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Eitan was born in kibbutzEin Harod during the Mandate era. His parents were Zionist immigrants from Russia in 1923. His father Noach Hantman was a farmer and poet and his mother Yehudit Volwelsky, a social activist. They had four children, Rafi, Oded, Rina and Ami (Yechiam) and lived in Ramat HaSharon, a small settlement of 100 families. Eitan went to a regular junior high public school, but finished his high school at the Agricultural School in Givat HaShlosha in 1940 before going to the London School of Economics for his BSc in Economics.

At age 12, engulfed in the prevalent Zionist sentiments of the day and to defend his settlement from Arab attacks, Eitan joined the Haganah from which he moved to the Palmach, the elite unit of the Haganah, upon completion of high school in 1944. Through clandestine operations, he was to assist the illegal immigration of Jewish refugees from Europe, who were fleeing Nazism, into Palestine. His most famous operation at this time was blowing up the British radar on Mount Carmel near the port city of Haifa. To reach it, Eitan had to crawl underground through sewers, thus earning the name 'Rafi the Smelly', which would differentiate him in later years from the other Rafael Eitan, a well-known Israeli Chief of Staff and politician. It was also during this time that he met Yitzhak Rabin, who would later become Israeli Prime Minister.

During the 1948 Arab–Israeli War, Eitan served in Army intelligence, from where he was propelled to commanding posts in the internal intelligence agency (Shin Bet). Later, Eitan served as Chief of Coordination between Shin Bet and Mossad. This position would allow him the biggest triumph in a post-Holocaust Israel: the capture of Adolf Eichmann. In a daring mission, after much intelligence research recognized Adolf Eichmann alive and well, and living in Argentina, Eitan and his team went to Argentina to kidnap and take him to Israel, where he was tried and found guilty of atrocious crimes against the Jewish people during World War II. During the process of capturing Eichmann, Eitan personally vetoed the capture of Josef Mengele, who was under Mossad surveillance, arguing that the eventual loss of focus could jeopardize the Eichmann mission.[1]

During 1964-1966, Eitan headed a two-year operation in which armaments sold and delivered by the Germans to the Egyptian government 'disappeared'. In those days, Israel had no peace treaty with Egypt.

In 1968 Eitan, listed as an Israeli Ministry of Defense chemist, visited the U.S. Nuclear Materials and Equipment Corporation (NUMEC) nuclear fuel plant, where later it is alleged 200 pounds of highly enriched uranium disappeared and was diverted to Israel in an event known as The Apollo Affair.[2]

Eitan was also involved in the secret planning and implementation of the attack on the IraqiOsirak nuclear reactor in June 1981. In June 1984 Eitan initialed an espionage operation against the United States where-in he recruited Naval Intelligence Analyst Jonathan Jay Pollard to steal American top secret material. The operation lasted eighteen months and was shut down after the arrest of Pollard, who was sentenced to life in American federal prison, but was released after serving 30 years on November 20, 2015.[3]

Eitan continued his work in intelligence until 1972, when he left the organization and went on to the private sector, raising tropical fish and other agricultural ventures. But in 1978, the government of Menachem Begin, the then Prime Minister of Israel, called him back to be his advisor on terrorism, as Eitan was regarded and admired as one of the most respected experts in this field. In 1981, Eitan was named head of the Defense Ministry's Lekem, the Bureau for Scientific Relations, replacing legendary Israeli spy-master Benjamin Blumberg, where he continued work on counter-terrorism. According to the British journalist, Gordon Thomas, Eitan then participated in a partnership between Israeli and U.S. intelligence during the early 1980s in selling to foreign intelligence agencies in excess of $500 million worth of licenses to a trojan horse version of the Washington, D.C.-based, Inslaw Inc.'s people-tracking software called Promis, in order to spy on them.[4] In 1984, Lekem was put in touch with Jonathan Pollard, an American citizen, who worked on anti-terrorist activities at the US Naval Investigative Services. Pollard had contacted the Israeli government with top secret information on the terrorist activities of Israel's enemies. Jonathan Pollard was exposed and arrested in the US in 1985. His arrest revealed the existence of Lekem to US authorities.

