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WP1: Physical mapping Of wheat group 1 and 3 chromosomes Construction of BAC libraries Fingerprinting of BAC libraries Assembly of BAC contigs BAC libraries pooling from the MTP and rearraying for BES (by INRA-CNRGV) BAC end sequencing of the MTPs for marker development and genome analysis

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WP2: Physical maps anchoring Of wheat and barley group 1 and 3 chromosomes Establishment of a marker repository: including only markers for which sequences are available Generating resources for high resolution genetic mapping: For wheat, creation of a population of CS x Re RILs of about 2000 plants. For barley, creation of Morex x Barke RILs. Anchoring BAC contigs to chromosomes by high throughput screening methods: forward and reverse anchoring Comparative genetic and physical mapping with other grass genomes

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WP4: Molecular markers for breeding WP leading by the breeding companies Development of trait specific markers: using markers from WP1 (BAC end sequencing) and WP2 Establishment of an European diversity panel for association mapping: panel contains 730 varieties (171 from UK, 178 from Germany and 381 from France) The data generated will be useful for all the chromosomes.

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WP5: Bioinformatics tools and databases For wheat and barley Development of a web interface integrating genetics and physical maps Development of a new analytical framework for contig assembly: LTC (more robust than FPC) Development of comparative genome informatics tools: with Brachypodium, rice, sorghum, etc… Development of a new version of TriAnnot pipeline for automated sequence annotation

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WP6: Dissemination, technology transfer and training Organisation of 9 training courses in the different partners instituts http://www.triticeaegenome.eu/ http://www.triticeaegenome.eu/ Development of the Project website http://www.triticeaegenome.eu/ http://www.triticeaegenome.eu/ Dissemination at scientific and technological events: talks/posters, production of a project leaflet and a poster

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WP7: Project Management Scientific and technical management Administrative and financial management: organization of the different project meetings, monitoring of the project costs Communication and interactions between partners and other projects: establishment of a Collaborative Platform, interaction with the Triticeae Genomics Network (TGN) Technical and financial reporting to the EC : detailed reports that describe the work progress, costs incurred and other justifications for the reimbursement of project costs