Not possible at the moment. I'm okay with adding it, but I want to make sure that a mod can't clobber a user's personal keybinds. Especially for users with different keyboard layouts. Maybe we could prompt the user that a mod has some default keybinds and ask if they want to use them.

I remember pre-Flare 1.0 your saves, settings and config files were stored inside the mod folder itself rather than in AppData? Is it possible do that for Keybindings at least? That way when you enable/disable you disable the keybindings for that mod as well.