This R package is intended to implement a program for detecting differentially expressed genes (DEG) using RNA-Seq by combining significance of exons within a gene. CEDER first tests for differentially expressed exons yielding a p-value for each, and then gives a score indicating the potential for a gene to be differentially expressed by integrating the p-values of the exons in the gene.

Type:

Desktop

CEDER specifications

Unique identifier:

OMICS_01301

Interface:

Command line interface

Operating system:

Unix/Linux, Mac OS, Windows

Computer skills:

Advanced

Maintained:

Yes

Software type:

Package/Module

Restrictions to use:

None

Programming languages:

R

versioning

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