Quick Questions for Peter and Rosemary Grant – “There is widespread misunderstanding about evolution; that it occurs extremely slowly and therefore cannot be studied in a person’s lifetime. This was the view of Charles Darwin. Many biologists and others now know that this is not correct…. The idea that animals as large as birds might evolve before our eyes is not so well known, yet our study in the entirely natural world of Daphne Major island has revealed this does in fact happen when there is a change in the environment, and it takes place over a period as short as a year, and repeatedly.” – h/t billare!

Is DNA Multilingual? – “The genetic code has traditionally been viewed as a universal set of instructions, exquisitely tuned to maintain robust stability and allow evolution-sustaining mutations. But the pervasive occurrence of recoded stop codons, and the backchannel crosstalk between microbes and viruses, paints a more intricate picture of multilingual genetic instructions.”

Jelly genome mystery – “The uniqueness of this ctenophore’s nervous system leads Moroz and his team to argue that it must have evolved independently, after the ctenophore lineage branched off from other animals some 500 million years ago.”

Genomic divergence in a ring species complex – “Ring species provide particularly clear demonstrations of how one species can gradually evolve into two, but are rare in nature…. Here we use genome-wide analyses to show that, although spatial patterns of genetic variation are currently mostly as expected of a ring species, historical breaks in gene flow have existed at more than one location around the ring, and the two Siberian forms have occasionally interbred.” – h/t razib!

Natural selection and infectious disease in human populations – “The ancient biological ‘arms race’ between microbial pathogens and humans has shaped genetic variation in modern populations, and this has important implications for the growing field of medical genomics. As humans migrated throughout the world, populations encountered distinct pathogens, and natural selection increased the prevalence of alleles that are advantageous in the new ecosystems in both host and pathogens. This ancient history now influences human infectious disease susceptibility and microbiome homeostasis, and contributes to common diseases that show geographical disparities, such as autoimmune and metabolic disorders.”

High genetic differentiation between populations often driven by classic selective sweeps – “‘We demonstrate that while sites of low differentiation represent sampling effects rather than balancing selection, sites showing extremely high population differentiation are enriched for positive selection events and that one half may be the result of classic selective sweeps. Among these, we rediscover known examples, where we actually identify the established functional SNP, and discover novel examples including the genes ABCA12, CALD1 and ZNF804, which we speculate may be linked to adaptations in skin, calcium metabolism and defense, respectively. Conclusions: We have identified known and many novel candidate regions for geographically restricted positive selection, and suggest several directions for further research.'” – @dienekes’.

this one’s for linton!: Why Marrying Your Cousin May Pay Off – “In line with previous findings, the researchers found that among non-foraging societies, a couple’s relatedness was linked with having more surviving children. But among foraging societies, the opposite was true: More-closely related spouses had fewer surviving children. Furthermore, the more family intermarriage in a society, the greater the benefit of intermarrying on the number of children couples had. In other words, in societies in which people frequently married their relatives, intermarrying showed a stronger link to having more children.”

The Closest of Strangers – “[I]dentical twins who are aunts and uncles invest more in caring for the children of their twins (their ‘genetic’ sons and daughters) than do fraternal twins.”

Irish fair skin can be traced to India and the Middle East – “A major new US study at Penn State University has found that Europeans’ light skin stems from a gene mutation from a single person who lived 10,000 years ago…. Keith Cheng from Penn State College of Medicine reported that one amino acid difference in the gene SLC24A5 is a key contributor to the skin color difference between Europeans and West Africans…. ‘The mutation in SLC24A5 changes just one building block in the protein, and contributes about a third of the visually striking differences in skin tone between peoples of African and European ancestry, he said…. The mutation, called A111T, is found in virtually everyone of European ancestry. A111T is also found in populations in the Middle East and Indian subcontinent, but not in high numbers in Africans. All individuals from the Middle East, North Africa, East Africa and South India who carry the A111T mutation share traces of the ancestral genetic code. According to the researchers, this indicates that all existing instances of this mutation originate from the same person.” – h/t 23andMe!

The puzzle of European hair, eye, and skin color – “The physical appearance of Europeans seems to result from a selection pressure that acted primarily on women and only secondarily on men. This is especially true for highly visible traits on or near the face—the focus of visual attention.” – from peter frost.

