This is a good task to stay updated on so you are aware of possible errors. One possible problem is that this tool really focuses on MyISAM and not InnoDB. If you use it for InnoDB, The "Check table" command really only applies when you add the QUICK option (or no options). The FAST, CHANGED, MEDIUM and EXTENDED options are all ignored for InnoDB. Now, if you are asking yourself, what about InnoDB? Why would MySQL ignore data consistency in the InnoDB engine? Take a deep breath and relax, InnoDB is ACID complaint, ACID is "an acronym standing for atomicity, consistency, isolation, and durability." So do not disregard checking InnoDB tables because it can still provide you some insight or confirmation on your tables. Keep in mind that if an InnoDB table was to be corrupted the server will shut down to protect the data. You just get more bang for your buck with MyISAM tables and this tool.

Hopefully you get a response of "OK" or "Table is already up to date" otherwise you need to run a repair table to fix the table.

So what are the options available to us so you can do this often and easily.
The documentation link below will also provide you with several community driven automatic options. You can script it the process and easily show tables then apply check tables to all of your results. It just appears easier to me though to use the tools provided for you.