MuSeqBox

Other Resources

MuSeqBox

a program for
Multi-query
Sequence
Blast
output
examination

MuSeqBox examines BLAST output, extracts the
informative parameters of BLAST hits, and saves them in
tabular form. The program can further analyze hit tables
to produce
subsets of BLAST hits according to user-specified criteria.
In particular, BLASTX output may be further analyzed to
indicate queries that might potentially be alternatively
spliced transcripts (e.g., an extra large segment of
insertion or deletion), full-length coding sequences, or
contain repeat structures.