Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

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This report is separated into 2 chapters. The chapters are (1) Progress toward determining the spawning distribution of supplemented fallchinook salmon in the Snake River in 1999; and (2) Fallchinook salmon spawning ground surveys in the Snake River, 1999.

The Bonneville Power Administration (BPA) Project 2003-038-00, Evaluate the restoration potential of Snake RiverfallChinook salmon spawning habitat, began in FY04 (15 December 2003) and continues into FY06. This status report is intended to summarize accomplishments during FY04 and FY05. Accomplishments are summarized by Work Elements, as detailed in the Statement of Work (see BPA's project management database PISCES). This project evaluates the restoration potential of mainstem habitats for fallChinook salmon. The studies address two research questions: 'Are there sections not currently used by spawning fallChinook salmon within the impounded lower Snake River that possess the physical characteristics for potentially suitable fallChinook spawning habitat?' and 'Can hydrosystem operations affecting these sections be adjusted such that the sections closely resemble the physical characteristics of current fallChinook salmon spawning areas in similar physical settings?' Efforts are focused at two study sites: (1) the Ice Harbor Dam tailrace downstream to the Columbia River confluence, and (2) the Lower Granite Dam tailrace. Our previous studies indicated that these two areas have the highest potential for restoring Snake RiverfallChinook salmon spawning habitat. The study sites will be evaluated under existing structural configurations at the dams (i.e., without partial removal of a dam structure), and alternative operational scenarios (e.g., varying forebay/tailwater elevations). The areas studied represent tailwater habitat (i.e., riverine segments extending from a dam downstream to the backwater influence from the next dam downstream). We are using a reference site, indicative of current fallChinook salmon spawning areas in tailwater habitat, against which to compare the physical characteristics of each study site. The reference site for tailwater habitats is the section extending downstream from the Wanapum Dam tailrace on the Columbia River. Escapement estimates for fall of 2000 indicate more than 9000 adult fallChinook salmon returned to this area, accounting for more than 2100 redds within a 5 km section of river.

This study was initiated to provide empirical data and analyses on the dam passage timing, travel rate, survival, and life history variation of fallChinook salmon that are produced in the Clearwater River. The area of interest for this study focuses on the lower four miles of the Clearwater River and its confluence with the Snake River because this is an area where many fish delay their seaward migration. The goal of the project is to increase our understanding of the environmental and biological factors that affect juvenile life history of fallChinook salmon in the Clearwater River. The following summaries are provided for each of the individual chapters in this report.

This document is the 1992 annual progress report for selected studies of fallchinook Salmon Oncorhynchus tshawytscha conducted by the National Biological Survey (NBS) and the US Fish and Wildlife Service. The decline in abundance of fallchinook salmon in the Snake River basin has become a growing concern. Effective recovery efforts for fallchinook salmon cannot be developed until we increase our knowledge of the factors that are limiting the various life history stages. This study attempts to identify those physical and biological factors which influence spawning of fallchinook salmon in the free-flowing Snake River and their rearing and seaward migration through Columbia River basin reservoirs.

This report summarizes results of research activities conducted primarily in 1997 and 1998. This report communicates significant findings that will aid in the management and recovery of fallchinook salmon in the Columbia River Basin.

This report summarizes results of research activities conducted in 1999 and years previous. In an effort to provide this information to a wider audience, the individual chapters in this report have been submitted as manuscripts to peer-reviewed journals. These chapters communicate significant findings that will aid in the management and recovery of fallchinook salmon in the Columbia River Basin. Abundance and timing of seaward migration of Snake Riverfallchinook salmon was indexed using passage data collected at Lower Granite Dam for five years. We used genetic analyses to determine the lineage of fish recaptured at Lower Granite Dam that had been previously PIT tagged. We then used discriminant analysis to determine run membership of PIT-tagged smolts that were not recaptured to enable us to calculate annual run composition and to compared early life history attributes of wild subyearling fall and spring chinook salmon. Because spring chinook salmon made up from 15.1 to 44.4% of the tagged subyearling smolts that were detected passing Lower Granite Dam, subyearling passage data at Lower Granite Dam can only be used to index fallchinook salmon smolt abundance and passage timing if genetic samples are taken to identify run membership of smolts. Otherwise, fallchinook salmon smolt abundance would be overestimated and timing of fallchinook salmon smolt passage would appear to be earlier and more protracted than is the case.

This report documents a four-year study to assess hydraulic conditions in the lower Snake River. The work was conducted for the Bonneville Power Administration, U.S. Department of Energy, by the Pacific Northwest National Laboratory. Cold water released from the Dworshak Reservoir hypolimnion during mid- to late-summer months cools the Clearwater River far below equilibrium temperature. The volume of released cold water augments the Clearwater River, and the combined total discharge is on the order of the Snake River discharge when the two rivers meet at their confluence near the upstream edge of Lower Granite Reservoir. With typical temperature differences between the Clearwater and Snake rivers of 10°C or more during July and August, the density difference between the two rivers during summer flow augmentation periods is sufficient to stratify Lower Granite Reservoir as well as the other three reservoirs downstream. Because cooling of the river is desirable for migrating juvenile fallChinook salmon (Oncorhynchus tshawytscha) during this same time period, the amount of mixing and cold water entrained into Lower Granite Reservoir’s epilimnion at the Clearwater/Snake River confluence is of key biological importance to juvenile fallChinook salmon. Data collected during this project indicates the three reservoirs downstream of Lower Granite also stratify as direct result of flow augmentation from Dworshak Reservoir. These four lower Snake reservoirs are also heavily influenced by wind forcing at the water’s surface, and during periods of low river discharge, often behave like a two-layer lake. During these periods of stratification, lower river discharge, and wind forcing, the water in the upper layer of the reservoir is held in place or moves slightly upstream. This upper layer is also exposed to surface heating and may warm up to temperatures close to equilibrium temperature. The depth of this upper warm layer and its direction of travel may also be of key biological importance to juvenile fallChinook salmon. This report describes field data collection, modeling, and analysis of hydrodynamic and temperature conditions in the Lower Granite Reservoir during the summer flow augmentation periods of 2002, 2003, and 2004 plus a brief one-week period in 2005 of Lower Monumental, Little Goose, and Lower Granite Reservoirs. Circulation patterns in all four lower Snake River reservoirs were numerically simulated for periods of 2002, 2003, 2004, and 2005 using CE-QUAL-W2. Simulation results show that these models are sufficiently capable of matching diurnal and long term temperature and velocity changes in the reservoirs. In addition, the confluence zone of the Clearwater and Snake rivers was modeled using the 3-D model Flow3-D. This model was used to better understand mixing processing and entrainment. Once calibrated and validated, the reservoir models were used to investigate downstream impacts of alternative reservoir operation schemes, such as increasing or decreasing the ratio of Clearwater to Snake discharge. Simulation results were also linked with the particle tracking model FINS to better understand alterations of integrated metrics due to alternative operation schemes. These findings indicate that significant alterations in water temperature throughout the lower Snake River are possible by altering hypolimnetic discharges from Dworshak Reservoir and may have a significant impact on the behavior of migrating juvenile fallChinook salmon during periods of flow augmentation.

We evaluated substrate quality at two historic fallChinook salmon (Oncorhynchus tshawytscha) spawning sites in the Snake River, Idaho, USA. The primary objective of this evaluation was to measure sediment permeability within these areas to determine the potential quality of the habitat in the event that anadromous salmonids are reintroduced to the upper Snake River. Riverbed sediments within the two sites in the upper Snake River were sampled using freeze cores and hydraulic slug tests. Sediment grain size distributions at both sites were typical of gravel-bed rivers with the surface layer coarser than the underlying substrate, suggesting the riverbed surface was armored. Despite the armored nature of the bed, the size of the largest material present on the riverbed surface was well within the size limit of material capable of being excavated by spawning fallChinook salmon. The percentage of fines was low, suggesting good quality substrate for incubating salmon embryos. Geometric mean particle sizes found in this study compared to a 55% to 80% survival to emergence based on literature values. Hydraulic slug tests showed moderate to high hydraulic conductivity and were comparable to values from current fallChinook salmon spawning areas in the Hells Canyon Reach of the Snake River and the Hanford Reach of the Columbia River. Predicted estimates of mean egg survival at both sites (48% and 74%) equaled or exceeded estimates from fallChinook salmon spawning areas in the Hells Canyon Reach and the Hanford Reach.

This document is the 1991 annual progress report for selected studies of fallchinook salmon Oncorhynchus tshawytscha conducted by the US Fish and Wildlife Service. The decline in abundance of fallchinook salmon in the Snake River basin has become a growing concern. In April 1992, Snake Riverfallchinook salmon were listed as ``threatened`` under the Endangered Species Act. Effective recovery efforts for fallchinook salmon can not be developed until we increase our knowledge of the factors that are limiting the various life history stages. This study attempts to identify those physical and biological factors which influence spawning of fallchinook salmon in the free-flowing Snake River and their rearing and seaward migration through Columbia River basin reservoirs.

This report summarizes results of research activities conducted from 1995 through 1998 on identifying the spawning habitat requirements of fallchinook salmon (Oncorhynchus tshawytscha) in the Hanford Reach of the Columbia River. The project investigated whether traditional spawning habitat models could be improved in order to make better predictions of available habitat for fallchinook salmon in the Snake River. Results suggest models could be improved if they used spawning area-specific, rather than river-specific, spawning characteristics; incorporated hyporheic discharge measurements; and gave further consideration to the geomorphic features that are present in the unconstrained segments of large alluvial rivers. Ultimately the recovery of endangered fallchinook salmon will depend on how well we are able to recreate the characteristics once common in alluvial floodplains of large rivers. The results from this research can be used to better define the relationship between these physical habitat characteristics and fallchinook salmon spawning site selection, and provide more efficient use of limited recovery resources. This report is divided into four chapters which were presented in the author's doctoral dissertation which he completed through the Department of Fisheries and Wildlife at Oregon State University. Each of the chapters has been published in peer reviewed journals or is currently under review. Chapter one is a conceptual spawning habitat model that describes how geomorphic features of river channels create hydraulic processes, including hyporheic flows, that influence where salmon spawn in unconstrained reaches of large mainstem alluvial rivers. Chapter two describes the comparison of the physical factors associated with fallchinook salmon redd clusters located at two sites within the Reach. Spatial point pattern analysis of redds showed that redd clusters averaged approximately 10 hectares in area and their locations were consistent from year to year. The tendency to spawn in clusters suggests fallchinook salmon's use of spawning habitat is highly selective. Hydraulic characteristics of the redd clusters were significantly different than the habitat surrounding them. Velocity and lateral slope of the river bottom were the most important habitat variables in predicting redd site selection. While these variables explained a large proportion of the variance in redd site selection (86 to 96%), some unmeasured factors still accounted for a small percentage of actual spawning site selection. Chapter three describes the results from an investigation into the hyporheic characteristics of the two spawning areas studied in chapter two. This investigation showed that the magnitude and chemical characteristics of hyporheic discharge were different between and within two spawning areas. Apparently, fallchinook salmon used chemical and physical cues from the discharge to locate spawning areas. Finally, chapter four describes a unique method that was developed to install piezometers into the cobble bed of the Columbia River.

Recovery efforts for the endangered fallchinook salmon necessitates knowledge of the factors limiting the various life history stages. This study attempts to identify those physical and biological factors which affect spawning of the fish in the free-flowing Snake River and their rearing seward migration through Columbia River basin reservoirs. The spawning was generally a November event in 1993, with some activity in late Oct. and early Dec. Spawning habitat availability was assessed by applying hydraulic and habitat models to known fallchinook salmon spawning sites. Juveniles were seined and PIT tagged in the free-flowing Snake River, and in the Columbia River in he Hanford Reach and in McNary Reservoir. Subyearling fish were marked at McNary Dam to relate river flow and migration patterns of juveniles to adult returns. Hydroacoustic surveys were conducted on McNary and John Day reservoirs and in net pens.

The Hanford Reach of the Columbia River provides the only major spawning habitat for the upriver bright (URB) race of fallchinook salmon in the mainstem Columbia River. Hanford Site biologists have conducted aerial surveys of spawning salmon in the Hanford Reach since 1948. This report summarizes data on fallchinook salmon spawning in the Hanford Reach and presents a discussion of factors that may affect population trends. Most data are limited to fisheries agency reports and other working documents. Fisheries management practices in the Columbia River system have changed rapidly over the last decade, particularly under requirements of the Pacific Northwest Power Planning and Conservation Act of 1980. New information has been generated and included in this report. 75 refs., 17 figs., 11 tabs.

