Fusion

STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:query proteins and first shell of interactors

white nodes:second shell of interactors

Node Content

empty nodes:proteins of unknown 3D structure

filled nodes:some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Slin_3597

Peptidase M23 (221 aa)

Predicted Functional Partners:

Slin_1923

Hypothetical protein (218 aa)

0.615

Slin_3598

Transcriptional regulator (166 aa)

0.530

Slin_6521

Carboxyl-terminal protease (709 aa)

0.480

Slin_5713

Peptidase S41; Degrades oligopeptides (1097 aa)

0.480

Slin_4394

Carboxyl-terminal protease (575 aa)

0.480

Slin_3923

Carboxyl-terminal protease (557 aa)

0.480

Slin_2089

Peptidase S41 (341 aa)

0.480

Slin_0786

Hypothetical protein (293 aa)

0.466

Slin_1924

ABC transporter (441 aa)

0.458

atpH

ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (179 aa)