Also in 1985 In California, a US Aerospace Engineer, Richard Kelly Smyth, the President of a company called MILCO, was indicted for smuggling over 800 krytron to Israel without the required US State Department Munitions Export License.Because of their potential for use as triggers of nuclear weapons, the export of krytrons is tightly regulated in the United States. A number of cases involving the smuggling or attempted smuggling of krytrons have been reported, as countries seeking to develop nuclear weapons have attempted to procure supplies of krytrons for igniting their weapons. Just before trial, and facing a possible 105 years in prison, Richard Kelly Smyth and his wife suddenly disappeared. Sixteen years later they were discovered and arrested while living as fugitives in Malaga, Spain, and extradited back to the United States where he was convicted in the case. The krytrons shipped by Smyth were sent to an Israeli company called Heli-Trading Ltd. owned by prominent Israeli movie producer Arnon Milchan (the producer of Pretty Woman, JFK, LA Confidential, Once Upon a Time in America, Brazil, Fight Club, Mr. and Mrs. Smyth… and many more movies). Before his prominent Hollywood career, Mr. Milchan had served for decades as a Lekem agent, under the direct command of Rafi Eitan's predecessor, Benjamin Blumberg. It later became clear that the company MILCO served as a Lekem front company for obtaining sensitive equipment, technologies and materials for Israeli secret defense-related programs, and in particular its nuclear program.[5]

The Israeli government asserted that the MILCO Krytron incident was a simple mistake by the "exporter" Milco, and that the Pollard operation was an unauthorized deviation from its policy of not conducting espionage in the United States, before an admission in 1998 of Israeli responsibility. In 1987 the Israeli government set up a commission to investigate Lekem's failure, which found it would be in Israel's interest to take responsibility for the Pollard case. In 1987 following the difficult Pollard and Milco cases, the Israeli government decided to disband Lekem, whose functions were assigned to the Director of Security of the Defense Establishment, adding technical and scientific intelligence to its responsibilities which include internal investigations of the defense ministry.

Following the disbandment of Lekem, Eitan was offered the position as head of the state-owned Israel Chemicals Corporation, from where he retired in 1993 at the age of 67. During his tenure, the company underwent a rapid expansion in terms of sales, development and manpower making it the largest government-held firm in the country.

Further revelations from the book Gideon's Spies:The Secret History of the Mossad by Gordon Thomas, describe how the Thatcher government in Britain during the mid-1980s developed a relationship with Eitan as an advisor to MI6 on counterterrorism operations in Northern Ireland. This relationship came to a head in 1985, when Mossad agents helped track an IRA bomb team in Gibraltar. The three member IRA team was killed by the British SAS, under highly controversial circumstances. It was subsequently reported in British papers that Rafi Eitan and Mossad had played a surveillance role in the operation, and IRA command put out orders for assassination teams in Ireland and Britain to find and kill Rafi Eitan. Due to this threat of assassination, and the embarrassment of the Israeli government over Eitan's unauthorized relationship with the operation, Eitan left Britain and ended his relationship with Britain's intelligence services. This incident strained Israeli/British relations for several years.[4]

In 1992, Eitan was approached in order to bid on a contract for an agricultural deal in Cuba, which involved the cultivation of the largest citrus grove cooperative on the island. After winning the bid, Eitan built a partnership with four other international entrepreneurs to run the deal. The company BM Group was incorporated in Panama, and traded with Israeli suppliers.

Due to the success of the venture and the connections acquired, BM also won the contract to build the world trade center in Havana, and a Holocaust Memorial at the center of the Old City of Habana. Recently, GBM was awarded the "Medal for Agricultural Work" by the Cuban government.

In addition to this deal, BM has started expanding its business deals to the rest of Latin America. It runs various agricultural projects in the Dominican Republic, among others.

Eitan was asked to represent the pensioners' party Gil in the 2006 Knesset elections. The party went on to win a large number of seats (7), despite predictions that it would not secure more than 2-3, at best, and would not pass the vote threshold, at worst. In the 2009 elections the party failed to cross the electoral threshold, and Eitan lost his seat.

In February 2010, Eitan remarked "In principle, when there is a war on terror you conduct it without principles. You simply fight it.".[6]

Eitan enjoys good health and claims to be nowhere near retirement. In his spare time, he is known as an avid sculptor. Over the 30 years that he has been sculpting, Eitan has produced over 100 pieces. He recently had a one-man show at the offices of the high-tech company "Brown".