This report describes research conducted by the Pacific Northwest National Laboratory for the Bonneville Power Administration (BPA) as part of the Fish and Wildlife Program directed by the Northwest Power and Conservation Council. The study evaluated the restoration potential of Snake RiverfallChinook salmon spawning habitat within the impounded lower Snake River. The objective of the research was to determine if hydroelectric dam operations could be modified, within existing system constraints (e.g., minimum to normal pool levels; without partial removal of a dam structure), to increase the amount of available fallChinook salmon spawning habitat in the lower Snake River. Empirical and modeled physical habitat data were used to compare potential fallChinook salmon spawning habitat in the Snake River, under current and modified dam operations, with the analogous physical characteristics of an existing fallChinook salmon spawning area in the Columbia River. The two Snake River study areas included the Ice Harbor Dam tailrace downstream to the Highway 12 bridge and the Lower Granite Dam tailrace downstream approximately 12 river kilometers. These areas represent tailwater habitat (i.e., riverine segments extending from a dam downstream to the backwater influence from the next dam downstream). We used a reference site, indicative of current fallChinook salmon spawning areas in tailwater habitat, against which to compare the physical characteristics of each study site. The reference site for tailwater habitats was the section extending downstream from the Wanapum Dam tailrace on the Columbia River. FallChinook salmon spawning habitat use data, including water depth, velocity, substrate size and channelbed slope, from the Wanapum reference area were used to define spawning habitat suitability based on these variables. FallChinook salmon spawning habitat suitability of the Snake River study areas was estimated by applying the Wanapum reference reach habitat suitability criteria to measured and modeled habitat data from the Snake River study areas. Channel morphology data from the Wanapum reference reach and the Snake River study areas were evaluated to identify geomorphically suitable fallChinook salmon spawning habitat. The results of this study indicate that a majority of the Ice Harbor and Lower Granite study areas contain suitable fallChinook salmon spawning habitat under existing hydrosystem operations. However, a large majority of the currently available fallChinook salmon spawning habitat in the Ice Harbor and Lower Granite study areas is of low quality. The potential for increasing, through modifications to hydrosystem operations (i.e., minimum pool elevation of the next downstream dam), the quantity or quality of fallChinook salmon spawning habitat appears to be limited. Estimates of the amount of potential fallChinook salmon spawning habitat in the Ice Harbor study area decreased as the McNary Dam forebay elevation was lowered from normal to minimum pool elevation. Estimates of the amount of potential fallChinook salmon spawning habitat in the Lower Granite study area increased as the Little Goose Dam forebay elevation was lowered from normal to minimum pool elevation; however, 97% of the available habitat was categorized within the range of lowest quality. In both the Ice Harbor and Lower Granite study areas, water velocity appears to be more of a limiting factor than water depth for fallChinook salmon spawning habitat, with both study areas dominated by low-magnitude water velocity. The geomorphic suitability of both study areas appears to be compromised for fallChinook salmon spawning habitat, with the Ice Harbor study area lacking significant bedforms along the longitudinal thalweg profile and the Lower Granite study area lacking cross-sectional topographic diversity. To increase the quantity of available fallChinook salmon spawning habitat in the Ice Harbor and Lower Granite study area, modifications to hydroelectric dam operations beyond those evaluated in this study likely would be necessary. M

The development of the Snake River hydroelectric system has affected fallchinook salmon smolts by shifting their migration timing to a period when downstream reservoir conditions are unfavorable for survival. Subsequent to the Snake Riverchinook salmon fall-run Evolutionary Significant Unit being listed as Threatened under the Endangered Species Act, recovery planning has included changes in hydrosystem operations to improve water temperature and flow conditions during the juvenile chinook salmon summer migration period. In light of the limited water supplies from the Dworshak reservoir for summer flow augmentation, and the associated uncertainties regarding benefits to migrating fallchinook salmon smolts, additional approaches for improved smolt survival need to be evaluated. This report describes research conducted by PNNL that evaluated relationships among river discharge, hyporheic zone characteristics, and egg pocket water temperature in Snake Riverfallchinook salmon spawning areas. The potential for improved survival would be gained by increasing the rate at which early life history events proceed (i.e., incubation and emergence), thereby allowing smolts to migrate through downstream reservoirs during early- to mid-summer when river conditions are more favorable for survival. PNNL implemented this research project throughout 160 km of the Hells Canyon Reach (HCR) of the Snake River. The hydrologic regime during the 2002?2003 sampling period exhibited one of the lowest, most stable daily discharge patterns of any of the previous 12 water years. The vertical hydraulic gradients (VHG) between the river and the riverbed suggested the potential for predominantly small magnitude vertical exchange. The VHG also showed little relationship to changes in river discharge at most sites. Despite the relatively small vertical hydraulic gradients at most sites, the results from the numerical modeling of riverbed pore water velocity and hyporheic zone temperatures suggested that there was significant vertical hydrologic exchange during all time periods. The combined results of temperature monitoring and numerical modeling indicate that only two sites were significantly affected by short-term (hourly to daily) large magnitude changes in discharge. Although the two sites exhibited acute flux reversals between river water and hyporheic water resulting from short-term large magnitude changes in discharge, these flux reversals had minimal effect on emergence timing estimates. Indeed, the emergence timing estimates at all sites was largely unaffected by the changes in river stage resulting from hydropower operations at Hells Canyon Dam. Our results indicate that the range of emergence timing estimates due to differences among the eggs from different females can be as large as or larger than the emergence timing estimates due to site differences (i.e., bed temperatures within and among sites). We conclude that during the 2002-2003 fallchinook salmon incubation period, hydropower operations of Hells Canyon Dam had an insignificant effect on fry emergence timing at the study sites. It appears that short-term (i.e., hourly to daily) manipulations of discharge from the Hells Canyon Complex during the incubation period would not substantially alter egg pocket incubation temperatures, and thus would not affect fry emergence timing at the study sites. However, the use of hydropower operational manipulations at the Hells Canyon Complex to accelerate egg incubation and fry emergence should not be ruled out on the basis of only one water year's worth of study. Further investigation of the incubation environment of Snake Riverfallchinook salmon is warranted based on the complexity of hyporheic zone characteristics and the variability of surface/subsurface interactions among dry, normal, and wet water years.

Spawning ground surveys were conducted in 1994 as part of a five year study of Snake Riverchinook salmon Oncorhynchus tshawyacha begun in 1991. Observations of fallchinook salmon spawning in the Snake River were limited to infrequent aerial red counts in the years prior to 1987. From 1987-1990, red counts were made on a limited basis by an interagency team and reported by the Washington Department of Fisheries. Starting in 1991, the U.S. Fish and Wildlife Service (USFWS), and other cooperating agencies and organizations, expanded the scope of spawning ground surveys to include: (1) additional aerial surveys to improve red counts and provide data on the timing of spawning; (2) the validation (ground truthing) of red counts from aerial surveys to improve count accuracy; (3) underwater searches to locate reds in water too deep to allow detection from the air; and (4) bathymetric mapping of spawning sites for characterizing spawning habitat. This document is the 1994 annual progress report for selected studies of fallchinook salmon. The studies were undertaken because of the growing concern about the declining salmon population in the Snake River basin.

This report describes a study conducted by Pacific Northwest National Laboratory for the Bonneville Power Administration's Columbia Basin Fish and Wildlife Program during the fall of 2001. The objective was to study the migration and energy use of adult fallchinook salmon (Oncorhynchus tshawytscha) traveling up the Klickitat River to spawn. The salmon were tagged with either surgically implanted electromyogram (EMG) transmitters or gastrically implanted coded transmitters and were monitored with mobile and stationary receivers. Swim speed and aerobic and anaerobic energy use were determined for the fish as they attempted passage of three waterfalls on the lower Klickitat River and as they traversed free-flowing stretches between, below, and above the falls. Of the 35 EMG-tagged fish released near the mouth of the Klickitat River, 40% passed the first falls, 24% passed the second falls, and 20% made it to Lyle Falls. None of the EMG-tagged fish were able to pass Lyle Falls, either over the falls or via a fishway at Lyle Falls. Mean swimming speeds ranged from as low as 52.6 centimeters per second (cm s{sup -1}) between falls to as high as 189 (cm s{sup -1}) at falls passage. Fish swam above critical swimming speeds while passing the falls more often than while swimming between the falls (58.9% versus 1.7% of the transmitter signals). However, fish expended more energy swimming the stretches between the falls than during actual falls passage (100.7 to 128.2 kilocalories [kcals] to traverse areas between or below falls versus 0.3 to 1.0 kcals to pass falls). Relationships between sex, length, and time of day on the success of falls passage were also examined. Average swimming speeds were highest during the day in all areas except at some waterfalls. There was no apparent relationship between either fish condition or length and successful passage of waterfalls in the lower Klickitat River. Female fallchinook salmon, however, had a much lower likelihood of passing waterfalls than males. The study also examined energy costs and swimming speeds for fish released above Lyle Falls as they migrated to upstream spawning areas. This journey averaged 15.93 days to travel a mean maximum of 37.6 km upstream at a total energy cost of approx 3,971 kcals (34% anaerobic and 66% aerobic) for a sample of five fish. A bioenergetics example was run, which estimated that fallchinook salmon would expend an estimated 1,208 kcal to pass from the mouth of the Columbia River to Bonneville Dam and 874 kcals to pass Bonneville Dam and pool and the three falls on the Lower Klickitat River, plus an additional 2,770 kcals above the falls to reach the spawning grounds, leaving them with approximately 18% (1,089 kcals) of their original energy reserves for spawning. Results of the bioenergetics example suggest that a delay of 9 to 11 days along the lower Klickitat River may deplete their remaining energy reserves (at a rate of about 105 kcal d{sup -1}) resulting in death before spawning would occur.

Chum salmon (Oncorhynchus keta) may historically have been the most abundant species of Columbia River salmon, contributing as much as 50% of the total biomass of all salmon in the Pacific Ocean prior to the 1940's (Neave 1961). By the 1950's, however, run sizes to the Columbia River dropped dramatically and in 1999 the National Marine Fisheries Service (NMFS) listed Columbia River chum salmon as threatened under the Endangered Species Act (ESA; NMFS 1999). Habitat degradation, water diversions, harvest, and artificial propagation are the major human-induced factors that have contributed to the species decline (NMFS 1998). Columbia River chum salmon spawn exclusively in the lower river below Bonneville Dam, including an area near Ives Island. The Ives Island chum salmon are part of the Columbia River evolutionary significant unit (ESU) for this species, and are included in the ESA listing. In addition to chum salmon, fallchinook salmon (O. tshawytscha) also spawn at Ives Island. Spawning surveys conducted at Ives Island over the last several years show that chum and fallchinook salmon spawned in clusters in different locations (US Fish and Wildlife Service and Washington Department of Fish and Wildlife, unpublished data). The presence of redd clusters suggested that fish were selecting specific habitat features within the study area (Geist and Dauble 1998). Understanding the specific features of these spawning areas is needed to quantify the amount of habitat available to each species so that minimum flows can be set to protect fish and maintain high quality habitat.

Chum (Oncorhynchus keta) and fallChinook (O. tshawytscha) salmon segregate spatially during spawning in the Ives Island side channel of the lower Columbia River downstream from Bonneville Dam. Previous research during one spawning season (2000) suggested that these species selected spawning habitats based on differences in hyporheic temperature and vertical hydraulic gradient (VHG) with the river. In this study, we confirmed the spatial segregation of spawning based on hyporheic characteristics over four years (2001–2004) and examined the effects of load-following operations (power generation to meet short-term electrical demand) at Bonneville Dam on hyporheic function and characteristics. We found that during the study period, hyporheic temperature and VHG in chum salmon spawning areas were highly variable during periods of load-following operation when river levels fluctuated. In contrast, hyporheic water temperature and VHG within chum spawning areas fluctuated less when river levels were not changing due to load-following operation. Variable temperature and VHG could affect chum and fallChinook salmon spawning segregation and incubation success by altering the cues each species uses to select redd sites. Alterations in site selection would result in a breakdown in the spatial segregation of spawning between chum and fallChinook salmon, which would expose earlier spawning fallChinook eggs to a greater risk of dislodgement from later spawning chum salmon. Additional research will be required to fully assess the effects of load-following operations on the hyporheic environment and spawning and incubation success of chum and fallChinook salmon downstream from Bonneville Dam.

Fallchinook salmon (Oncorhynchus tshawytscha), thought to originate from Bonneville Hatchery, were first noted to be spawning downstream of Bonneville Dam by Washington Department of Fisheries and Wildlife (WDFW) biologists in 1993 (Hymer 1997). Known spawning areas included gravel beds on the Washington side of the river near Hamilton Creek and Ives Island. The size of this population from 1994 to 1996 was estimated at 1,800 to 5,200 fish (Hymer 1997), and 554 fish in 1998 (Van der Naald et al. 1999). These estimates were based on carcass surveys and visual observation of redds by boat near the shoreline. Pacific Northwest National Laboratory (PNNL) conducted underwater video surveys in the fall of 1999 and 2000 to determine the extent of the fallchinook salmon spawning and to estimate the number of redds occurring in deeper water. Estimates of redds occurring in water depths exceeding 2.2 m at 143,000 cubic feet per second (kcfs) were 499 in 1999 (Mueller and Dauble 1999) and 567 redds >2.2 m at 127 kcfs in 2000 (this study). The majority of the redds found were confined near the main river channel adjacent to Pierce Island. Chum salmon (O. keta) also have been documented using the mouth of Hamilton Creek and portions of Hamilton Slough for spawning. The majority of chum salmon were found to spawn in shallow water at the mouth of Hamilton Creek adjacent to Ives Island. Estimates of the natural chum salmon spawning population for 1998 were 226 (Van der Naald et al. 1999). Chum salmon spawning near Ives Island are part of the Columbia River evolutionary significant unit (ESU), and are included in the Endangered Species Act of 1973 (ESA) listing in March 1999. Our main objective of this study was to locate deep water spawning locations of fallchinook salmon in the main Columbia River channel and to collect additional data on physical habitat parameters at spawning sites. The secondary objective was to map any chum salmon redds located in the deep sections of Hamilton Slough. There are several ongoing investigations to define the physical habitat characteristics associated with fallchinook and chum salmon spawning areas downstream of Bonneville Dam. A major concern is to determine what flows (i.e., surface elevations) are necessary to ensure their long-term survival. This objective is consistent with the high priority placed by the Northwest Power Planning Council's Independent Advisory Board and the salmon managers on determining the importance of mainstem habitats to the production of salmon in the Columbia River Basin.

