and identified as the causative dinoflagellate contaminating mussels in the Ingril Lagoon (French Mediterranean) with pinnatoxin-G, was grown in an enriched natural seawater medium. We tested the effect of temperature and salinity on growth, pinnatoxin-G production and chlorophyll a levels of this dinoflagellate. These factors were tested in combinations of five temperatures (15, 20, 25, 30 and 35 °C) and five salinities (20, 25, 30, 35 and 40) at an irradiance of 100 µmol photon m−2 s−1. V. rugosum can grow at temperatures and salinities ranging from 20 °C to 30 °C and 20 to 40, respectively. The optimal combination for growth (0.39 ± 0.11 d−1) was a temperature of 25 °C and a salinity of 40. Results suggest that V. rugosum is euryhaline and thermophile which could explain why this dinoflagellate develops in situ only from June to September. V. rugosum growth rate and pinnatoxin-G production were highest at temperatures ranging between 25 and 30 °C. This suggests that the dinoflagellate may give rise to extensive blooms in the coming decades caused by the climate change-related increases in temperature expected in the Mediterranean coasts.

2014

Résumé: Although spatial studies of diseases on land have a long history, far fewer have been made on aquatic diseases. Here, we present the first large-scale, high-resolution spatial and temporal representation of a mass mortality phenomenon cause by the Ostreid herpesvirus (OsHV-1) that has affected oysters (Crassostrea gigas) every year since 2008, in relation to their energetic reserves and the quality of their food. Disease mortality was investigated in healthy oysters deployed at 106 locations in the Thau Mediterranean lagoon before the start of the epizootic in spring 2011. We found that disease mortality of oysters showed strong spatial dependence clearly reflecting the epizootic process of local transmission. Disease initiated inside oyster farms spread rapidly beyond these areas. Local differences in energetic condition of oysters, partly driven by variation in food quality, played a significant role in the spatial and temporal dynamics of disease mortality. In particular, the relative contribution of diatoms to the diet of oysters was positively correlated with their energetic reserves, which in turn decreased the risk of disease mortality.

Résumé: We present the first large-scale, high-resolution spatial and temporal pattern of disease mortality caused by Ostreid herpesvirus 1 (OsHV-1) that has affected Pacific oyster Crassostrea gigas in France every year since 2008, in relation to local farm use. Mortality was monitored in healthy oyster spat deployed at 106 locations in the Thau Mediterranean lagoon during the epizootic that occurred in spring 2011. We conducted a field survey of farming practices in the areas where the sentinel oysters were placed before the epizootic. We found that the risk of disease mortality in sentinel oysters was higher within the bivalve farming area than outside it, suggesting that the infection pressure is much higher in areas with intensive farming activity. The risk of mortality was higher in farms rearing spat, a developmental stage particularly susceptible to OsHV-1, than in farms rearing adult oysters, which are generally more resistant. Additionally, the mortality risk in farms rearing adult animals was similar to that in empty farms, which suggests that, during the study period, adult oysters did not vector the disease. Interestingly, the mortality risk for sentinel oysters deployed in mussel Mytilus galloprovincialis farms was lower than for those held in oyster farms or empty farms, suggesting that mussels reduced the infection pressure on susceptible oysters.

2013

Résumé: The current onshore aquaculture trend is to develop large scale production of diversified fingerlings and very large units for fish ongrowing. This requires an industrial type of approach including quality assurance and minimization of failures in addition to management of bio-technical and economic aspects. Therefore, all the key biological mechanisms involved in Recirculating Aquaculture Systems (RAS) need to be better understood, especially those determining the development of bacterial populations and their interactions with fish. This review presents new knowledge on bacterial community compositions in various parts of RAS and on bacterial-fish interactions in RAS, which constitute essential tools for system management. (C) 2012 Elsevier B.V. All rights reserved.

2010

Résumé: The dual objective of sustainable aquaculture, i.e., to produce food while sustaining natural resources is achieved only when production systems with a minimum ecological impact are used. Recirculating aquaculture systems (RASs) provide opportunities to reduce water usage and to improve waste management and nutrient recycling. RAS makes intensive fish production compatible with environmental sustainability. This review aims to summarize the most recent developments within RAS that have contributed to the environmental sustainability of the European aquaculture sector. The review first shows the ongoing expansion of RAS production by species and country in Europe. Life cycle analysis showed that feed, fish production and waste and energy are the principal components explaining the ecological impact of RAS. Ongoing developments in RAS show two trends focusing on: (1) technical improvements within the recirculation loop and (2) recycling of nutrients through integrated farming. Both trends contributed to improvements in the environmental sustainability of RAS. Developments within the recirculation loop that are reviewed are the introduction of denitrification reactors, sludge thickening technologies and the use of ozone. New approached towards integrated systems include the incorporation of wetlands and algal controlled systems in RAS. Finally, the review identifies the key research priorities that will contribute to the future reduction of the ecological impact of RAS. Possible future breakthroughs in the fields of waste production and removal might further enhance the sustainabilty of fish production in RAS. (C) 2010 Elsevier B.V. All rights reserved.

