Vitis vinifera vs Triticum dicoccoides LastZ Results

Vitis vinifera (Vitis vinifera, 12X) and Triticum dicoccoides (Triticum dicoccoides, WEWSeq_v.1.0) were aligned using the LastZ alignment algorithm (LastZ)
in Ensembl Plants release . Vitis vinifera was used as the reference species. After running LastZ, the raw LastZ alignment blocks
are chained according to their location in both genomes. During the final netting process, the best
sub-chain is chosen in each region on the reference species.

Results

Number of alignment blocks: 1,513,583

Genome coverage (bp)

Coding exon coverage (bp)

Vitis vinifera

Uncovered: 445,058,157 out of 486,265,422Covered: 41,207,265 out of 486,265,422

Uncovered: 10,019,959 out of 32,794,161Matches: 14,686,726 out of 32,794,161Mismatches: 7,557,006 out of 32,794,161Insertions: 530,470 out of 32,794,161

Triticum dicoccoides

Uncovered: 9,448,585,245 out of 10,079,039,394Covered: 630,454,149 out of 10,079,039,394

Uncovered: 46,879,058 out of 100,651,268Matches: 34,727,345 out of 100,651,268Mismatches: 17,721,530 out of 100,651,268Insertions: 1,323,335 out of 100,651,268