This report documents a four-year study to assess hydraulic conditions in the lower Snake River. The work was conducted for the Bonneville Power Administration, U.S. Department of Energy, by the Pacific Northwest National Laboratory. Cold water released from the Dworshak Reservoir hypolimnion during mid- to late-summer months cools the Clearwater River far below equilibrium temperature. The volume of released cold water augments the Clearwater River, and the combined total discharge is on the order of the Snake River discharge when the two rivers meet at their confluence near the upstream edge of Lower Granite Reservoir. With typical temperature differences between the Clearwater and Snake rivers of 10 C or more during July and August, the density difference between the two rivers during summer flow augmentation periods is sufficient to stratify Lower Granite Reservoir as well as the other three reservoirs downstream. Because cooling of the river is desirable for migrating juvenile fallChinook salmon (Oncorhynchus tshawytscha) during this same time period, the amount of mixing and cold water entrained into Lower Granite Reservoir's epilimnion at the Clearwater/Snake River confluence is of key biological importance. Data collected during this project indicates the three reservoirs downstream of Lower Granite also stratify as direct result of flow augmentation from Dworshak Reservoir. These four reservoirs are also heavily influenced by wind forcing at the water's surface and during periods of low river discharge often behave like a two-layer lake. During these periods of stratification, lower river discharge, and wind forcing, the water in the upper layer of the reservoir is held in place or moves slightly upstream. This upper layer is also exposed to surface heating and may warm up to temperatures close to equilibrium temperature. The thickness (depth) of this upper warm layer and its direction of travel may be of key biological importance to juvenile fallChinook salmon. This report describes field data collection, modeling, and analysis of hydrodynamic and temperature conditions in the Lower Granite Reservoir during the summer flow augmentation periods of 2002, 2003, and 2004. Although temperature, and hence density, differences during flow augmentation periods between the Clearwater and Snake rivers were approximately equal (7-12 C) for all four years, the discharge ratio varied which resulted in significant differences in entrainment of cooler Clearwater River water into the Lower Granite Reservoir epilimnion. However, as a direct result of system management, Lower Granite Dam tailrace temperatures were maintained near 20 C during all years. Primary differences in the other three lower Snake River reservoirs were therefore a result of meteorological conditions and dam operations, which produced variations in wind setup and surface heating. Circulation patterns in all four lower Snake River reservoirs were numerically simulated for periods of 2002, 2003, 2004, and 2005 using CE-QUAL-W2. Simulation results show that these models are capable of matching diurnal and long-term temperature and velocity changes in the reservoirs. In addition, the confluence zone of the Clearwater and Snake rivers was modeled using the three-dimensional non-hydrostatic model Flow3D. Once calibrated and validated, the reservoir models were used to investigate downstream impacts of alternative reservoir operation schemes, such as increasing or decreasing the ratio of Clearwater to Snake river discharge. Simulation results were linked with the particle tracking model FINS to develop reservoir-integrated metrics that varied due to these alternative operation schemes. Findings indicate that significant alterations in water temperature throughout the lower Snake River are possible by altering hypolimnetic discharges from Dworshak Reservoir, which may also impact the behavior of migrating juvenile fallChinook salmon during periods of flow augmentation.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

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Pacific Northwest National Laboratory conducted video-based boat surveys to identify fallchinook salmon (Oncorhynchus tshawytscha) spawning areas located in deep water (>1 m) downstream of Bonneville Dam in the fall of 2002. This report documents the number and extent of chinook salmon spawning near Ives and Pierce Islands of the Columbia River, and is the fourth in a series of reports prepared since 1999. The main objective of this study was to find deepwater spawning locations of fallchinook salmon in the main Columbia River channel, collect additional data on physical habitat parameters at spawning sites, and provide estimates of adult spawners in the surveyed area. The secondary objective was to document the occurrence of any chum salmon (O. keta) redds located in the deeper sections near below Hamilton Creek. There was a significant increase in the number of fallchinook salmon redds found in the locations surveyed during the 2002 surveys when compared to previous surveys by Pacific Northwest National Laboratory. A total of 192 redds were found in two general locations adjacent to Pierce Island (river km 228.5) encompassing an area of approximately 9.31 ha. Peak spawning activity, based on redd counts and live fish seen near redds, was on or near November 15, 2002. An estimated 1,768 fallchinook salmon redds at water depths exceeding {approx}1.m ({approx} 125 kcfs) were documented in 2002. This estimate is the expanded number based on the number of redds found within the pre-defined survey area. Fallchinook salmon redds were found at water depths from 0.9 to 8.5 m and were constructed in gravel to large cobble ranging in size from 4.83 to 13.4 cm in diameter. No chum salmon redds were found in areas surveyed during 2002, although several carcasses were found at the mouth of Woodward Creek and in the deeper sections below Hamilton Creek.

In 2007, we used radio and acoustic telemetry to evaluate the migratory behavior, survival, mortality, and delay of subyearling fallChinook salmon in the Clearwater River and Lower Granite Reservoir. Monthly releases of radio-tagged fish ({approx}95/month) were made from May through October and releases of 122-149/month acoustic-tagged fish per month were made from August through October. We compared the size at release of our tagged fish to that which could have been obtained at the same time from in-river, beach seine collections made by the Nez Perce Tribe. Had we relied on in-river collections to obtain our fish, we would have obtained very few in June from the free-flowing river but by late July and August over 90% of collected fish in the transition zone were large enough for tagging. Detection probabilities of radio-tagged subyearlings were generally high ranging from 0.60 (SE=0.22) to 1.0 (SE=0) in the different study reaches and months. Lower detection probabilities were observed in the confluence and upper reservoir reaches where fewer fish were detected. Detection probabilities of acoustic-tagged subyearlings were also high and ranged from 0.86 (SE=0.09) to 1.0 (SE=0) in the confluence and upper reservoir reaches during August through October. Estimates of the joint probability of migration and survival generally declined in a downstream direction for fish released from June through August. Estimates were lowest in the transition zone (the lower 7 km of the Clearwater River) for the June release and lowest in the confluence area for July and August releases. The joint probability of migration and survival in these reaches was higher for the September and October releases, and were similar to those of fish released in May. Both fish weight and length at tagging were significantly correlated with the joint probability of migrating and surviving for both radio-tagged and acoustic-tagged fish. For both tag types, fish that were heavier at tagging had a higher probability of successfully passing through the confluence (P=0.0050 for radio-tagged fish; P=0.0038 for acoustic-tagged fish). Radio-tagged fish with greater weight at tagging also had a higher probability of migrating and surviving through both the lower free-flowing reach (P=0.0497) and the transition zone (P=0.0007). Downstream movement rates of radio-tagged subyearlings were highest in free-flowing reaches in every month and decreased considerably with impoundment. Movement rates were slowest in the transition zone for the June and August release groups, and in the confluence reach for the July release group. For acoustic-tagged subyearlings, the slowest movement rates through the confluence and upper reservoir reaches were observed for the September release group. Radio-tagged fish released in August showed the greatest delay in the transition zone, while acoustic-tagged fish released in September showed the greatest delay in the transition zone and confluence reaches. Across the monthly release groups from July through September, the probability of delaying in the transition zone and surviving there declined throughout the study. All monthly release groups of radio-tagged subyearlings showed evidence of mortality within the transition zone, with final estimates (across the full 45-d detection period) ranging from 0.12 (SE not available) for the May release group to 0.58 (SE = 0.06) for the June release group. The May and September release groups tended to have lower mortality in the transition zone than the June, July, and August release groups. Live fish were primarily detected away from shore in the channel, whereas all dead fish were located along shorelines with most being located in the vicinity of the Memorial Bridge and immediately upstream. During the May detection period, before the implementation of summer flow augmentation, temperatures in the Clearwater River and Snake River arms of Lower Granite Reservoir and the downstream boundary of the confluence ranged from 8 to 17 C. During the June-August detection periods, however, temperatures in

The goal of this project is to develop a spawning habitat model that can be used to determine the physical habitat factors that are necessary to define the production potential for fallchinook salmon that spawn in large mainstem rivers like the Columbia River's Hanford Reach and Snake River. This project addresses RPA 155 in the NMFS 2000 Biological Opinion: Action 155: BPA, working with BOR, the Corps, EPA, and USGS, shall develop a program to: (1) Identify mainstem habitat sampling reaches, survey conditions, describe cause-and-effect relationships, and identify research needs; (2) Develop improvement plans for all mainstem reaches; and (3) Initiate improvements in three mainstem reaches. During FY 2003 we continued to collect and analyze information on fallchinook salmon spawning habitat characteristics in the Hanford Reach that will be used to address RPA 155, i.e., items 1-3 above. For example, in FY 2003: (1) We continued to survey spawning habitat in the Hanford Reach and develop a 2-dimensional hydraulic and habitat model that will be capable of predicting suitability of fallchinook salmon habitat in the Hanford Reach; (2) Monitor how hydro operations altered the physical and chemical characteristics of the river and the hyporheic zone within fallchinook salmon spawning areas in the Hanford Reach; (3) Published a paper on the impacts of the Columbia River hydroelectric system on main-stem habitats of fallchinook salmon (Dauble et al. 2003). This paper was made possible with data collected on this project; (4) Continued to analyze data collected in previous years that will ultimately be used to identify cause-and-effect relationships and identify research needs that will assist managers in the improvement of fallchinook habitat quality in main-stem reaches. During FY 2004 we plan to: (1) Complete preliminary reporting and submit papers based on the results of the project through FY 2004. Although we have proposed additional analysis of data be conducted in FY 2005, we anticipate a significant number of key papers being prepared and submitted in FY 2004 which will go toward identifying the data gaps this RPA is intended to address; (2) Make available data from this project for use on Project 2003-038-00 ('Evaluate restoration potential of Snake Riverfallchinook salmon') which is a BPA-funded project that will start in FY 2004; and (3) Present results of our work at regional and national meetings in order to facilitate technology transfer and information sharing. The objective of this project is to define the production potential of fallchinook salmon that spawn in the Hanford Reach. We will provide fisheries and resource managers with the information they need to determine if the Hanford Reach fallchinook salmon population is indeed healthy, and whether this population will be capable of seeding other satellite populations in the future. We will accomplish this purpose by continuing our on-going research at determining the carrying capacity of the Hanford Reach for producing fallchinook salmon under current operational scenarios, and then begin an assessment of whether the Reach is functioning as a model of a normative river as is widely believed. The product of our research will be a better understanding of the key habitat features for mainstem populations of anadromous salmonids, as well as a better understanding of the measures that must be taken to ensure long-term protection of the Hanford Reach fallchinook population. Although the project was originally funded in FY 1994, it was significantly redefined in FY 2000. At that time five tasks were proposed to accomplish the project objective. The purpose of this progress report is to briefly describe the activities that have been completed on each of the five tasks from FY 2000 through FY 2003.

