Hi there,
I'm a biology student from the University of Copenhagen, I'm currently
doing some lab work for my masters thesis. As a part of this I work a lot
with PCR and primer-design. I order to make life easier I wrote a program
that realigns a DNA alignment according to a peptide alignment, thereby
improving the alignment in areas not too well conserved. I hope that my
program will be of use to others as well. I'v attached the main program
(ReAlign.exe) as well as a small program the fixed a mac->pc text
conversion problem.
Best regards
Rasmus 'Raz' Wernersson.
Email: RWer@novo.dk & RWernersso@stud.aki.ku.dk
I have attached an updated version of my program 'ReAlign':
Real110b.zip. This is a major improvement over the first released
verion. Several serious bugs have been fixed and the program now
automatically matces the DNA/peptide sequences by translation.
I am working on a C version for DOS/Linux/FreeBSD/IRIX .. maybe also
MacOS.
Best Regards
Rasmus 'Raz' Wernersson.