You will then need to do a full rebuild. The easiest thing to do is redo the whole run as follows:

rose suite-run --new

We will update this in the reference suite.

Note there have been problems with the ARCHER serial nodes today, and I'm not sure they are resolved yet, so it is probably best to wait for the all clear from ARCHER before resubmitting. (You should have received an email earlier today about this - if not check your email notification settings in SAFE).