The development of the Snake River hydroelectric system has affected fallChinook salmon smolts by shifting their migration timing to a period (mid- to late-summer) when downstream reservoir conditions are unfavorable for survival. Subsequent to the Snake RiverChinook salmon fall-run Evolutionary Significant Unit being listed as Threatened under the Endangered Species Act, recovery planning has included changes in hydrosystem operations (e.g., summer flow augmentation) to improve water temperature and flow conditions during the juvenile Chinook salmon summer migration period. In light of the limited water supplies from the Dworshak reservoir for summer flow augmentation, and the associated uncertainties regarding benefits to migrating fallChinook salmon smolts, additional approaches for improved smolt survival need to be evaluated. This report describes research conducted by the Pacific Northwest National Laboratory (PNNL) that evaluated relationships among river discharge, hyporheic zone characteristics, and egg pocket water temperature in Snake RiverfallChinook salmon spawning areas. This was a pilot-scale study to evaluate these relationships under existing operations of Hells Canyon Dam (i.e., without any prescribed manipulations of river discharge) during the 2002-2003 water year. The project was initiated in the context of examining the potential for improving juvenile Snake RiverfallChinook salmon survival by modifying the discharge operations of Hells Canyon Dam. The potential for improved survival would be gained by increasing the rate at which early life history events proceed (i.e., incubation and emergence), thereby allowing smolts to migrate through downstream reservoirs during early- to mid-summer when river conditions are more favorable for survival. PNNL implemented this research project at index sites throughout 160 km of the Hells Canyon Reach (HCR) of the Snake River. The HCR extends from Hells Canyon Dam (river kilometer [rkm] 399) downstream to the upper end of Lower Granite Reservoir near rkm 240. We randomly selected 14 fallChinook salmon spawning locations as study sites, which represents 25% of the most used spawning areas throughout the HCR. Interactions between river water and pore water within the riverbed (i.e., hyporheic zone) at each site were quantified through the use of self-contained temperature and water level data loggers suspended inside of piezometers. Surrounding the piezometer cluster at each site were 3 artificial egg pockets. In mid-November 2002, early-eyed stage fallChinook salmon eggs were placed inside of perforated polyvinyl chloride (PVC) tubes, along with a temperature data logger, and buried within the egg pockets. FallChinook salmon eggs were also incubated in the laboratory for the purpose of developing growth curves that could be used as indicators of emergence timing. The effects of discharge on vertical hydrologic exchange between the river and riverbed were inferred from measured temperature gradients between the river and riverbed, and the application of a numerical model. The hydrologic regime during the 2002-2003 sampling period exhibited one of the lowest, most stable daily discharge patterns of any of the previous 12 water years. The vertical hydraulic gradients (VHG) between the river and the riverbed suggested the potential for predominantly small magnitude vertical exchange. The VHG also showed little relationship to changes in river discharge at most sites. Despite the relatively small vertical hydraulic gradients at most sites, results from the numerical modeling of riverbed pore water velocity and hyporheic zone temperatures suggested that there was significant vertical hydrologic exchange during all time periods. The combined results of temperature monitoring and numerical modeling indicate that only 2 of 14 sites were significantly affected by short-term (hourly to daily) large magnitude changes in discharge. Although the two sites exhibited acute flux reversals between river water and hyporheic water resulting from short-term large magnitude

The area around Ives Island below Bonneville Dam on the Columbia River supports spawning populations of chum and fallchinook salmon. Because this area is sensitive to water level fluctuations caused by changes in discharge from Bonneville Dam and from tidal cycles, we initiated a study to quantify flow-dependent changes in available spawning habitat for chum and fallchinook salmon. We conducted surveys to characterize the substrates available in the Ives Island study area. Detailed bathymetry was also obtained to serve as a foundation for two-dimension hydrodynamic modeling, which was used to estimate water velocities, depths, and wetted area over a range of simulated flows. Habitat surveys were conducted and logistic regression was used to identify physical habitat variables that were important in determining the presence of chum and fallchinook salmon redds. The physical habitat data were analyzed using the logistic regression models to create probability coverages for the presence of redds in a Geographic Information System. There was generally good agreement between chum and fallchinook salmon redd locations and areas where we predicted suitable spawning habitat. We found that at Columbia River discharges less than 120 kcfs, an important chum salmon spawning area below the mouth of Hamilton Creek could only be supported by discharge from Hamilton Creek. Chum salmon did not appear to spawn in proportion to habitat availability, however our predictive model did not include all variables known to be important to chum salmon redd-site selection. Fallchinook salmon spawning habitat was less sensitive to flow and the main channel of the Columbia River along Pierce Island was predicted to contain sufficient habitat at all modeled flows.

Pacific Northwest National Laboratory conducted video-based boat surveys to identify fallChinook salmon (Oncorhynchus tshawytscha) spawning areas located in deep water (greater than 1 m) downstream of Bonneville Dam in fall 2004. This report documents the number and extent of Chinook salmon spawning near Ives and Pierce Islands of the Columbia River and is the sixth in a series of reports prepared since 1999. The main objectives of this study were to find deepwater spawning locations of fallChinook salmon in the main Columbia River channel, collect additional data on physical habitat parameters at spawning sites, and provide estimates of adult spawners in the surveyed area. The primary search area was adjacent to the upper portion of Pierce Island, and the secondary search zone was downstream of this area near the lower portion of Pierce Island. A secondary objective was to document the occurrence of any chum salmon (O. keta) redds in the deeper sections downstream of Hamilton Creek (slough zone search area). FallChinook salmon redd numbers were down slightly from the record number found during 2003. The number of fallChinook redds found in the Ives-Pierce Island complex (river km 228.5) during 2004 was 293, which does not include the number of shallow water redds found by visual observation by boat by the Oregon Department of Fish and Wildlife. The redds encompassed an area of 14.6 ha occurring adjacent to the lower part of Ives Island and Pierce Island. Peak spawning activity, based on redd counts and live fish seen near redds, was on or near November 16, 2004. An expanded redd count based on percentage video coverage in the primary and secondary search zones was 3,198 fallChinook salmon redds at water depths exceeding approximately 1.0 m (approximately 125 kcfs) with an estimated spawning population of 10,800. FallChinook salmon redds were found at water depths from 1.07 to 7.6 m and were constructed predominantly of medium cobbles ranging in size from 7.6 to 15.2 cm in diameter. Near-bed water velocity readings taken in the secondary search ranged from 0.04 to 0.98 m/s (median 0.45 m/s). No chum salmon redds were found in a limited area within the relatively deeper sections of Hamilton Slough below Hamilton Creek. No additional salmon or chum redds were found in other areas searched, including near Woodward, Tanner, and McCord Creeks.

Pacific Northwest National Laboratory conducted video-based boat surveys in fall 2003 to identify spawning areas for fallChinook salmon (Oncorhynchus tshawytscha) in deep water (>1 m) downstream of Bonneville Dam. This report documents the number and extent of Chinook salmon spawning near Ives and Pierce islands of the Columbia River, and is the fifth in a series of reports prepared since 1999. The primary objective of this study was to find deepwater spawning locations of fallChinook salmon in the main Columbia River channel, collect additional data on physical habitat parameters at spawning sites, and provide estimates of adult spawners in the surveyed area. The secondary objective was to document the occurrence of any chum salmon (O. keta) redds in the deeper sections near below Hamilton Creek. Results from the 2003 study show a continuing trend upward in the number of fallChinook salmon redds found within the survey zones. The number of fallChinook redds found in the Ives Pierce Island complex (river km 228.5) has increased by a factor of five since the surveys began in 1999. The total number of redds found during 2003 was 336, which compares to 192 in 2002, 43 in 2001, 76 in 2000, and 64 in 1999. The redds encompassed an area of 13.7 ha occurring adjacent to the lower part of Ives Island and Pierce Island. Peak spawning activity, based on redd counts and live fish seen near redds, was on or near November 24, 2003. An expanded redd count based on percentage of video coverage in the primary and secondary search zones was 3,218 fallChinook salmon redds in water exceeding 1 m deep and flowing at about 125 kcfs. FallChinook salmon redds were found at water depths from 1.07 to 7.6 m and were constructed predominantly of medium cobbles ranging from 7.6 to 15.2 cm in diameter. Two chum salmon redds were found in a small location downstream from Hamilton Creek in water depths of approximately 1 m. No salmon redds were found in other areas searched, including near Woodward, Tanner, and McCord creeks.

Redd counts were used to document the spawning distribution of fallChinook salmon (Oncorhynchus tshawytscha) in the Snake River basin upriver of Lower Granite Dam. The first reported redd counts were from aerial searches conducted intermittently between 1959 and 1978 (Irving and Bjornn 1981, Witty 1988; Groves and Chandler 1996)(Appendix 1). In 1986, the Washington Department of Fish and Wildlife began an annual monitoring program that, in addition to the Snake River, included aerial searches of the Grande Ronde River the first year (Seidel and Bugert 1987), and the Imnaha River in subsequent years (Seidel et al. 1988; Bugert et al. 1989-1991; Mendel et al. 1992). The U.S. Fish and Wildlife Service and Idaho Power Company began contributing to this effort in 1991 by increasing the number of aerial searches conducted each year and adding underwater searches in areas of the Snake River that were too deep to be searched from the air (Connor et al. 1993; Garcia et al. 1994a, 1994b, 1996-2004; Groves 1993; Groves and Chandler 1996). The Nez Perce Tribe added aerial searches in the Clearwater River basin beginning in 1988 (Arnsberg et. al 1992), and the Salmon River beginning in 1992. Currently searches are conducted cooperatively by the Nez Perce Tribe, Idaho Power Company, and U. S. Fish and Wildlife Service. Our objective for this report was to consolidate the findings from annual redd searches into a single document, containing detailed information about the searches from the most recent spawning season, and summary information from previous years. The work conducted in 2004 was funded by the Bonneville Power Administration, Idaho Power Company, and Bureau of Land Management.

Redd counts are routinely used to document the spawning distribution of fallChinook salmon (Oncorhynchus tshawytscha) in the Snake River basin upriver of Lower Granite Dam. The first reported redd counts were from aerial searches conducted intermittently between 1959 and 1978 (Irving and Bjornn 1981, Witty 1988; Groves and Chandler 1996)(Appendix 1). In 1986, the Washington Department of Fish and Wildlife began an annual monitoring program that, in addition to the Snake River, included aerial searches of the Grande Ronde River the first year (Seidel and Bugert 1987), and the Imnaha River in subsequent years (Seidel et al. 1988; Bugert et al. 1989-1991; Mendel et al. 1992). The U. S. Fish and Wildlife Service and Idaho Power Company began contributing to this effort in 1991 by increasing the number of aerial searches conducted each year and adding underwater searches in areas of the Snake River that were too deep to be searched from the air (Connor et al. 1993; Garcia et al. 1994a, 1994b, 1996-2005; Groves 1993; Groves and Chandler 1996). The Nez Perce Tribe added aerial searches in the Clearwater River basin beginning in 1988 (Arnsberg et. al 1992), and the Salmon River beginning in 1992. Currently searches are conducted cooperatively by the Nez Perce Tribe, Idaho Power Company, and U.S. Fish and Wildlife Service. Our objective for this report was to consolidate the findings from annual redd searches into a single document, containing detailed information about the searches from the most recent spawning season, and summary information from previous years. The work conducted in 2005 was funded by the Bonneville Power Administration and Idaho Power Company.

Redd counts are routinely used to document the spawning distribution of fallChinook salmon (Oncorhynchus tshawytscha) in the Snake River basin upriver of Lower Granite Dam. The first reported redd counts were from aerial searches conducted intermittently between 1959 and 1978 (Irving and Bjornn 1981, Witty 1988; Groves and Chandler 1996)(Appendix 1). In 1986, the Washington Department of Fish and Wildlife began an annual monitoring program that, in addition to the Snake River, included aerial searches of the Grande Ronde River the first year (Seidel and Bugert 1987), and the Imnaha River in subsequent years (Seidel et al. 1988; Bugert et al. 1989-1991; Mendel et al. 1992). The U. S. Fish and Wildlife Service and Idaho Power Company began contributing to this effort in 1991 by increasing the number of aerial searches conducted each year and adding underwater searches in areas of the Snake River that were too deep to be searched from the air (Connor et al. 1993; Garcia et al. 1994a, 1994b, 1996-2007; Groves 1993; Groves and Chandler 1996). The Nez Perce Tribe added aerial searches in the Clearwater River basin beginning in 1988 (Arnsberg et. al 1992), and the Salmon River beginning in 1992. Currently searches are conducted cooperatively by the Nez Perce Tribe, Idaho Power Company, and U. S. Fish and Wildlife Service. Our objective for this report was to consolidate the findings from annual redd searches counted upstream of Lower Granite Dam into a single document, containing detailed information about the searches from the most recent spawning season, and summary information from previous years. The work conducted in 2007 was funded by the Bonneville Power Administration and Idaho Power Company.

In 1979 this study was initiated to determine the distribution, contribution, and value of artificially propagated fallchinook salmon from the Columbia River. Coded wire tagging (CWT) of hatchery fallchinook salmon began in 1979 with the 1978 brood and was completed in 1982 with the 1981 brood of fish at rearing facilities on the Columbia River system. From 18 to 20 rearing facilities were involved in the study each brood year. Nearly 14 million tagged fish, about 4% of the production, were released as part of this study over the four years, 1979 through 1982. Sampling for recoveries of these tagged fish occurred from 1980 through 1986 in the sport and commercial marine fisheries from Alaska through California, Columbia River fisheries, and returns to hatcheries and adjacent streams. The National Marine Fisheries Service coordinated this study among three fishery agencies: US Fish and Wildfire Service, Oregon Department of Fish and Wildlife, and Washington Department of Fisheries. The objectives of this study were to determine the distribution, fishery contribution, survival, and value of the production of fallchinook salmon from each rearing facility on the Columbia River system to Pacific coast salmon fisheries. To achieve these objectives fish from each hatchery were given a distinctive CWT. 81 refs., 20 figs., 68 tabs.

This report summarizes results of research activities conducted in 2002 and years previous to aid in the management and recovery of fallchinook salmon Oncorhynchus tshawytscha in the Columbia River basin. The report is divided into self-standing chapters. For detailed summaries, we refer the reader to the abstracts given on the second page of each chapter. The Annual Reporting section includes information provided to fishery managers in-season and post-season, and it contains a detailed summary of life history and survival statistics on wild Snake Riverfallchinook salmon juveniles for the years 1992-2002. Peer-review publication remains a high priority of this research project, and it insures that our work meets high scientific standards. The Bibliography of Published Journal Articles section provides citations for peer-reviewed papers coauthored by personnel of project 199102900 that were written or published from 1998 to 2003.