Heritability of brain volume change and its relation to intelligence – “Human brain volumes change throughout life, are highly heritable, and have been associated with general cognitive functioning…. Results show that changes in volumes of total brain (mean=-6.4ml; -0.5% loss), cerebellum (1.4ml, 1.0% increase), cerebral white matter (4.4ml, 0.9% increase), lateral ventricles (0.6ml; 4.8% increase) and in surface area (-19.7cm2, -1.1% contraction) are heritable (h2=43%; 52%; 29%; 31%; and 33%, respectively). An association between IQ (available for 91 participants) and brain volume change was observed, which was attributed to genes involved in both the variation in change in brain volume and in intelligence. Thus, dynamic changes in brain structure are heritable and may have cognitive significance in adulthood.”

Cognitive abilities amongst the Sámi population – “Lapps have an IQ around 100.8 are tilted towards visuospatial ability and away from verbal ability.” – from elijah armstrong, michael woodley the younger, and richard lynn. edit: original paper here on elijah’s blog! (^_^)

Does brain structure determine your political views? – “‘People like to believe that their own political beliefs are rational, that they’re a sensible response to the world around them, so when we come along and say, “Maybe there are these predispositions, influential but perhaps not fully in your conscious awareness,” that’s not the way we like to view our own political beliefs.'” – h/t mr. robert ford!

Sex-Related Neuroanatomical Basis of Emotion Regulation Ability – “Behavioral research has demonstrated that males have a higher capability of regulating their own and others’ emotions than females; however, little is known about the sex-specific brain mechanisms involved in emotion regulation ability…. we found the sex differences in the neuroanatomical basis of emotion regulation ability. Males showed a stronger positive relation between emotion regulation ability and regional gray matter volume (rGMV) in the right dorsolateral prefrontal cortex. In contrast, females demonstrated a stronger positive relation between emotion regulation ability and rGMV in an anatomical cluster that extends from the left brainstem to the left hippocampus, the left amygdala and the insular cortex.”

Privilege and Morality – “Our species isn’t good at nuance. The ‘privilege’ debate will and must take place in a morally charged context. It is not possible to sanitize the discussion by scrubbing it free of moral emotions. That is one of the many reasons why it is so important to understand what morality is and why it exists. It does not exist as a transcendental entity that happened to pop into existence with the big bang, nor does it exist because the Big Man upstairs wants it that way. It exists because it evolved.” – from helian.

Economic Growth & Human Biodiversity – “Economic growth in lower-IQ countries does not invalidate either the reality of IQ differences between countries or the persistence of those disparities.” – from pseudoerasmus.

Good Fences: The Importance of Setting Boundaries for Peaceful Coexistence – “Switzerland is recognized as a country of peace, stability and prosperity. This is surprising because of its linguistic and religious diversity that in other parts of the world lead to conflict and violence. Here we analyze how peaceful stability is maintained. Our analysis shows that peace does not depend on integrated coexistence, but rather on well defined topographical and political boundaries separating groups, allowing for partial autonomy within a single country. In Switzerland, mountains and lakes are an important part of the boundaries between sharply defined linguistic areas. Political canton and circle (sub-canton) boundaries often separate religious groups. Where such boundaries do not appear to be sufficient, we find that specific aspects of the population distribution guarantee either sufficient separation or sufficient mixing to inhibit intergroup violence according to the quantitative theory of conflict. In exactly one region, a porous mountain range does not adequately separate linguistic groups and that region has experienced significant violent conflict, leading to the recent creation of the canton of Jura.”

How a Protestant spin machine hid the truth about the English Reformation – “It seems that in 1533, the year of Henry’s break from Rome, traditional Catholicism was the religion of the vast majority of the country. And in most places it was absolutely thriving. It had developed a particularly English flavour, with a focus on the involvement of ordinary people in parish churches, village greens, plays, and pageants – much of which seemed to involve a good deal of community parties, dancing, and drinking. It is true that English religion in the early 1500s was not especially studious or erudite. The people did not spend hours a day in biblical studies, contemplation, and moralising in the manner of the more intense European reformers. But England had a nationally cohesive spirituality that was alive and exuberant, with a distinctly community feel…. The conclusion of this modern grassroots scholarship is that bulldozing the Catholic Church off the face of medieval England was not a ‘bottom up’ revolution in which Henry merely acquiesced to his people’s wishes by throwing off a widely hated foreign domination. To the contrary, it looks increasingly like Henry and his circle imposed the Reformation ‘top down’, unleashing 100 years of deep anger and alienation that was only overcome by sustained politicking and ruthless force.” – h/t william briggs!