Résumé: During 84 days, the effects of density on juvenile sea bass (Dicentrarchus labrax) (76 +/- 16 g) were studied in an experimental tank-based flow through system. Performance, stress response and resistance to virus infection were analysed under five stabilized rearing densities: 10, 20, 40, 70 and 100 kg m(-3). Water quality parameters (CO2, total ammonia nitrogen and O-2) were measured and maintained close to the recommended values for farmed sea bass by adjusting water renewal exchange. No significant differences were observed between density treatments, neither on stress response (cortisol) nor susceptibility to nodavirus. With regards to biological performances, the daily feed intake and specific growth rate were significantly lower in fish reared at the 100 kg m(-3) density. Results on the effects of density in sea bass reared in flow through (present study) and in recirculating aquaculture systems (RAS) (Sammouth et al. 2009) were compared as a contribution to the identification of density not affecting health and welfare in farmed sea bass.

2009

Résumé: Over the last few decades, European fish culture was developed mainly as a intensive monospecific activity. In most countries, marine aquaculture cannot continue to develop on the shore line where it first settled due to high competition with other activities. It has now to move either offshore or into recirculation systems located in less occupied spaces. Fresh water availability and impact of fish production farms on the environment are strongly restraining the development of the activity, which is even declining in some countries such as France. Recirculation systems make it possible to decrease water consumption and facilitate waste treatment. Their economical feasibility is being demonstrated and they offer an alternative to developing fish farms. Whatever the rearing system, nutrients of feed are partially converted into fish flesh and most of them are thrown back as wastes into the environment. Integrated systems make it possible to convert such nutrients into algae, molluscs or fish and to release purified water. This article presents some aspects of the development of three types of rearing systems which are increasingly used in northern Europe: offshore cage culture, recirculation systems and integrated systems.

Résumé: Life Cycle Assessment(LCA) was applied to evaluate the global environmental impact of two scenarios of trout production systems based on the operational information from an operational farm using a flow through system (FFF) and an experimental pilot low head recirculating system (RSF) located on the same site. The main differences between the environmental balances of the two systems were relative to water use, eutrophication potential and energy use. Independently of the system used, feed is the key indicator in determining the environmental balance (notwithstanding eutrophication potential and water dependence) monitored by fish production, chemical products, buildings and energy consumption. Consequently, when considering the RSF with a lower feed conversion ratio (0.8 versus 1.1 for FTF), the environmental balance of the RSF is more favourable at both global and regional levels, except with regards to energy use. RSF water dependence is 93% lower than the FTF and its eutrophication potential is 26-38% lower due to reduced waste release. On the other hand, at 57,659 MJ per ton of fish produced ( 16 kWh per kg), the RSF consumes 24-40% more energy than the FTF, especially for aeration and water treatment. Nevertheless, the RSF has significant potential for energy reduction through improvements to airlift and biofilter designs which Would reduce RSF energy use to a level similar to that of the FTF (34,869-43,841 MJ per ton of fish produced, corresponding to 10 and 12 kWh respectively). LCA is therefore a powerful tool which can be used on fish farms to define and prioritise the most promising potential improvements to the system. (C) 2008 Elsevier B.V. All rights reserved.

Résumé: The objective was to compare water quality and fish growth and mortality in a pilot scale recirculating system (RS) and a control tank in flow through system (FTS). The RS was designed after the Danish Model Trout Farm and operated with a make Lip Water renewal rate of 9 m(3) kg(-1) of fish produced. RS water quality did not decrease significantly with water flow rate decrease in the RS. During the experiment, the RS water treatment system presented solids removal efficiency of 59.6 +/- 27.7% d(-1), ammonia oxidation of 45 +/- 32 g m(-3) d(-1), oxygenation yield of 392 +/- 132 g of O-2 kWh(-1) and CO2 degassing of 23.3 +/- 11.9% pass(-1). In the RS, nitrite concentration was 0.15 +/- 0.07 mg l(-1), close to the toxicity threshold; a N-2 supersaturation phenomenon was measured, probably due to the air injection depth. The biofilter and sedimentation area management has to be improved to avoid Organic matter decomposition and release of dissolved elements. Even if no N-2 over-saturation apparent effect on fish performance and aspect were detected, the airlift depth has to be modified in the case of industrial development of the RS. Some improvements of the water treatment system, especially on the airlift and sedimentation area, are suggested. Concerning fish growth, no significant differences were observed between the RS and the FTS. No pathologies were detected and cumulative mortality rates (0.1%) were similar to the farm's Usual data. There were no significant effects of water flow rate decrease in the RS on fish performance and energy savings were recorded to be 0.7 kWh kg(-1) of fish produced between RS1 and RS2. The global energy cost of the RS was 3.56 kWh kg(-1) of fish produced (0.107 (sic) kg(-1) of fish produced). Even if the energy consumption of the water treatment system can be improved, the results confirm that recirculating system can be used for industrial trout On growing, without fish performance deterioration. (C) 2009 Elsevier B.V. All rights reserved.