This report summarizes results of research activities conducted in 2004 and years previous to aid in the management and recovery of fallChinook salmon Oncorhynchus tshawytscha in the Columbia River basin. For detailed summaries, we refer the reader to the abstracts given on the second page of each chapter. The Annual Reporting section includes information provided to fishery managers in-season and post-season, and it contains a detailed summary of life history and survival statistics on wild Snake RiverfallChinook salmon juveniles for the years 1992-2004. Publication is a high priority of our staff. Publication provides our results to a wide audience, and it insures that our work meets high scientific standards. The Bibliography of Published Journal Articles section provides citations for peer-reviewed papers co-authored by personnel of project 1991-02900 that were written or published from 1998 to 2005.

From 1999 through 2004, Pacific Northwest National Laboratory collected temperature data from within chum and fallChinook salmon spawning gravels and the overlying river at 21 locations in the Ives Island area approximately 5 km downstream from Bonneville Dam. Sample locations included areas where riverbed temperatures were elevated, potentially influencing alevin development and emergence timing. The study objectives were to (1) collect riverbed and river temperature data each year from the onset of spawning (October) to the end of emergence (June) and (2) provide those data in-season to fisheries management agencies to assist with fallChinook and chum salmon emergence timing estimates. Three systems were used over the life of the study. The first consisted of temperature sensors deployed inside piezometers that were screened to the riverbed or the river within chum and fallChinook salmon spawning areas. These sensors required direct access by staff to download data and were difficult to recover during high river discharge. The second system consisted of a similar arrangement but with a wire connecting the thermistor to a data logger attached to a buoy at the water surface. This system allowed for data retrieval at high river discharge but proved relatively unreliable. The third system consisted of temperature sensors installed in piezometers such that real-time data could be downloaded remotely via radio telemetry. After being downloaded, data were posted hourly on the Internet. Several times during the emergence season of each year, temperature data were downloaded manually and provided to management agencies. During 2003 and 2004, the real-time data were made available on the Internet to assist with emergence timing estimates. Examination of temperature data reveals several important patterns. Piezometer sites differ in the direction of vertical flow between surface and subsurface water. Bed temperatures in upwelling areas are more stable during salmon spawning and incubation than they are in downwelling areas. Bed temperatures in downwelling areas generally reflect river temperatures. Chum and fallChinook salmon spawning is spatially segregated, with chum salmon in upwelling areas and fallChinook salmon in downwelling areas. Although these general patterns remain similar among the years during which data were collected, differences also exist that are dependent on interannual flow characteristics.

In 2006, we continued a multi-year study to compare smolt-to-adult return rate (SAR) ratios between two groups of Snake River Basin fallChinook salmon Oncorhynchus tshawytscha that reached the sea through a combination of either (1) transportation and inriver migration or (2) bypass and inriver migration. We captured natural subyearlings rearing along the Snake and Clearwater rivers and implanted them with passive integrated transponder (PIT) tags, but knew in advance that sample sizes of natural fish would not be large enough for precise comparisons of SAR ratios. To increase sample sizes, we also cultured Lyons Ferry Hatchery subyearlings under a surrogate rearing strategy, implanted them with PIT tags, and released them into the Snake and Clearwater rivers to migrate seaward. The surrogate rearing strategy involved slowing growth at Dworshak National Fish Hatchery to match natural subyearlings in size at release as closely as possible, while insuring that all of the surrogate subyearlings were large enough for tagging (i.e., 60-mm fork length). Surrogate subyearlings were released from late May to early July 2006 to coincide with the historical period of peak beach seine catch of natural parr in the Snake and Clearwater rivers. We also PIT tagged a large representative sample of hatchery subyearlings reared under a production rearing strategy and released them into the Snake and Clearwater rivers in 2006 as part of new research on dam passage experiences (i.e., transported from a dam, dam passage via bypass, dam passage via turbine intakes or spillways). The production rearing strategy involved accelerating growth at Lyons Ferry Hatchery, sometimes followed by a few weeks of acclimation at sites along the Snake and Clearwater rivers before release from May to June. Releasing production subyearlings has been suggested as a possible alternative for making inferences on the natural population if surrogate fish were not available. Smoltto-adult return rates are not reported here, but will be presented in future reports written after workshops and input by federal, state, and tribal researchers. In this report, we compared the postrelease performance of natural subyearlings to the postrelease performance of surrogate and production subyearlings. We made this comparison to help the fisheries community determine which of the two hatchery rearing strategies produced fish that were more similar to natural subyearlings. We compared the following attributes of postrelease performance (1) detection dates at dams, (2) detections during the implementation of summer spill, (3) travel times, (4) migrant sizes, and (5) the joint probability of migration and survival. Overall, we found that postrelease performance was more similar between natural and surrogate subyearlings than between natural and production subyearlings. Further, the similarity between natural and surrogate subyearlings was greater in 2006 than in 2005, partly as the result of changes in incubation and early rearing practices we recommended based on 2005 results.

The motivation for this study was to recommend relationships for use in a model of San Joaquin fallChinook salmon. This report reviews literature pertaining to relationships between water temperature and fallChinook salmon. The report is organized into three sections that deal with temperature effects on development and timing of freshwater life stages, temperature effects on incubation survival for eggs and alevin, and temperature effects on juvenile survival. Recommendations are made for modeling temperature influences for all three life stages.

This report summarizes results of research activities conducted in 2000, 2001, and years previous to aid in the management and recovery of fallchinook salmon in the Columbia River basin. The report is divided into sections and self-standing chapters. For detailed summaries, we refer the reader to the abstracts given on the second page of each chapter. The Annual Reporting section includes information provided to fishery managers in-season and post-season, and it contains a detailed summary of life history and survival statistics on wild Snake Riverfallchinook salmon juveniles for the years 1992-2001. The Journal Manuscripts section includes complete copies of papers submitted or published during 2000 and 2001 that were not included in previous annual reports. Publication is a high priority for this project because it provides our results to a wide audience, it ensures that our work meets high scientific standards, and we believe that it is a necessary obligation of a research project. The Bibliography of Published Journal Articles section provides citations for peer-reviewed papers co-authored by personnel of project 199102900 that were published from 1998 to 2001.

Standard release-recapture analysis using Cormack-Jolly-Seber (CJS) models to estimate survival probabilities between hydroelectric facilities for Snake Riverfallchinook salmon (Oncorhynchus tschawytscha) ignore the possibility of individual fish residualizing and completing their migration in the year following tagging.

Pacific salmon Oncorhynchus spp. populations have declined over the last century due to a variety of human impacts. Chum salmon O. keta populations in the Columbia River have remained severely depressed for the past several decades, while upriver bright (URB) fallChinook salmon O. tschawytscha populations have maintained relatively healthy levels. For the past seven years we have collected data on adult spawning and juvenile emergence and outmigration of URB fallChinook and chum salmon populations in the Ives and Pierce islands complex below Bonneville Dam. In 2004, we estimated 1,733 fallChinook salmon and 336 chum salmon spawned in our study area. FallChinook salmon spawning peaked 19 November with 337 redds and chum salmon spawning peaked 3 December with 148 redds. Biological characteristics continue to suggest chum salmon in our study area are similar to nearby stocks in Hardy and Hamilton creeks, and Chinook salmon we observe are similar to upriver bright stocks. Temperature data indicated that 2004 brood URB fallChinook salmon emergence began on 6 January and ended 27 May 2005, with peak emergence occurring 12 March. Chum salmon emergence began 4 February and continued through 2 May 2005, with peak emergence occurring on 21 March. Between 13 January and 28 June, we sampled 28,984 juvenile Chinook salmon and 1,909 juvenile chum salmon. We also released 32,642 fin-marked and coded-wire tagged juvenile fallChinook salmon to assess survival. The peak catch of juvenile fallChinook salmon occurred on 18 April. Our results suggested that the majority of fallChinook salmon outmigrate during late May and early June, at 70-80 mm fork length (FL). The peak catch of juvenile chum salmon occurred 25 March. Juvenile chum salmon appeared to outmigrate at 40-55 mm FL. Outmigration of chum salmon peaked in March but extended into April and May.

This report presents the findings of the independent audit of the Rapid River Hatchery (Spring Chinook). The hatchery is located in the lower Snake River basin near Riggins Idaho. The hatchery is used for adult collection, egg incubation, and rearing of spring chinook. The audit was conducted in April 1996 as part of a two-year effort that will include 67 hatcheries and satellite facilities located on the Columbia and Snake River system in Idaho, Oregon, and Washington. The hatchery operating agencies include the US Fish and Wildlife Service, Idaho Department of Fish and Game, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

Note: This page contains sample records for the topic "river fall chinook" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
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In 2002 a total of 364 adult fallchinook and 472 chum were sampled for biological data in the Ives and Pierce islands area below Bonneville Dam. Vital statistics were developed from 290 fallchinook and 403 chum samples. The peak redd count for fallchinook was 214. The peak redd count for chum was 776. Peak spawning time for fallchinook was set at approximately 15 November. Peak spawning time for chum occurred approximately 6 December. There were estimated to be a total of 1,881 fallchinook spawning below Bonneville Dam in 2002. The study area's 2002 chum population was estimated to be 4,232 spawning fish. Temperature unit data suggests that below Bonneville Dam 2002 brood bright stock, fallchinook emergence began on February 3 2003 and ended 7 May 2003, with peak emergence occurring 20 April. 2002 brood juvenile chum emergence below Bonneville Dam began 27 January and continued through 6 April 2003. Peak chum emergence took place 1 March. A total of 10,925 juvenile chinook and 1,577 juvenile chum were sampled between the dates of 24 January and 21 July 2003 below Bonneville Dam. Juvenile chum migrated from the study area in the 40-55 mm fork length range. Migration of chum occurred during the months of March, April and May. Sampling results suggest fallchinook migration from rearing areas took place during the month of June 2003 when juvenile fallchinook were in the 65 to 80 mm fork length size range. Adult and juvenile sampling below Bonneville Dam provided information to assist in determining the stock of fallchinook and chum spawning and rearing below Bonneville Dam. Based on observed spawning times, adult age and sex composition, juvenile emergence timing, juvenile migration timing and juvenile size at the time of migration, it appears that in 2002 and 2003 the majority of fallchinook using the area below Bonneville Dam were of a late-spawning, bright stock of fallchinook. Observed spawning times, adult age and sex composition, GSI and DNA analysis, juvenile emergence timing, juvenile migration timing and juvenile size at the time of migration suggests chum spawning and rearing below Bonneville dam are similar to stocks of chum found in Hamilton and Hardy creek and are part of the Lower Columbia River Chum ESU.

This project analyzes in greater detail the coded-wire-tag (CWT) returns of Priest Rapids Hatchery fallchinook for the years 1976--1989 initially begun by Hilborn et al. (1993a). These additional analyses were prompted by suggestions made by peer reviews of the initial draft report. The initial draft and the peer review comments are included in this final report (Appendices A and B). The statistical analyses paired Priest Rapids stock with potential downriver reference stocks to isolate in-river survival rates. Thirty-three potential reference stocks were initially examined for similar ocean recovery rates; the five stocks with the most similar recovery patterns (i.e., Bonneville Brights, Cowlitz, Gray's River, Tanner Creek, and Washougal) to the Priest Rapids stock were used in the subsequent analysis of in-river survival. Three alternate forms of multiple regression models were used to investigate the relationship between predicted in-river survival and ambient conditions. Analyses were conducted with and without attempts to adjust for smolt transportation at McNary Dam. Independent variables examined in the analysis included river flows, temperature, turbidity, and spill along with the total biomass of hatchery releases in the Columbia-Snake River Basin.

In 2003 a total of 253 adult fallchinook and 113 chum were sampled for biological data in the Ives and Pierce islands area below Bonneville Dam. Vital statistics were developed from 221 fallchinook and 109 chum samples. The peak redd count for fallchinook was 190. The peak redd count for chum was 262. Peak spawning time for fallchinook was set at approximately 24 November. Peak spawning time for chum occurred approximately 24 November. There were estimated to be a total of 1,533 fallchinook spawning below Bonneville Dam in 2003. The study area's 2003 chum population was estimated to be 688 spawning fish. Temperature unit data suggests that below Bonneville Dam 2003 brood bright stock, fallchinook emergence began on January 6, 2004 and ended 28 April 2004, with peak emergence occurring 13 April. 2003 brood juvenile chum emergence below Bonneville Dam began 22 February and continued through 15 April 2004. Peak chum emergence took place 25 March. A total of 25,433 juvenile chinook and 4,864 juvenile chum were sampled between the dates of 20 January and 28 June 2004 below Bonneville Dam. Juvenile chum migrated from the study area in the 40-55 mm fork length range. Migration of chum occurred during the months of March, April and May. Sampling results suggest fallchinook migration from rearing areas took place during the month of June 2004 when juvenile fallchinook were in the 65 to 80 mm fork length size range. Adult and juvenile sampling below Bonneville Dam provided information to assist in determining the stock of fallchinook and chum spawning and rearing below Bonneville Dam. Based on observed spawning times, adult age and sex composition, juvenile emergence timing, juvenile migration timing and juvenile size at the time of migration, it appears that in 2003 all of the fallchinook using the area below Bonneville Dam were of a late-spawning, bright stock. Observed spawning times, adult age and sex composition, GSI and DNA analysis, juvenile emergence timing, juvenile migration timing and juvenile size at the time of migration suggests chum spawning and rearing below Bonneville dam are similar to stocks of chum found in Hamilton and Hardy creek and are part of the Lower Columbia River Chum ESU.

