"... DNA microarrays are a new and promising biotechnology whichallows the monitoring of expression levels in cells for thousands of genes simultaneously. The present paper describes statistical methods for the identification of differentially expressed genes in replicated cDNA microarray experiments. A ..."

DNA microarrays are a new and promising biotechnology whichallows the monitoring of expression levels in cells for thousands of genes simultaneously. The present paper describes statistical methods for the identification of differentiallyexpressed genes in replicated cDNA microarray experiments

"... SUMMARY In this paper we report exploratory analyses of high-density oligonucleotide array data from the Affymetrix GeneChip R system with the objective of improving upon currently used measures of gene expression. Our analyses make use of three data sets: a small experimental study consisting of f ..."

and (for MBEI and RMA) model fit. Finally, we evaluate the algorithms in terms of their ability to detect known levels of differentialexpression using the spike-in data. We conclude that there is no obvious downside to using RMA and attaching a standard error (SE) to this quantity using a linear model

"... Motivation: DNA microarray experiments generating thousands of gene expression measurements, are being used to gather information from tissue and cell samples regarding gene expression differences that will be useful in diagnosing disease. We have developed a new method to analyse this kind of data ..."

of tissues is achieved, but not with high confidence. We identify and analyse a subset of genes from the ovarian dataset whose expression is highly differentiated between the types of tissues. To show robustness of the SVM method, two previously published datasets from other types of tissues or cells

"... High density oligonucleotide array technology is widely used in many areas of biomedical research for quantitative and highly parallel measurements of gene expression. Affymetrix GeneChip arrays are the most popular. In this technology each gene is typically represented by a set of 11±20 pairs of pr ..."

of the default expression measure provided by Affymetrix Microarray Suite can be signi®cantly improved by the use of probe level summaries derived from empirically motivated statistical models. In particular, improvements in the ability to detect differentiallyexpressed genes are demonstrated.

"... Motivation. Spotted arrays are often printed with probes in duplicate or triplicate, but current methods for assessing differential expression are not able to make full use of the resulting information. Usual practice is to average the duplicate or triplicate results for each probe before assessing ..."

Motivation. Spotted arrays are often printed with probes in duplicate or triplicate, but current methods for assessing differentialexpression are not able to make full use of the resulting information. Usual practice is to average the duplicate or triplicate results for each probe before assessing

"... In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The regulation of gene expression is achieved through genetic regulatory systems structured by networks of interactions between ..."

In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The regulation of gene expression is achieved through genetic regulatory systems structured by networks of interactions between

by
Steven M. Lavalle, James J. Kuffner, Jr.
- THE INTERNATIONAL JOURNAL OF ROBOTICS RESEARCH 2001; 20; 378, 2001

"... This paper presents the first randomized approach to kinodynamic planning (also known as trajectory planning or trajectory design). The task is to determine control inputs to drive a robot from an initial configuration and velocity to a goal configuration and velocity while obeying physically based ..."

dynamical models and avoiding obstacles in the robot’s environment. The authors consider generic systems that express the nonlinear dynamics of a robot in terms of the robot’s high-dimensional configuration space. Kinodynamic planning is treated as a motion-planning problem in a higher dimensional state

"... Content analysis is a widely used qualitative Researchers regard content analysis as a flexible method for analyzing text data The differentiation of content analysis is usually limited to classifying it as primarily a qualitative versus quantitative research method. A more thorough analysis of th ..."

Content analysis is a widely used qualitative Researchers regard content analysis as a flexible method for analyzing text data The differentiation of content analysis is usually limited to classifying it as primarily a qualitative versus quantitative research method. A more thorough analysis