Abstract

Hepatitis C is a predominant genotype found throughout the Middle East and parts of Africa, with high population prevalence
in Egypt. Due to the world’s constant effort to find treatment for this fatal disease; many researches and trials have been made.
It has become evident that virus C itself envelopes a self destructive gene [1], which if activated by a specific order to the
mRNA aboard the virus, forms interferon. Interferon is an anti-viral if produced from virus C itself becomes specific only to it.
Through a variety of bioinformatics tools we architect algorithms to enhance the chance of finding this gene which order the
mRNA to produce the virus C specific interferon .Tools such as RNA to protein synthesis, gene prediction, protein
classification and gene classification have been constructed and tried to reach this goal .As a result of these trials, several
matches were made with alternating percentages but at least acknowledging the possibility this interferon/RNA analysis.