Corps of Engineers, Waterways Experiment Station (WES) as well as additional work done by Columbia Basin are provided in table 1. Hanford Reach fallChinook 1 #12;were released at river kilometer 593 with a single release profile modeled after the cumulative "1 3 W" pittag releases in the Hanford reach. All stocks were

The Pacific Northwest National Laboratory conducted this study for the Bonneville Power Administration (BPA) with funding provided through the Northwest Power and Conservation Council(a) and the BPA Fish and Wildlife Program. The study was conducted in the Hanford Reach of the Columbia River. The goal of study was to determine the physical habitat factors necessary to define the redd capacity of fallChinook salmon that spawn in large mainstem rivers like the Hanford Reach and Snake River. The study was originally commissioned in FY 1994 and then recommissioned in FY 2000 through the Fish and Wildlife Program rolling review of the Columbia River Basin projects. The work described in this report covers the period from 1994 through 2004; however, the majority of the information comes from the last four years of the study (2000 through 2004). Results from the work conducted from 1994 to 2000 were covered in an earlier report. More than any other stock of Pacific salmon, fallChinook salmon (Oncorhynchus tshawytscha) have suffered severe impacts from the hydroelectric development in the Columbia River Basin. FallChinook salmon rely heavily on mainstem habitats for all phases of their life cycle, and mainstem hydroelectric dams have inundated or blocked areas that were historically used for spawning and rearing. The natural flow pattern that existed in the historic period has been altered by the dams, which in turn have affected the physical and biological template upon which fallChinook salmon depend upon for successful reproduction. Operation of the dams to produce power to meet short-term needs in electricity (termed power peaking) produces unnatural fluctuations in flow over a 24-hour cycle. These flow fluctuations alter the physical habitat and disrupt the cues that salmon use to select spawning sites, as well as strand fish in near-shore habitat that becomes dewatered. The quality of spawning gravels has been affected by dam construction, flood protection, and agricultural and industrial development. In some cases, the riverbed is armored such that it is more difficult for spawners to move, while in other cases the intrusion of fine sediment into spawning gravels has reduced water flow to sensitive eggs and young fry. Recovery of fallChinook salmon populations may involve habitat restoration through such actions as dam removal and reservoir drawdown. In addition, habitat protection will be accomplished through set-asides of existing high-quality habitat. A key component to evaluating these actions is quantifying the salmon spawning habitat potential of a given river reach so that realistic recovery goals for salmon abundance can be developed. Quantifying salmon spawning habitat potential requires an understanding of the spawning behavior of Chinook salmon, as well as an understanding of the physical habitat where these fish spawn. Increasingly, fish biologists are recognizing that assessing the physical habitat of riverine systems where salmon spawn goes beyond measuring microhabitat like water depth, velocity, and substrate size. Geomorphic features of the river measured over a range of spatial scales set up the physical template upon which the microhabitat develops, and successful assessments of spawning habitat potential incorporate these geomorphic features. We had three primary objectives for this study. The first objective was to determine the relationship between physical habitats at different spatial scales and fallChinook salmon spawning locations. The second objective was to estimate the fallChinook salmon redd capacity for the Reach. The third objective was to suggest a protocol for determining preferable spawning reaches of fallChinook salmon. To ensure that we collected physical data within habitat that was representative of the full range of potential spawning habitat, the study area was stratified based on geomorphic features of the river using a two-dimensional river channel index that classified the river cross section into one of four shapes based on channel symmetry, depth, and width. We found t

Fisheries co-managers of U.S. v Oregon supported and directed the construction and operation of acclimation and release facilities for Snake RiverfallChinook from Lyons Ferry Hatchery at three sites above Lower Granite Dam. In 1996, Congress instructed the U.S. Army Corps of Engineers (USCOE) to construct, under the Lower Snake River Compensation Plan (LSRCP), final rearing and acclimation facilities for fallChinook in the Snake River basin to complement their activities and efforts in compensating for fish lost due to construction of the lower Snake River dams. The Nez Perce Tribe (NPT) played a key role in securing funding and selecting acclimation sites, then assumed responsibility for operation and maintenance of the facilities. In 1997, Bonneville Power Administrative (BPA) was directed to fund operations and maintenance (O&M) for the facilities. Two acclimation facilities, Captain John Rapids and Pittsburg Landing, were located on the Snake River between Asotin, WA and Hells Canyon Dam and one facility, Big Canyon, was located on the Clearwater River at Peck. The Capt. John Rapids facility is a single pond while the Pittsburg Landing and Big Canyon sites consist of portable fish rearing tanks assembled and disassembled each year. Acclimation of 450,000 yearling smolts (150,000 each facility) begins in March and ends 6 weeks later. When available, an additional 2,400,000 fallChinook sub-yearlings may be acclimated for 6 weeks, following the smolt release. The project goal is to increase the naturally spawning population of Snake RiverfallChinook salmon upstream of Lower Granite Dam. This is a supplementation project; in that hatchery produced fish are acclimated and released into the natural spawning habitat for the purpose of returning a greater number of spawners to increase natural production. Only Snake River stock is used and production of juveniles occurs at Lyons Ferry Hatchery. This is a long-term project, targeted to work towards achieving delisting goals established by National Marine Fisheries Service (NMFS or NOAA Fisheries) and ultimately to provide fallChinook adults through the Lower Snake River Compensation Plan program as mitigation for construction and operation of the four lower Snake River dams. Complete adult returns (all age classes) for all three acclimation facilities occurred in the year 2002. Progeny (which would then be natural origin fish) would be counted towards achieving Endangered Species Act delisting criteria. In 2003, a total of 2,138,391 fish weighing 66,201 pounds were released from the three acclimation facilities. The total includes 437,633 yearling fish weighing 44,330 pounds and 1,700,758 sub-yearling fish weighing 21,871 pounds.

The goals of this study are to (1) characterize the outmigration timing of different wild stocks of spring/summer chinook salmon smolts at dams on the Snake and Columbia Rivers, (2) determine if consistent patterns are apparent, and (3) determine what environmental factors influence outmigration timing. The authors PIT tagged wild spring/summer chinook salmon parr in the Snake River Basin in 1993, and subsequently monitored these fish during their smolt migration through Lower Granite, Little Goose, Lower Monumental, and McNary Dams during spring, summer, and fall 1994. This report details their findings.

We report results from an ongoing study of survival and travel time of subyearling fallChinook salmon in the Snake River during 2003 and in the Columbia River during 1999-2002. Earlier years of the study included serial releases of PIT-tagged hatchery subyearling Chinook salmon upstream from Lower Granite Dam, but these were discontinued in 2003. Instead, we estimated survival from a large number of PIT-tagged fish released upstream from Lower Granite Dam to evaluate transportation from Snake River Dams. During late May and early June 2003, 68,572 hatchery-reared subyearling fallChinook salmon were PIT tagged at Lyons Ferry Hatchery, trucked upstream, acclimated, and released at Couse Creek and Pittsburg Landing in the free-flowing Snake River. We estimated survival for these fish from release to Lower Granite Dam tailrace. In comparison to wild subyearling fallChinook salmon PIT tagged and released in the free-flowing Snake River, the hatchery fish we released traveled faster and had higher survival to Lower Granite Dam, likely because of their larger size at release. For fish left in the river to migrate we estimated survival from Lower Granite Dam tailrace to McNary Dam tailrace. Each year, a small proportion of fish released are not detected until the following spring. However, the number of fish released in 2003 that overwintered in the river and were detected as they migrated seaward as yearlings in 2004 was small (<1.0%) and had minimal effect on survival estimates. We evaluated a prototype floating PIT-tag detector deployed upstream from Lower Granite reservoir to collect data for use in partitioning travel time and survival between free-flowing and reservoir habitats. The floating detector performed poorly, detecting only 27 PIT tags in 340 h of operation from a targeted release of 68,572; far too few to partition travel time and survival between habitats. We collected river-run subyearling Chinook salmon (mostly wild fish from the Hanford Reach) at McNary Dam, PIT tagged them, and released them to the tailrace as part of an evaluation of transportation from McNary Dam in 2002. Estimated survival in 2002 from the tailrace of McNary Dam to the tailrace of John Day Dam was 0.746 (s.e. 0.036). For migration years 1999-2002, we found that in the reach from McNary to John Day Dam reach, travel time was shorter (migration rate was greater) and survival probabilities were greater when flow volume was greater. Survival was also correlated with water temperature: warmer water was associated with decreased survival, and there was an apparent survival threshold at about 19.3 C (above this temperature survival decreased substantially).

Fisheries co-managers of U.S. v Oregon supported and directed the construction and operation of acclimation and release facilities for Snake RiverfallChinook from Lyons Ferry Hatchery at three sites above Lower Granite Dam. In 1996, Congress instructed the U.S. Army Corps of Engineers (USCOE) to construct, under the Lower Snake River Compensation Plan (LSRCP), final rearing and acclimation facilities for fallChinook in the Snake River basin to complement their activities and efforts in compensating for fish lost due to construction of the lower Snake River dams. The Nez Perce Tribe (NPT) played a key role in securing funding and selecting acclimation sites, then assumed responsibility for operation and maintenance of the facilities. In 1997, Bonneville Power Administrative (BPA) was directed to fund operations and maintenance (O&M) for the facilities. Two acclimation facilities, Captain John Rapids and Pittsburg Landing, are located on the Snake River between Asotin, WA and Hells Canyon Dam and one facility, Big Canyon, is located on the Clearwater River at Peck. The Capt. John Rapids facility is a single pond while the Pittsburg Landing and Big Canyon sites consist of portable fish rearing tanks assembled and disassembled each year. Acclimation of 450,000 yearling smolts (150,000 each facility) begins in March and ends 6 weeks later. When available, an additional 2,400,000 fallChinook sub-yearlings may be acclimated for 6 weeks, following the smolt release. The project goal is to increase the naturally spawning population of Snake RiverfallChinook salmon upstream of Lower Granite Dam. This is a supplementation project; in that hatchery produced fish are acclimated and released into the natural spawning habitat for the purpose of returning a greater number of spawners to increase natural production. Only Snake River stock is used and production of juveniles occurs at Lyons Ferry Hatchery. This is a long-term project, and will ultimately work towards achieving delisting goals established by National Marine Fisheries Service (NMFS). Complete returns for all three acclimation facilities will not occur until the year 2002. Progeny (which would then be natural origin fish protected under the Endangered Species Act) from those returns will be returning for the next five years. In 2001, a total of 2,051,099 fish weighing 59,647 pounds were released from the three acclimation facilities. The total includes 318,932 yearling fish weighing 31,128 pounds and 1,732,167 sub-yearling fish weighing 28,519 pounds. Yearling fish numbers were reduced by Bacterial Kidney Disease (BKD) and sub-yearling acclimation time was limited by record low river water flows.

We develop a framework for distinguishing healthy and threatened populations, and we analyze specific criteria by which these terms can be measured for threatened populations of salmon in the Snake River. We review reports and analyze existing data on listed populations of salmon in the Snake River to establish a framework for two stages of the recovery process: (1) defining de-listing criteria, and (2) estimating the percentage increase in survival that will be necessary for recovery of the population within specified time frames, given the de-listing criteria that must be achieved. We develop and apply a simplified population model to estimate the percentage improvement in survival that will be necessary to achieve different rates of recovery. We considered five main concepts identifying de-listing criteria: (1) minimum population size, (2) rates of population change, (3) number of population subunits, (4) survival rates, and (5) driving variables. In considering minimum population size, we conclude that high variation in survival rates poses a substantially greater probability of causing extinction than does loss of genetic variation. Distinct population subunits exist and affect both the genetic variability of the population and the dynamics of population decline and growth. We distinguish between two types of population subunits, (1) genetic and (2) geographic, and we give examples of their effects on population recovery.

The population of Yakima River spring chinook salmon (Oncorhynchus tschawytscha) has been drastically reduced from historic levels reported to be as high as 250,000 adults (Smoker 1956). This reduction is the result of a series of problems including mainstem Columbia dams, dams within the Yakima itself, severely reduced flows due to irrigation diversions, outmigrant loss in irrigation canals, increased thermal and sediment loading, and overfishing. Despite these problems, the return of spring chinook to the Yakima River has continued at levels ranging from 854 to 9,442 adults since 1958. In October 1982, the Bonneville Power Administration contracted the Yakima Indian Nation to develop methods to increase production of spring chinook in the Yakima system. The Yakima Nation's current enhancement policy attempts to maintain the genetic integrity of the spring chinook stock native to the Yakima Basin. Relatively small numbers of hatchery fish have been released into the basin in past years. The goal of this study was to develop data that will be used to present management alternatives for Yakima River spring chinook. A major objective of this study is to determine the distribution, abundance and survival of wild Yakima River spring chinook. The second major objective of this study is to determine the relative effectiveness of different methods of hatchery supplementation. The last three major objectives of the study are to locate and define areas in the watershed that may be used for the rearing of spring chinook; to define strategies for enhancing natural production of spring chinook in the Yakima River; and to determine the physical and biological limitations on production within the system. 47 refs., 89 figs., 67 tabs.

