Compounds in the medium listed by their compound names. Gram & Mol amounts are per Liter of medium. Trace metabolites & gases usually do not have amounts

Name

Semi unique name

Unique Name

Gram Amount

Mol Amount

D-Ca-pantothenate

D-Ca-pantothenate

SEED-cpd00063#cpd00644##

4.90E-5

1.90E-7

CaCl2 x 2 H2O

Calcium chloride

SEED-cpd00063#cpd00099##

0.14

0.00

Pyridoxine HCl

Pyridoxine HCl

SEED-cpd00099#cpd00263##

9.80E-5

4.81E-7

KOH

KOH

SEED-cpd00001#cpd00205##

null

null

CuSO4 x 5 H2O

CuSO4

SEED-cpd00048#cpd00058##

9.80E-5

3.93E-7

Thiamine-HCl x 2 H2O

Thiamine-HCl

SEED-cpd00099#cpd00305##

4.90E-5

1.46E-7

NH4Cl

Ammonium chloride

SEED-cpd00013#cpd00099##

0.25

0.00

Fe(NH4)2(SO4)2 x 6 H2O

(NH4)2Fe(SO4)2

SEED-cpd00013#cpd00048#cpd10515#

9.80E-3

2.50E-5

H3BO3

Boric acid

SEED-cpd09225###

9.80E-5

1.58E-6

Na2MoO4 x 2 H2O

Na2MoO4

SEED-cpd00971#cpd11145##

9.80E-5

4.05E-7

NiCl2 x 6 H2O

NiCl2

SEED-cpd00099#cpd00244##

7.84E-4

3.30E-6

MnSO4 x H2O

MnSO4

SEED-cpd00030#cpd00048##

4.90E-3

2.90E-5

MgSO4 x 7 H2O

Magnesium sulfate

SEED-cpd00048#cpd00254##

3.36

0.01

H2O

H2O

SEED-cpd00001###

null

null

Folic acid

Folic acid

SEED-cpd00393###

1.96E-5

4.47E-8

Biotin

Biotin

SEED-cpd00104###

1.96E-5

8.07E-8

sodium dithionite

sodium dithionite

dithionite#

9.80E-3

5.63E-5

NaHCO3

sodium bicarbonate

SEED-cpd00242#cpd00971#cpd09249#

1.47

0.02

KCl

KCl

SEED-cpd00099#cpd00205##

0.32

0.00

Na2S2O3 x 5 H2O

Sodium thiosulphate

SEED-cpd00268#cpd00971##

1.47

0.01

K2HPO4

di Potassium hydrogen phosphate

SEED-cpd00009#cpd00205##

0.14

0.00

Yeast extract

Yeast extract

rich-peptone#

0.10

null

FeSO4 x 7 H2O

Iron sulfate

SEED-cpd00048#cpd10515##

9.80E-4

3.51E-6

Sodium pyruvate

Sodium pyruvate

SEED-cpd00020#cpd00971##

0.49

0.00

sodium lactate

sodium lactate

SEED-cpd00971#cpd01022##

0.49

0.00

Nitrilotriacetic acid

Nitrilotriacetic acid

SEED-cpd10393###

0.01

0.00

Nicotinic acid

Niacin

SEED-cpd00218###

4.90E-5

4.02E-7

Na2SeO3 x 5 H2O

Sodium selenite

SEED-cpd00971#cpd03387##

4.93E-4

1.86E-6

Lipoic acid

Lipoic acid

SEED-cpd00541###

4.90E-5

2.39E-7

CoSO4 x 7 H2O

CoSO4

SEED-cpd00048#cpd00149##

1.76E-3

6.26E-6

p-Aminobenzoic acid

p Aminobenzoic acid (PABA)

SEED-cpd00443###

4.90E-5

3.60E-7

KAl(SO4)2 x 12 H2O

potassium alum

alum#

1.96E-4

4.12E-7

Riboflavin

Riboflavin

SEED-cpd00220###

4.90E-5

1.30E-7

Vitamin B12

Coenzyme B12

SEED-cpd00166###

9.80E-7

6.21E-10

ZnSO4 x 7 H2O

ZnSO4

SEED-cpd00034#cpd00048##

1.76E-3

6.13E-6

NaCl

NaCl

SEED-cpd00099#cpd00971##

29.42

0.51

MgCl x 6 H2O

Magnesium chloride

SEED-cpd00099#cpd00254#cpd04877#

4.10

0.02

Seed Metabolites list

All SEED compounds in the medium, listed with molar concentrations (mol/L). Some SEED compounds appear in multiple
compound names in the 'metabolite list' -- here, they are combined for final molar concentrations.

Seed ID

Name

Mol Concentration

cpd00058

Cu2+

3.9254941215725526E-7

cpd00244

Ni2+

3.2968210403118784E-6

cpd00242

H2CO3

0.01750700280112045

cpd00220

RIBF

1.3037129745515227E-7

cpd00030

Mn2+

2.8979963253406592E-5

cpd09249

Sodium bicarbonate

0.0

cpd00034

Zn2+

6.126387371473498E-6

cpd09225

Boric acid

1.5812776723592662E-6

cpd00013

NH3

0.004674396735167989

cpd04877

Magnesium chloride

0.0

cpd00541

Lipoate

2.3912003825920613E-7

cpd01022

Lactate

0.004376750700280112

cpd00009

Phosphate

7.888212756366915E-4

cpd00268

H2S2O3

0.005911912503694945

cpd00218

Niacin

4.018000642880103E-7

cpd00263

Pyridoxol

4.805843906189926E-7

cpd00443

ABEE

3.604382929642445E-7

cpd00149

Co2+

6.2567129315828435E-6

cpd00020

Pyruvate

0.004456327985739751

cpd00166

Calomide

6.208943362018653E-10

cpd10393

Triglycollamic acid

7.822277847309135E-5

cpd03387

Selenite

1.8556434803460422E-6

cpd00971

Na+

0.5454368516309787

cpd11145

Sodium molybdate

4.0461913201103796E-7

cpd00063

Ca2+

9.45065556358666E-4

cpd10515

Fe2+

2.8466035361466998E-5

cpd00644

PAN

1.899984800121599E-7

cpd00048

Sulfate

0.01370677160251986

cpd00001

H2O

1.0

cpd00305

THI

1.457615457720406E-7

cpd00099

Cl-

0.5425695250130088

cpd00104

BIOT

8.069071249899136E-8

cpd00205

K+

0.005949661629174815

cpd00254

Mg

0.038019216153736865

cpd00393

FOL

4.4664790745455356E-8

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