Zinc in the structure of The Structure Of the Bir Domain of Iap-Like Protein 2 (pdb 1xb1)

The binding sites of Zinc atom in the structure of The Structure Of the Bir Domain of Iap-Like Protein 2 (pdb code 1xb1). This binding sites where shown with 5.0 Angstroms radius around Zinc atom. The 1xb1 structure was solved by H.SHIN, M.RENATUS, B.P.ECKELMAN, V.A.NUNES, C.A.M.SAMPAIO, G.S.SALVESEN, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:

interactive model:

Zinc binding site 7 out of 23 in 1xb1

Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Zinc in the PDB 1xb1. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphereResidues shown as a stick model or VDW spheres: B: Tyr265, B: Glu266, C: His343,

conact list:

Atom

Atom

Distance (A)

Zn

CB B:Tyr265

4.80

Zn

CD2 B:Tyr265

4.75

Zn

OE1 B:Glu266

2.85

Zn

OE2 B:Glu266

2.01

Zn

CD B:Glu266

2.74

Zn

CG B:Glu266

4.16

Zn

O C:His343

4.80

Zn

NE2 C:His343

4.32

Zn

CB C:His343

3.52

Zn

ND1 C:His343

2.28

Zn

CD2 C:His343

4.34

Zn

C C:His343

4.93

Zn

CE1 C:His343

3.23

Zn

CG C:His343

3.22

Zn

CA C:His343

4.21

interactive model:

Zinc binding site 8 out of 23 in 1xb1

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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Zinc in the PDB 1xb1. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphereResidues shown as a stick model or VDW spheres: B: Glu333,

conact list:

Atom

Atom

Distance (A)

Zn

OE1 B:Glu333

2.49

Zn

OE2 B:Glu333

2.26

Zn

CD B:Glu333

2.69

Zn

CG B:Glu333

4.19

interactive model:

Zinc binding site 9 out of 23 in 1xb1

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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 9 of Zinc in the PDB 1xb1. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphereResidues shown as a stick model or VDW spheres: C: Glu333,

interactive model:

Zinc binding site 17 out of 23 in 1xb1

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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 17 of Zinc in the PDB 1xb1. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphereResidues shown as a stick model or VDW spheres: E: Glu333,

conact list:

Atom

Atom

Distance (A)

Zn

OE1 E:Glu333

2.14

Zn

CB E:Glu333

4.92

Zn

OE2 E:Glu333

2.88

Zn

CD E:Glu333

2.85

Zn

CG E:Glu333

4.31

interactive model:

Zinc binding site 18 out of 23 in 1xb1

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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 18 of Zinc in the PDB 1xb1. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphereResidues shown as a stick model or VDW spheres: E: Asn255, E: His302, E: Glu332,