> How
> can I make it put the output in the directory the program was called -
> is there a flag I can add to the @params ??
Hi all,
Jason and myself were considering to convert the tempdir method in
Bio::Tools::Run::WrapperBase in a setter/getter, so that instead of
getting a random tempdir, one could set the tempdir to a defined value:
Something like:
sub tempdir{
my ($self) = @_;
## Add the setter part here
return $self->{'_tmpdir'} = shift if @_;
##
unless( $self->{'_tmpdir'} ) {
$self->{'_tmpdir'} = $self->io->tempdir(CLEANUP => !
$self->save_tempfiles );
}
unless( -d $self->{'_tmpdir'} ) {
mkdir($self->{'_tmpdir'},0777);
}
$self->{'_tmpdir'};
}
Jason: How do you want the CLEANUP part to behave if the tempdir is
setted? The same way as save_tempfiles?
Bests,
Albert.