Background: As it becomes increasingly possible to obtain DNA sequences of orthologous genes from diverse sets of taxa, species trees are frequently being inferred from multilocus data. However, the behavior of many methods for performing this inference has remained largely unexplored. Some methods have been proven to be consistent given certain evolutionary models,...

Organellar DNA sequences are widely used in evolutionary and population genetic studies; however, the conservative nature of chloroplast gene and genome evolution often limits phylogenetic resolution and statistical power. To gain maximal access to the historical record contained within chloroplast genomes, we have adapted multiplex sequencing-by-synthesis (MSBS) to...

The term ?natural fibers? covers a broad range of vegetable, animal, and mineral fibers. However, in the composites industry, it usually refers to wood fiber and plant-based bast, leaf, seed, and stem fibers. These fibers often contribute greatly to the structural performance of the plant and, when used in plastic composites, can provide significant reinforcement....

Conifers are the dominant plant species throughout the high latitude boreal forests as well as some lower latitude temperate forests of North America, Europe, and Asia. As such, they play an integral economic and ecological role across much of the world. This study focused on the characterization of needle transcriptomes from four ecologically important and...

The mysterious death of redbay Persea borbonia (L.) Spreng.) trees on Hilton Head Island, South Carolina, and surrounding areas was first reported in local newspapers in 2003. Thousands of redbays were dying in the low country of South Carolina, and by the end of 2004 officials on Hilton Head were estimating that they had lost 75-80% of the island...

Armillaria species range from beneficial saprobes to damaging root pathogens, and their ecological roles and impacts vary with environment and host. Armillaria solidipes [pending vote to conserve A. ostoyae . (Redhead et al. 2011 )] is known as an aggressive pathogen of conifers and causes tree mortality and significant growth loss in Wyoming and throughout...

Phylogeographic and population genetic screens of chloroplast DNA (cpDNA) provide insights into seedbased gene flow in angiosperms, yet studies are frequently hampered by the low mutation rate of this genome. Detection methods for intraspecific variation can be either direct (DNA sequencing) or indirect (PCR-RFLP), although no single method incorporates the best...

Composites of wood in a thermoplastic matrix (wood?plastic composites) are considered a low maintenance solution to using wood in outdoor applications. Knowledge of moisture uptake and transport properties would be useful in estimating moisture-related effects such as fungal attack and loss of mechanical strength. Our objectives were to determine how material...

Bark beetles (Coleoptera: Curculionidae: Scolytinae) are mortality agents to multiple tree species throughout North America. Understanding spatiotemporal dynamics of these insects can assist management, prediction of outbreaks, and development of "real time" assessments of forest susceptibility incorporating insect population data. Here, dispersal of Douglas-...

The objective of this study was to model the influence of temperature and precipitation on the distribution and abundance of the ambrosia beetles in the genus Trypodendron. Although these beetles do not attack and kill healthy trees, their gallery holes and accompanying black and gray stain associated with symbiotic ambrosial fungi can cause significant economic losses...

The laurel wilt pathogen Raffaelea lauricola was hypothesized to have been introduced to the southeastern USA in the mycangium of the redbay ambrosia beetle, Xyleborus glabratus, which is native to Asia. To test this hypothesis adult X. glabratus were trapped in Taiwan and on Kyushu Island, Japan, in 2009, and dead beetles were sent to USA for isolation of fungal...

Large population sizes and global distributions generally associate with high mitochondrial DNA control region (CR) diversity. The sperm whale (Physeter macrocephalus) is an exception, showing low CR diversity relative to other cetaceans; however, diversity levels throughout the remainder of the sperm whale mitogenome are unknown. We sequenced 20...

Disturbances are natural and essential components of healthy ecosystems, but their ecological roles in the maintenance of endemic conditions for an area (that is, long-established levels of activity that are of low magnitude and relatively static intensity and cause unnoticed or relatively low amounts of tree killing, defoliation, or deformation) are poorly understood...

Forest health issues are on the rise in the United States, resulting from introduction of alien pests and diseases, coupled with abiotic stresses related to climate change. Increasingly, forest scientists are finding genetic/genomic resources valuable in addressing forest health issues. For a set of ten ecologically and economically important native hardwood tree...