When I level up with a heavy lifter robot in a certain point the game says that I have new programs for him, but when i see not there any programs in the list. I pick-up the steam version (I don't know If it's different, but I think no)

It's more recently, I just saved Brutus, but the steam not recognized that I did it, there a way to say to steam that Brutus is alive?

This belongs in the support forum (so it'll probably get moved there as soon as one of our pod overlords reads it). The Steam achievement not unlocking is a known bug (though a look at http://steamcommunity.com/stats/MrRobot/achievements shows that at least some people have been able to get it). As for the other problem... not sure.

According to this: http://dev.zr40.nl/steam/game?id=fza only one person ever managed to get the Save Brutus achievement out of the 11718 people who bought it through Steam, and he probably cheated. The achievement in-game registers just fine, but it doesn't get through to Steam like all the rest. Please please please look into this, thanks.