This document consists of the appendices for annual report DOE/BP/39461--9 which is summarized as follows. The population of Yakima River spring chinook salmon (Oncorhynchus tschawytscha) has been drastically reduced from historic levels reported to be as high as 250,000 adults (Smoker 1956). This reduction is the result of a series of problems including mainstem Columbia dams, dams within the Yakima itself, severely reduced flows due to irrigation diversions, outmigrant loss in irrigation canals, increased thermal and sediment loading, and overfishing. Despite these problems, the return of spring chinook to the Yakima River has continued at levels ranging from 854 to 9,442 adults since 1958. In October 1982, the Bonneville Power Administration contracted the Yakima Indian Nation to develop methods to increase production of spring chinook in the Yakima system. The Yakima Nation's current enhancement policy attempts to maintain the genetic integrity of the spring chinook stock native to the Yakima Basin. Relatively small numbers of hatchery fish have been released into the basin in past years. The goal of this study was to develop data that will be used to present management alternatives for Yakima River spring chinook. A major objective of this study is to determine the distribution, abundance and survival of wild Yakima River spring chinook. The second major objective of this study is to determine the relative effectiveness of different methods of hatchery supplementation. The last three major objectives of the study are to locate and define areas in the watershed that may be used for the rearing of spring chinook; to define strategies for enhancing natural production of spring chinook in the Yakima River; and to determine the physical and biological limitations on production within the system.

The Grande Ronde River originates in the Blue Mountains in northeast Oregon and flows 334 kilometers to its confluence with the Snake River near Rogersburg, Washington. Historically, the Grande Ronde River produced an abundance of salmonids including stocks of spring, summer and fallchinook salmon, sockeye salmon, coho salmon, and summer steelhead. During the past century, numerous factors have caused the reduction of salmon stocks such that only stocks of spring chinook salmon and summer steelhead remain. The sizes of spring chinook salmon populations in the Grande Ronde basin also have been declining steadily and are substantially depressed from estimates of historic levels. It is estimated that prior to the construction of the Columbia and Snake River dams, more than 20,000 adult spring chinook salmon returned to spawn in the Grande Ronde River basin. A spawning escapement of 12,200 adults was estimated for the Grande Ronde River basin in 1957. Recent population estimates have been variable year to year, yet remain a degree of magnitude lower than historic estimates. In 1992, the escapement estimate for the basin was 1,022 adults (2.4 {times} number of redds observed). In addition to a decline in population abundance, a constriction of spring chinook salmon spawning distribution is evident in the Grande Ronde basin. Historically, 21 streams supported spawning chinook salmon, yet today the majority of production is limited to eight tributary streams and the mainstem upper Grande Ronde River. Numerous factors are thought to contribute to the decline of spring chinook salmon in the Snake River and its tributaries. These factors include passage problems and increased mortality of juvenile and adult migrants at mainstem Columbia and Snake river dams, overharvest, and habitat degradation associated with timber, agricultural, and land development practices. More than 80% of anadromous fish habitat in the upper Grande Ronde River is considered to be degraded.

The purpose was to evaluate enhancement methodologies that can be used to rebuild runs of spring chinook salmon in the Yakima River basin. The objectives were to: (1) determine the abundance, distribution and survival of naturally produced fry and smolts in the Yakima River; (2) evaluate different methods of fry and smolt supplementation into the natural rearing environment while maintaining as much as possible the gentic integrity of naturally produced stocks; (3) locate and define areas in the watershed which may be used for the rearing of spring chinook; (4) define strategies for enhancing natural production of spring chinook in the Yakima River; and (5) determine physical and biological limitations for production within the system.

Fisheries co-managers of U.S. v Oregon supported and directed the construction and operation of acclimation and release facilities for Snake RiverfallChinook from Lyons Ferry Hatchery at three sites above Lower Granite Dam. In 1996, Congress instructed the U.S. Army Corps of Engineers (USCOE) to construct, under the Lower Snake River Compensation Plan (LSRCP), final rearing and acclimation facilities for fallChinook in the Snake River basin to complement their activities and efforts in compensating for fish lost due to construction of the lower Snake River dams. The Nez Perce Tribe (NPT) played a key role in securing funding and selecting acclimation sites, then assumed responsibility for operation and maintenance of the facilities. In 1997, Bonneville Power Administrative (BPA) was directed to fund operations and maintenance (O&M) for the facilities. Two acclimation facilities, Captain John Rapids and Pittsburg Landing, are located on the Snake River between Asotin, WA and Hells Canyon Dam and one facility, Big Canyon, is located on the Clearwater River at Peck. The Capt. John Rapids facility is a single pond while the Pittsburg Landing and Big Canyon sites consist of portable fish rearing tanks assembled and disassembled each year. Acclimation of 450,000 yearling smolts (150,000 each facility) begins in March and ends 6 weeks later. When available, an additional 2,400,000 fallChinook sub-yearlings may be acclimated for 6 weeks, following the smolt release. The project goal is to increase the naturally spawning population of Snake RiverfallChinook salmon upstream of Lower Granite Dam. This is a supplementation project; in that hatchery produced fish are acclimated and released into the natural spawning habitat for the purpose of returning a greater number of spawners to increase natural production. Only Snake River stock is used and production of juveniles occurs at Lyons Ferry Hatchery. This is a long-term project, targeted to work towards achieving delisting goals established by National Marine Fisheries Service (NMFS or NOAA Fisheries) and ultimately to provide fallChinook adults through the Lower Snake River Compensation Plan program as mitigation for construction and operation of the four lower Snake River dams. Complete adult returns (all age classes) for all three acclimation facilities occurred in the year 2002. Progeny (which would then be natural origin fish) would be counted towards achieving Endangered Species Act delisting criteria. In 2002, a total of 2,877,437 fish weighing 47,347 pounds were released from the three acclimation facilities. The total includes 479,358 yearling fish weighing 33,930 pounds and 2,398,079 sub-yearling fish weighing 19,115 pounds. This is the largest number of fish ever released in one year from the acclimation facilities.

The alteration of ecological systems has greatly reduced salmon populations in the Pacific Northwest. The Hanford Reach of the Columbia River, for example, is a component of the last ecosystem in eastern Washington State that supports a relatively healthy population of fallchinook salmon ([Oncorhynchus tshawytscha], Huntington et al. 1996). This population of fallchinook may function as a metapopulation for the Mid-Columbia region (ISG 1996). Metapopulations can seed or re-colonize unused habitat through the mechanism of straying (spawning in non-natal areas) and may be critical to the salmon recovery process if lost or degraded habitat is restored (i.e., the Snake, Upper Columbia, and Yakima rivers). For these reasons, the Hanford Reach fallchinook salmon population is extremely important for preservation of the species in the Columbia River Basin. Because this population is important to the region, non-intrusive techniques of analysis are essential for researching and monitoring population trends and spawning activities.

The In Situ Redox Manipulation (ISRM) experiment is being evaluated as a potential method to remove contaminants from groundwater adjacent to the Columbia River near the 100-D Area. The ISRM experiment involves using sodium dithionate (Na{sub 2}O{sub 6}S{sub 2}) to precipitate chromate from the groundwater. The treatment will likely create anoxic conditions in the groundwater down-gradient of the ISRM treatability test site; however, the spatial extent of this anoxic plume is not exactly known. Surveys were conducted in November 1997, following the peak spawning of fallchinook salmon. Aerial surveys documented 210 redds (spawning nests) near the downstream island in locations consistent with previous surveys. Neither aerial nor underwater surveys documented fallchinook spawning in the vicinity of the ISRM treatability test site. Based on measurements of depth, velocity, and substrate, less than 1% of the study area contained suitable fallchinook salmon spawning habitat, indicating low potential for fallchinook salmon to spawn in the vicinity of the ISRM experiment.

This report presents the findings of the independent audit of the Bonneville Hatchery (Tule FallChinook). The hatchery is located on the Columbia River just west of Cascade Locks, Oregon. The hatchery is used for adult collection, egg incubation, and rearing of Tule FallChinook and URB FallChinook. The audit was conducted in April 1996 as part of a two-year effort that will include 67 hatcheries and satellite facilities located on the Columbia and Snake River system in Idaho, Oregon, and Washington. The hatchery operating agencies include the U.S. Fish and Wildlife Service, Idaho Department of Fish and Game, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife.

This report presents the findings of the independent audit of the Bonneville Hatchery (Upriver bright [URB] FallChinook). The hatchery is located on the Columbia River just west of Cascade Locks, Oregon. The hatchery is used for adult collection, egg incubation, and rearing of Tule FallChinook and URB FallChinook. The audit was conducted in April 1996 as part of at two-year effort that will include 67 hatcheries and satellite facilities located on the Columbia and Snake River system in Idaho, Oregon, and Washington. The hatchery operating agencies include the U.S. Fish and Wildlife Service, Idaho Department of Fish and Game, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife.

The smelt outmigration was monitored at wapatox on the Naches River and Prosser on the lower Yakima. The spring outmigration at Wapatox was estimated to be 16,141 smolts. The 1987 spring outmigration of wild spring chinook from the Yakima Basin was estimated to be 251,975 smolts at Prosser. The survival from egg to smelt was calculated using the 1985 redd counts and the 1987 smolt outmigration at Prosser. The estimated survival was 4.16%, which gives a mean egg to smolt survival over four years of 6.32%. In 1987 a total of 3,683 adult and 335 jack spring chinook salmon returning to the Yakima River were counted at Prosser fish ladder. This gives a total of 4,018 salmon returning to Prosser Dam. The median dates of passage were May 12 and May 16 for adults and jacks respectively. An additional 372 fish were estimated to have been caught in the Yakima River subsistence dipnet fishery below Horn Rapids and Prosser Dams. Therefore, total return to the Yakima system was 4,390 spring chinook salmon. Spring chinook were counted at Roza Dam from May 1 to September 30, 1987. Passage at Roza Dam was 1,610 adult and 67 jack spring chinook for a total of 1,677 wild fish. The median dates of passage at Roza Dam were May 29 and May 26 for spring chinook adults and jacks respectively. The smolt to adult (S{sub sa}) survival was calculated based on the 1983 smelt outmigration estimated at Prosser and the 1984 return of jacks (3 year old fish) the 1985 return of four year old adults, and the 1986 return of five year old fish to the Yakima River. It was estimated that 6,012 wild three, four, and five year old fish returned from an estimated smolt outmigration of 135,548 fish in 1983. This gives an estimated survival from smolt to adult of 4.4%. The smolt to adult survival for the 1984 smolt outmigration was 5.3% with 423 jacks returning in 1985, 5,163 four year old adults returning in 1986, and 983 five year old fish returning in 1987 fran an estimated 123,732 smolts in 1984. Spring chinook adults from fourteen different hatchery release groups were recovered in 1987. A total of 211 coded wire tags were recovered and these were expanded to an estimated 253 returning hatchery fish in 1987. Nine of these fish were jacks.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

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to obtain the most current and comprehensive results.

In 2001 a total of 309 adult fallchinook and 264 chum were sampled in the Ives and Pierce islands area below Bonneville Dam. The peak redd count for fallchinook was 48. The peak redd count for chum was 181. Peak spawning time for fallchinook was set at approximately 16 November. Peak spawning time for chum occurred approximately 26 November. There were estimated to be a total of 721 fallchinook spawning below Bonneville Dam in 2001. The 2001 chum population below Bonneville Dam was estimated to be 532 spawning fish. Temperature unit data suggests that below Bonneville Dam 2001 brood chinook emergence began on 11 March 2002 and ended 18 May 2002, with peak emergence occurring 26 April. 2001 brood juvenile chum emergence below Bonneville Dam began 29 January and continued through 31 March 2002. Peak chum emergence took place 25 February. A total of 5,487 juvenile chinook and 678 juvenile chum were sampled between the dates of 22 January and 30 July 2002 below Bonneville Dam. Juvenile chum migrated from the study area in the 40-55 mm fork length range. Migration of chum occurred during the months of March, April and May. Sampling results suggest fallchinook migration from rearing areas took place from mid June through early July 2002 when juvenile fallchinook were in the 65 to 80 mm fork length size range. Adult and juvenile sampling below Bonneville Dam provided information to assist in determining the stock of fallchinook and chum spawning and rearing below Bonneville Dam. Based on observed spawning times, adult age and sex composition, GSI analysis, juvenile emergence timing, juvenile migration timing and juvenile size at the time of migration, it appears that in 2001 and 2002 the majority of fallchinook using the area below Bonneville Dam were of a late-spawning bright stock of fallchinook. Observed spawning times, adult age and sex composition, GSI analysis, juvenile emergence timing, juvenile migration timing and juvenile size at the time of migration suggests chum spawning and rearing below Bonneville dam are similar to stocks of chum found in Hamilton and Hardy creek and are part of the Lower Columbia River Chum ESU.

Migration patterns of adult spring chinook salmon above Willamette Falls differed depending on when the fish passed the Falls, with considerable among-fish variability. Early-run fish often terminated their migration for extended periods of time, in association with increased flows and decreased temperatures. Mid-run fish tended to migrate steadily upstream at a rate of 30-40 km/day. Late-run fish frequently ceased migrating or fell back downstream after migrating 10-200 km up the Willamette River or its tributaries; this appeared to be associated with warming water during summer and resulted in considerable mortality. Up to 40% of the adult salmon entering the Willamette River System above Willamette Falls (i.e. counted at the ladder) may die before reaching upriver spawning areas. Up to 10% of the fish passing up over Willamette Falls may fall-back below the Falls; some migrate to the Columbia River or lower Willamette River tributaries. If rearing conditions at hatcheries affect timing of adult returns because of different juvenile development rates and improper timing of smolt releases, then differential mortality in the freshwater segment of the adult migrations may confound interpretation of studies evaluating rearing practices.