Résumé: The objective of this study was to compare fish performance and welfare at different stocking densities in a recirculating system (RS) and a flow through system (FTS) under field conditions. During the 77 days experiment, the fish survival rate was high (99.3%) and stocking density increased from 57 to 98108 kg m(-3). No significant differences in growth were observed between RS and FTS until day 56. Later, growth decreased in the FTS, while it remained similar to the farm reference at 50 kg m(-3) in the RS. Final weight was 17% higher in RS than in FTS. The maximum carrying capacity of the RS was near 100 kg m(-3), limited by NO2 increase up to safe level at the end of the experiment, the maximum carrying capacity of the FTS was near 85 kg m(-3), probably limited by CO2 concentration (17.8 +/- 5.7 mg l(-1)). In the RS, the relative length index of pectoral and dorsal fins was lower than in the FTS, which may be attributed to the tank hydrodynamics. In both systems, an improvement of the pectoral and dorsal profile was observed at the end of the experiment, attributed to a swimming activity reduction that may have decreased contact between individuals. In the RS, high caudal fin deterioration (50% versus 20% in FTS) was observed irrespective of stocking density, that could be linked to the highest water velocity modifying the fish swimming activity. The results confirm that when water quality is maintained in safe level ranges, high densities can be used in trout RS without fish performance and pectoral or dorsal fin deterioration, but with a major caudal impairment. (C) 2008 Elsevier B.V. All rights reserved.

Résumé: Sea bass (Dicentrarchus tabrax) (135 +/- 4 g) were reared under tank-based recirculating aquaculture system for a 63-day period at four densities: 10, 40, 70, 100 kg m(-3). Fish performance, stress indicators (plasma cortisol, proteonemia plus other blood parameters-Na+, K+, glucose, pH, total CO2- and water quality were monitored. At the end of the 63-day period, resistance to infection was also studied by a nodavirus challenge. A 25-day test was performed on fish from two extreme densities (10 and 100 kg m(3)) and one intermediate density (40 kg m(3)). With regards to the different density treatments, there was no significant difference between the daily feed intake (DFI) and the specific growth rate (SGR) up to a density of 70 kg m(-3). No significant difference was found between treatments concerning the feed conversion ratio (FCR) and the mortality rate. No density effect was observed on the fish stress level (plasma cortisol) or on sensitivity to the nodavirus challenge. Under these experimental rearing conditions, the density above 70 kg m(-3) has an impact on growth performance (DFI and SGR) indicators and also some blood parameters (CO2) at the highest density tested (100 kg m(-3)). This study suggests that a density up to 70 kg m(-3) has no influence on sea bass performance and welfare. At 100 kg m(-3), average specific growth rate was decreased by 14% without welfare deterioration according to the welfare indicators monitored. (C) 2008 Elsevier B.V. All rights reserved.

2008

Résumé: European water legislation enforces increasingly restrictive measures with regards to reduction of water consumption and waste emission in order to minimise the potential environmental impact of the agro industry sector. Fish farms are particularly concerned, but legislation covering effluent discharge varies significantly from country to country. However, recommendations and directives from institutional, national or regional bodies suggest the enforcement of increasingly strict waste reduction measures and the development of waste treatment. Before treatment, it is necessary to evaluate waste production in terms of composition and quantity. The waste quantification methods used today for fish culture systems are either based on direct measurements of nutrient and suspended solid fluxes or on indirect evaluation based on the digestibility coefficients of the feed constituents. The objective of the present study is to evaluate the waste of a freshwater flow through farm using both approaches and to discuss their applicability, drawbacks and advantages from the viewpoints of fish farmers and control authorities. Waste production on the farm was monitored during several 24 hour cycles in order to characterise the effluents of the system. The predictions and measurements for the total nitrogen (TN) parameter were well correlated, but measured and predicted suspended solids (SS) and total phosphorus (TP) values presented a weaker correlation coefficient. The hydrobiological method gives details on the N and P forms of waste but this method is heavy and it is difficult to obtain representative samples and flow rate measurements. The nutritional method is the simplest to use, provided that feed data are available. (C) 2007 Elsevier B.V. All rights reserved..