I would like to find some software (free if possible) or online sites with algorithms to analyze DNA sequences (mostly promoter sequences) for consensus transcription binding sites and other sequences of interest. Any suggestions?

Thank you in advance!

-MaximinaNYC-

QUOTE (MaximinaNYC @ May 20 2005, 11:30 AM)

I would like to find some software (free if possible) or online sites with algorithms to analyze DNA sequences (mostly promoter sequences) for consensus transcription binding sites and other sequences of interest. Any suggestions?

Thank you in advance!

hiu can use the site http://www.cbrc.jp/research/db/TFSEARCH.html in this site u have to put ur DNA seq and label it and then select threshold , select the catagory and then press on exe.if it is not working i mean after pressing EXE then give ur DNA without numbering . it will work .U can also use TRANSFAC .but for this u have to resister and this resistration is also free.cheers.