Tag Archive: PubMed

PubMed2XL 2.0 is now available. You can read the documentation and download the newest version here. There are a few notable changes to the graphical user interface (GUI) and lots of huge changes under the hood. As far as the GUI the…Read more

Update, 9 pm EST, May 27, 2012: Well, this is interesting. After reading this page, I see that by setting the "metadataPrefix" to "pmc_fm" I can bypass steps #3 and #4 altogether it seems – provided one's OAI harvester/indexer is…Read more

I've uploaded a new version of PubMed2XL, a Windows application that converts article lists from PubMed.gov into Microsoft Excel files. Unlike downloading the CSV directly from PubMed.gov, PubMed2XL gives users (OK … advanced users) the ability to customize the output…Read more

It looks like things are afoot at PubMed.gov. They've apparently added a CSV option for downloading citations. This is great and will facilitate people getting citations into spreadsheets. Having this new option sure beats that FLink thing. I'm not sure…Read more

I've updated the documentation for PubMed2XL, a Windows application that converts article lists from pubmed.gov into Microsoft Excel files. The documentation isn't incredibly thorough, but I think it's enough to work for now. Speaking of getting PubMed search results into…Read more

I've released the first Beta version of PubMed2XL, a Windows application that converts article lists from pubmed.gov into Microsoft Excel files. If you'd like to use the software you can download it. Yes, it's free. 😛 Here's a little video…Read more

Update, September 2010: This post refers to an Alpha version of PubMed2XL. You can get the latest version of the software here. … Some time ago – exactly a year ago, actually! – I shared a post on how to…Read more

Update, December 10, 2010: If you are interested in getting PubMed citations into a spreadsheet application (Excel, etc.) please see PubMed2XL. PubMed2XL is free software that can convert PubMed citations into a Microsoft Excel file. … As part of my…Read more