Scooping up science and technology

“Normal brain waves would resemble jagged lines with no apparent pattern or order on an electroencephalogram (EEG),” said Andrew Szeri, UC Berkeley professor of mechanical engineering and applied science and technology, and principal investigator of the study. “But in the brains of epilepsy patients, the spreading of a seizure is made manifest by strong coherent waves of electrical activity in the cortex.”

To model this behavior, the researchers adapted stochastic partial differential equations to describe the architecture of the brain. This same class of equations is used to spot trends in the stock market, weather, or other complex systems that could be affected by random events.

They simulated the hyperexcitation of neurons in a portion of the brain and found that the stimulus produced traveling waves of electrical activity.

To test the accuracy of their model, the UC Berkeley researchers teamed up with Dr. Heidi Kirsch, assistant professor of neurology at UC San Francisco’s Epilepsy Center. Kirsch was treating a 49-year-old epilepsy patient whose seizures were not reliably controlled by medication. The patient was diagnosed with mesial temporal sclerosis, a condition in which the hippocampus, the part of the brain that organizes memories, is smaller than normal.

“We estimate that two-thirds of patients with epilepsy will respond to medication,” said Kirsch, who also co-authored the paper. “For a number of the remaining one-third of patients, surgical removal of the part of the brain where seizures begin may offer a cure. The goal in seizure surgery is to find one spot where the seizure comes from, and when taking it out, to not hurt the patient.”

Before surgery, neurologists needed to map the region where the patient’s seizure originated to ensure that they only remove what is necessary. To help neurologists observe the patient’s seizures, 64 electrodes were implanted into his brain for a week. The researchers were thus able to obtain data from six of the patient’s seizures to compare with the mathematical model they had created.

The researchers focused on two subdural electrodes spaced a centimeter apart on the surface of the patient’s brain. They noticed a consistent delay of 25 milliseconds in electrical peaks between the two electrodes, indicating a strong, coherent wave pattern characteristic of a seizure.

“The wave signals from both the model and the observational data were similar in shape, frequency and speed of propagation,” said Kramer. “That suggests that our model is pretty accurate.”

The researchers say this is an early step in creating a model that can provide far more detail about the inner workings of the brain than is possible with electrodes alone.

“Electrodes reveal the consequence of the abnormal brain activity, but they don’t get at the cause,” said Szeri. “If we understand why and how these strong coherent waves progress over the surface of the brain, then we have a hope of doing something to change the situation by disrupting the signal.”

Much like a computer model can reveal more about the structural integrity of a building or the causes of a developing hurricane than is practical or desirable through direct observation, a computer simulation of a brain during a seizure could potentially provide a fuller picture of how and why electrical signals misfire.

“This model could provide insight into the pathophysiology of the spread of a seizure,” said Kirsch. “Further down the line, this could also help us model the impact of medications and other interventions, to theoretically test how drugs with certain mechanisms will impact the brain.”

The researchers point to ongoing research to develop interventions to halt epileptic seizures. Examples of potential directed therapies include focal cooling, in which the part of the brain experiencing a seizure is literally chilled to dampen the seizure, and electrical stimulation of the affected area of the brain to counter the seizure as it’s forming.

“Our hope is to provide a model that can be used to evaluate potential seizure treatments so we can move beyond the need for lobectomies,” said Szeri.

The National Science Foundation and a Berkeley Fellowship from the University of California helped support this research.