50,000 generations of bacteria prove that evolution never stops – “[C]omputer models have shown that animals can still experience significant evolutionary changes over time, even in the absence of selectional pressures. Traits like evolvability, or evolutionary potential. Indeed, the Lenski study shows that the same holds true when working with organisms in evolutionary ‘real time.’ The researchers, who performed a comparative analyses of the bacteria after every 500 generations, showed that E. coli will continue to evolve towards increasing replicative efficiency.” – h/t peter turchin! – see also Krazy Kats from greg cochran.

Out of Africa revisited (entrevista a Chris Stringer) – “To what extent do these differences in evolutionary paths, if any, affect the human biodiversity we see today? That is still unclear, but will become clearer in the next few weeks with the publication of new data….”

Neanderthal virus DNA spotted hiding in modern humans – “The DNA of ancient viruses first spotted in the Neanderthal genome have now been identified in modern humans…. [The researchers] examined the genomes of 67 people with cancer, and found they each contained seven of the sequences supposedly unique to the ancient humans.”

How Our Minds Went Viral – “Based on this research, the scientists propose a scenario. Our ancestors millions of years ago were infected with a virus. Eventually it became lodged in our genome. At some point, a mutation moved the virus enhancer next to the PRODH gene. Further mutations allowed it to helped boost the gene’s activity in certain areas of the brain, such as the hippocampus…. Perhaps our minds are partly the way they are today thanks to an infection our ancestors got a few millions of years ago.” – h/t john durant!

Reconstructing the Population Genetic History of the Caribbean – “‘We find evidence of two pulses of African migration. The first pulse—which today is reflected by shorter, older ancestry tracts—consists of a genetic component more similar to coastal West African regions involved in early stages of the trans-Atlantic slave trade. The second pulse—reflected by longer, younger tracts—is more similar to present-day West-Central African populations, supporting historical records of later transatlantic deportation. Surprisingly, we also identify a Latino-specific European component that has significantly diverged from its parental Iberian source populations, presumably as a result of small European founder population size. We demonstrate that the ancestral components in admixed genomes can be traced back to distinct sub-continental source populations with far greater resolution than previously thought, even when limited pre-Columbian Caribbean haplotypes have survived.'” – @dienekes’.

The Paradox of Diverse Communities – “Their simulations of more than 20 million virtual ‘neighborhoods’ demonstrate a troubling paradox: that community and diversity may be fundamentally incompatible goals…. After 20 million-plus simulations, the authors found that the same basic answer kept coming back: The more diverse or integrated a neighborhood is, the less socially cohesive it becomes, while the more homogenous or segregated it is, the more socially cohesive…. [T]he models demonstrated that it was impossible to simultaneously foster diversity and cohesion ‘in all reasonably likely worlds.’ In fact, the trends are so strong that no effective social policy could combat them, according to Neal. As he put it in a statement, ‘In essence, when it comes to neighborhood desegregation and social cohesion, you can’t have your cake and eat it too.'” – see also original research article: The (In)compatibility of Diversity and Sense of Community [pdf]. – h/t nearly everybody on twitter!

War’s Enduring Effects on the Development of Egalitarian Motivations and In-Group Biases – “[G]reater exposure to war created a lasting increase in people’s egalitarian motivations toward their in-group, but not their out-groups, during a developmental window starting in middle childhood (around 7 years of age) and ending in early adulthood (around 20 years of age). Outside this window, war had no measurable impact on social motivations in young children and had only muted effects on the motivations of older adults.” – h/t t.greer!

Rural White Liberals – a Key to Understanding the Political Divide – “there are likely several factors involved in shaping the modern American political landscape. Of which, the strongest may be ethnonational origin. This is buttressed by population density pressure, founder effects, internal self-sorting, and perhaps even recent evolution.” – from jayman.

The White man has no friends – “Over the past millennium, Western Europeans have created a social environment where the individual is largely free from collective ties of kinship and ethnicity. Because the State has imposed a monopoly on the use of violence, there is less need to rely on kinsmen to safeguard one’s life and property.” (and ’cause of The Outbreeding Project, too, imho. (^_^) ) – from peter frost.

World survey links religion and happiness — for some – “[I]n societies under stress, those who are religious outnumber – and are happier than – their nonreligious counterparts. Where peace and plenty are the norm, however, religious participation is lower and people are happier whether or not they are religious….”