Panorama is a freely-available, open-source repository server application for targeted mass spectrometry assays that integrates into a Skyline mass spec workflow. It has been implemented as a module within LabKey Server, an open-source bioinformatics data management platform with extensive support for proteomics and small molecule data and a security model rich enough to support clinical studies.

Panorama was developed with the following goals for targeted proteomics investigation:

Help labs aggregate curated results

Store the complete Skyline document data model

Use previous experiments to inform new experiments

Make it easy to search and review a large body of experiments

Facilitate sharing results

Keep private data secure

Panorama was designed to integrate with existing Skyline workflows. Users can publish their documents to a Panorama server directly from Skyline. Data on the server can be organized in folders, and users can take advantage of LabKey Server's fine-grained permission controls to securely share data with collaborators, or make it publicly available. You can browse through some of the example experiments below to explore the Panorama UI for published Skyline documents.

PanoramaWeb is a public Panorama server hosted at the University of Washington where laboratories and organizations can own free projects. You can request a project on this server to find out what Panorama has to offer, without having to set up and maintain your own LabKey Server. You will be able to explore all the available features in Panorama, and be given administrative rights to your project so that you can set up folders and configure permissions. The LabKey Server security infrastructure will allow you to keep your data as private as you want or release it publicly when you are ready.

Panorama can also be installed by laboratories and organizations on their own servers. Look at Install Panorama to get started.