The typical University of Wisconsin-Madison Assistant Professor salary is $93,692. Assistant Professor salaries at University of Wisconsin-Madison can range from $60,000 - $198,771. This estimate is based upon 10 University of Wisconsin-Madison Assistant Professor salary report(s) provided by employees or estimated based upon statistical methods. When factoring in bonuses and additional compensation, a Assistant Professor at University of Wisconsin-Madison can expect to make an average total pay of $93,692 . See all Assistant Professor salaries to learn how this stacks up in the market.