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We want to even go even further and add reproducible elements to JATS documents. We are working together with Stencila on extending Texture to allow both textual narrative and executable code to coexist in one document.

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Annotators

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At one point, Pérez told me the name Jupyter honored Galileo, perhaps the first modern scientist. The Jupyter logo is an abstracted version of Galileo’s original drawings of the moons of Jupiter. “Galileo couldn’t go anywhere to buy a telescope,” Pérez said. “He had to build his own.”

At every turn, IPython chose the way that was more inclusive, to the point where it’s no longer called “IPython”: The project rebranded itself as “Jupyter” in 2014 to recognize the fact that it was no longer just for Python.

This is quite confusing. The interface remembers my tag, but not the content of my annotation.

It does not seem to allow the application of an annotation to text inside of an iframe. This prevents proper testing of hypothes.is as a jupyter notebook annotation tool.

In some ways it's great, but the interface and user model could use a lot of work. If it allowed annotations inside iframes I'd gladly navigate those rough edges. But without that feature it's hard to justify trying to use this for the purpose of annotating notebooks.

Hopefully, this can be fixed, in which case I'll edit this annotation to acknowledge that annotation inside iframes works. That would mean the annotation of Jupyter notebooks would be be a process capable of supporting code review on a notebook via GitHub.