Fusion

STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:query proteins and first shell of interactors

white nodes:second shell of interactors

Node Content

empty nodes:proteins of unknown 3D structure

filled nodes:some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

slr1896

Hypothetical protein (130 aa)

Predicted Functional Partners:

ssl1263

Hypothetical protein (80 aa)

0.775

sll0662

Bacterial type ferredoxin family protein (133 aa)

0.760

slr1660

Hypothetical protein (192 aa)

0.751

ycf35

Conserved hypothetical protein Ycf35 (128 aa)

0.743

psb27

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits (135 aa)

0.740

sll0860

Hypothetical protein (173 aa)

0.732

sll1071

Hypothetical protein (275 aa)

0.730

ssl0105

Hypothetical protein (88 aa)

0.726

pcyA

Hypothetical protein; Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin (248 aa)

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1

node2

node1 accession

node2 accession

node1 annotation

node2 annotation

score

pcyA

sll0860

SYNGTS_2691

SYNGTS_1052

Hypothetical protein; Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin

Hypothetical protein

0.771

pcyA

sll1071

SYNGTS_2691

SYNGTS_0735

Hypothetical protein; Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin

Hypothetical protein

0.595

pcyA

slr0249

SYNGTS_2691

SYNGTS_0139

Hypothetical protein; Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin

Hypothetical protein

0.755

pcyA

slr1660

SYNGTS_2691

SYNGTS_3073

Hypothetical protein; Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin

Hypothetical protein

0.676

pcyA

slr1896

SYNGTS_2691

SYNGTS_0779

Hypothetical protein; Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin

Hypothetical protein

0.726

psb27

sll0662

SYNGTS_1888

SYNGTS_2796

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

Bacterial type ferredoxin family protein

0.659

psb27

sll0860

SYNGTS_1888

SYNGTS_1052

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

Hypothetical protein

0.598

psb27

sll1071

SYNGTS_1888

SYNGTS_0735

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

Hypothetical protein

0.790

psb27

slr0249

SYNGTS_1888

SYNGTS_0139

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

Hypothetical protein

0.758

psb27

slr1660

SYNGTS_1888

SYNGTS_3073

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

Hypothetical protein

0.498

psb27

slr1896

SYNGTS_1888

SYNGTS_0779

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

Hypothetical protein

0.740

psb27

ssl0105

SYNGTS_1888

SYNGTS_2319

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

Hypothetical protein

0.697

psb27

ssl1263

SYNGTS_1888

SYNGTS_2798

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

Hypothetical protein

0.709

psb27

ycf35

SYNGTS_1888

SYNGTS_2797

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

Conserved hypothetical protein Ycf35

0.603

sll0662

psb27

SYNGTS_2796

SYNGTS_1888

Bacterial type ferredoxin family protein

Photosystem II 11 kD protein; Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits

0.659

sll0662

sll1071

SYNGTS_2796

SYNGTS_0735

Bacterial type ferredoxin family protein

Hypothetical protein

0.610

sll0662

slr1660

SYNGTS_2796

SYNGTS_3073

Bacterial type ferredoxin family protein

Hypothetical protein

0.547

sll0662

slr1896

SYNGTS_2796

SYNGTS_0779

Bacterial type ferredoxin family protein

Hypothetical protein

0.760

sll0662

ssl1263

SYNGTS_2796

SYNGTS_2798

Bacterial type ferredoxin family protein

Hypothetical protein

0.930

sll0662

ycf35

SYNGTS_2796

SYNGTS_2797

Bacterial type ferredoxin family protein

Conserved hypothetical protein Ycf35

0.970

page 1 of 5

Network Stats

Network Stats analysis is still ongoing, please wait ...

Functional enrichments in your networkNote: some enrichments may be expected here (why?)

Enrichment analysis is still ongoing, please wait ...

Statistical background

For the above enrichment analysis, the following statistical background is assumed: