I’m writing up our code, and I was wondering if we are allowed to shoot balls at the other alliances flags ex: we are red, near the end of auto we back up to the line, aim towards their flag (toggled for blue), shoot, hit, and toggle it for red.
I’m planning to have the scouts take note of opposing team’s autonomous, and we can deploy this special code when we know they will hit the top flag on their side.

Seems OK by my reading of <SG3>. You might want to check the Q&A, though, as the GDC might see <SG3>'s interactions with <SG7> differently than how I read it. Toggling flags with cross-court shots seems to be within the limits of expected interaction between robots in autonomous, as the flags on the middle pole are unquestionably spots where robots might have conflicting interactions in autonomous, so flags appear to be fair game. <SG3> by my reading appears to be largely aimed at reducing the viability of “our autonomous isn’t as good as yours, so we’re just going to ram you in autonomous” strategies.