...ntification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp...ey considers both intra-read discordance and soft-clipped tails of long reads to identify structural varian...

...ses. The first phase corrects base calling errors in the reads. The second phase assembles contigs from the corrected reads. The third phase uses paired...howing practical advantages in running FSG on multiple threads. Moreover, we have studied th...

BBMap.sh
Mapping Nanopore reads
BBMap.sh has a length cap of 6kbp. Reads longer than this will be brok...GGGAAAAA
In this case, all reads starting with "AAAAACCCCCTTTT...ault, "filterbyname" discards reads with names in your name list,...