This report describes work conducted by the Oregon Department of Fish and Wildlife (ODFW) and the Washington Department of Fish and Wildlife (WDFW) from 1 October 2000 to 30 September 2001. The work is part of studies to evaluate spawning of fallchinook salmon (Oncorhynchus tshawytscha) and chum salmon (O. keta) below the four lowermost Columbia River dams under the Bonneville Power Administration's Project 99-003. The purpose of this project is twofold: (1) Document the existence of fallchinook and chum populations spawning below Bonneville Dam (river mile (RM) 145), The Dalles Dam (RM 192), John Day Dam (RM 216), and McNary Dam (RM 292) (Figure 1) and estimate the size of these populations. (2) Profile stocks for important population characteristics; including spawning time, genetic make-up, emergence timing, migration size and timing, and juvenile to adult survival rates. Specific tasks conducted by ODFW and WDFW during this period were: (1) Documentation of fallchinook and chum spawning below Bonneville, The Dalles, John Day and McNary dams using on-water observations; (2) Collection of biological data to profile stocks in areas described in Task 1; (3) Determination of spawning population estimates and age composition, average size at return, and sex ratios in order to profile stocks in areas described in Task 1; (4) Collection of data to determine stock origin of adult salmon found in areas described in Task 1; (5) Determination of possible stock origins of adult salmon found in areas described in Task 1 using tag rates based on coded-wire tag recoveries and genetic baseline analysis; (6) Determination of emergence timing and hatching rate of juvenile fallchinook and chum below Bonneville Dam; (7) Determination of migration time and size for juvenile fallchinook and chum rearing in the area described in Task 6; (8) Investigation of feasibility of determining stock composition of juvenile fallchinook and chum rearing in the area described in Task 6; (9) Documentation of entrapment in low-lying areas of juvenile fallchinook and chum rearing in the area described in Task 6; and (10) Investigation of feasibility of determining juvenile to adult survival rate from coded-wire tagged juvenile fallchinook captured and tagged in the area described in Task 6.

This report describes work conducted by the Oregon Department of Fish and Wildlife (ODFW) and the Washington Department of Fish and Wildlife (WDFW) from 1 October 1998 to 30 September 1999. The work is part of studies to evaluate spawning of fallchinook salmon (Oncorhynchus tshawytscha) and chum salmon (O. keta) below the four lowermost Columbia River dams under the Bonneville Power Administration's Project 99-003. The purpose of this project is twofold: (1) Document the existence of fallchinook and chum populations spawning below Bonneville Dam (river mile (RM) 145), The Dalles Dam (RM 192), John Day Dam (RM 216), and McNary Dam (RM 292) (Figure 1) and estimate the size of these populations; and (2) Profile stocks for important population characteristics; including spawning time, genetic make-up, emergence timing, migration size and timing, and juvenile to adult survival rates. Specific tasks conducted by ODFW and WDFW during this period were: (1) Documentation of fallchinook and chum spawning below Bonneville, The Dalles, John Day and McNary dams using on-water observations; (2) Collection of biological data to profile stocks in areas described in Task 1; (3) Determination of spawning population estimates and age composition, average size at return, and sex ratios in order to profile stocks in areas described in Task 1; (4) Collection of data to determine stock origin of adult salmon found in areas described in Task 1; (5) Determination of possible stock origins of adult salmon found in areas described in Task 1 using tag rates based on coded-wire tag recoveries and genetic baseline analysis; (6) Determination of emergence timing and hatching rate of juvenile fallchinook and chum below Bonneville Dam; (7) Determination of migration time and size for juvenile fallchinook and chum rearing in the area described in Task 6; (8) Investigation of feasibility of determining stock composition of juvenile fallchinook and chum rearing in the area described in Task 6; (9) Documentation of stranding and entrapment in low-lying areas of juvenile fallchinook and chum rearing in the area described in Task 6; and (10) Investigation of feasibility of coded-wire tagging juvenile fallchinook captured in the area described in Task 6 to determine juvenile to adult survival rate.

This report describes work conducted by the Oregon Department of Fish and Wildlife (ODFW) and the Washington Department of Fish and Wildlife (WDFW) from 1 October 1999 to 30 September 2000. The work is part of studies to evaluate spawning of fallchinook salmon (Oncorhynchus tshawytscha) and chum salmon (O. keta) below the four lowermost Columbia River dams under the Bonneville Power Administration's Project 99-003. The purpose of this project is twofold: (1) Document the existence of fallchinook and chum populations spawning below Bonneville Dam (river mile (RM) 145), The Dalles Dam (RM 192), John Day Dam (RM 216), and McNary Dam (RM 292) (Figure 1) and estimate the size of these populations; and (2) Profile stocks for important population characteristics; including spawning time, genetic make-up, emergence timing, migration size and timing, and juvenile to adult survival rates.

This report presents the findings of the independent audit of the Spring Creek National Fish Hatchery (Tule FallChinook). The hatchery is located along the Columbia River at Underwood, Washington, approximately 30 miles upstream of Bonneville Dam. The hatchery is used for adult collection, egg incubation, and rearing of Tule Fallchinook. The audit was conducted in April 1996 as part of a two-year effort that will include 67 hatcheries and satellite facilities located on the Columbia and Snake River system in Idaho, Oregon, and Washington. The hatchery operating agencies include the US Fish and Wildlife Service, Idaho Department of Fish and Game, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife.

Department of Fish and Game Department of Fish and Game Captive Rearing Initiative for Salmon RiverChinook Salmon Finding of No Significant Impact October 2000 DEPARTMENT OF ENERGY Bonneville Power Administration Idaho Department of Fish and Game Captive Rearing Initiative for Salmon RiverChinook Salmon Finding of No Significant Impact Summary: Bonneville Power Administration (BPA), Department of Energy (DOE), is proposing to fund the Idaho Department of Fish and Game (IDFG) Captive Rearing Initiative for Salmon RiverChinook Salmon Program (IDFG Program). The IDFG Program is a small-scale research and production initiative designed to increase numbers of three weak but recoverable populations of spring/summer chinook salmon in the Salmon River drainage. This would increase numbers of spring/summer chinook salmon within the Snake River

As part of the presupplementation planning, baseline data on the productivity of spring chinook salmon (Oncorhynchus tshawytscha) in the Yakima River have been collected. However, for adult salmonids, data on habitat use, delays in passage at irrigation diversions, migration rates, and substock separation had not been previously collected. In 1991, the National Marine Fisheries Service began a 2-year radio-telemetry study of adult spring chinook salmon in the Yakima River Basin. Specific objectives addressed in this study were: to determine spawning populations` run timing, passage patterns at irrigation diversion dams, and morphometric characteristics to determine where and when substocks become separated; to evaluate fish passage at Yakima River Basin diversion dams including Prosser, Sunnyside, Wapato, Roza, Town Diversion, Easton, Cowiche, and Wapatox Dams; to determine spring chinook salmon migration rates between Yakima River Basin dams, prespawning behavior, temporal distribution, and habitat utilization; to identify spawning distribution and timing of spring chinook salmon; to determine the amount and cause of prespawning mortality of spring chinook salmon; and to evaluate adult fish-handling procedures for the right-bank, adult-trapping facility at Prosser Dam.

The goal of this project is to compare net-pen rearing methods to traditional hatchery methods of rearing upriver bright fallchinook salmon (Oncorhynchus tshawvtscha). Fish were reared at several densities in net pens at three Columbia River backwater sites during 1984-1987, and in a barrier net at one site during 1984-1986; methods included both fed and unfed treatments. The purpose of this report is to summarize the results obtained from the unfed treatments and the current return of adults from all fed treatments and the barrier net. Zooplankton were the primary food item of unfed fish. Fish reared in net pens utilized insects colonizing the nets as an additional food source, whereas those reared in the barrier net did not. Growth and production of fish reared in the unfed treatments were low. Instantaneous growth rates of unfed fish were much lower than those of the fed treatments and hatchery controls except when zooplankton densities were high and chironomid larvae were important in the diet of unfed fish reared in pens. Only fish in the barrier net treatment resulted in consistent net gains in growth and production over the rearing periods. Adult returns of fish from all fed and unfed treatments are lower than those of control fish reared at the hatchery. Returns appear to be inversely related to rearing density. Even though adult returns are lower than those of traditional hatchery methods, a cost-benefit analysis, as return data becomes more complete, may prove these methods to be an economical means of expanding current hatchery production, particularly if thinning releases were used.

We PIT tagged wild spring/summer chinook salmon parr in the Snake River Basin in 1995 and subsequently monitored these fish during their smolt migration through Lower Granite, Little Goose, Lower Monumental, McNary, John Day, and Bonneville Dams during spring and summer 1996.

The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the eleventh season (1997-2007) of adult Chinook salmon broodstock collection in the Lostine River and the ninth season (1999-2007) of acclimation of resulting Lostine River progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progeny for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies In 2007, acclimation of Lostine River spring Chinook salmon smolts occurred from 3/5/07 through to 4/17/07 and a total of 230,010 smolts were acclimated and released. These smolts were produced from the brood year (BY) 2005 egg source and included captive brood (24,604) and conventional (205,406) origin smolts that were all progeny of Lostine River spring Chinook salmon. Operation of the Lostine River adult monitoring and collection facility in 2007 began May 14th. The first Chinook was captured on June 2, 2007 and the last Chinook was captured on September 25, 2007. The weir and trap were removed on October 1, 2007. A total of 637 adult Chinook, including jacks, were captured during the season. The composition of the run included 240 natural origin fish and 397 hatchery supplementation fish. There were no identified 'stray' hatchery fish from other programs trapped. Of the fish captured, 41 natural and 81 hatchery supplementation adults were retained for broodstock and transported to LGH for holding and spawning, 403 adult Chinook were passed or transported above the weir to spawn naturally, and only hatchery origin jack Chinook were transported and outplanted in the Wallowa River and Bear Creek in underseeded habitat. Of the 122 adult fish retained for broodstock, 20 natural females and 40 supplementation females were represented in spawning. The eggs from these females produced a total of 267,350 eggs at fertilization. Eye-up was 86.73% which yielded a total of 231,882 conventional program eyed eggs. The fecundity averaged 4,456 eggs per female. These eggs will be incubated and reared at Lookingglass Hatchery until they are smolts in the spring of 2009. Captive brood program eggs/fish will be added to the conventional program eggs to make up the entire juvenile release for the Lostine River program in 2009. Due to the success of the 2007 egg collection, the number of fish produced exceeded program needs and facility capabilities. As a result, there are plans to outplant fry in 2008 and parr in early 2009 to underseeded habitat in the Wallowa River.

The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the tenth season (1997-2006) of adult Chinook salmon broodstock collection in the Lostine River and the eighth season (1999-2006) of acclimation of resulting Lostine River progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progeny for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies In 2006, acclimation of Lostine River spring Chinook salmon smolts occurred from February 27, 2006 through to April 10, 2006 and a total of 240,568 smolts were acclimated and released. These smolts were produced from the brood year (BY) 2004 egg source and included captive brood (40,982) and conventional (199,586) origin smolts that were all progeny of Lostine River spring Chinook salmon. Operation of the Lostine River adult monitoring and collection facility in 2006 began May 15th, the first Chinook was captured on June 14, 2006 and the last Chinook was captured on September 27, 2006. The weir and trap were removed on October 1, 2006. A total of 534 adult Chinook, including jacks, were captured during the season. The composition of the run included 205 natural origin fish and 329 hatchery supplementation fish. There were no identified 'stray' hatchery fish from other programs trapped. Of the fish captured, 33 natural and 120 hatchery supplementation adults were retained for broodstock and transported to LGH for holding and spawning and 397 adult Chinook were passed or transported above the weir to spawn naturally. In 2006, no hatchery origin adult Chinook were transported and out planted in the Wallowa River and Bear Creek to spawn in under seeded habitat. In order to meet egg take goals for the conventional portion of the program, a determination was made that approximately 147 adults were needed for broodstock. As a result 16 (8 males and 8 females) of the 153 fish collected for broodstock were returned to the Lostine River to spawn naturally. Females that were spawned and provided the brood source were made up of 12 natural females and 45 supplementation females. One of these females tested positive for high levels of Bacterial Kidney Disease and consequently this females eggs were destroyed. The remaining females produced a total of 241,372 eggs at fertilization. Eye-up was 85.47% which yielded a total of 206,309 conventional program eyed eggs. The fecundity averaged 4,162 eggs per female. The brood year 2006 eggs will be incubated and reared at Lookingglass Hatchery until

The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the eighth season (1997-2004) of adult Chinook salmon broodstock collection in the Lostine River and the sixth season (1999-2004) of acclimation of resulting Lostine River progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progency for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies. In 2004, acclimation of Lostine River spring Chinook salmon smolts occurred from March 1, 2004 through to April 14, 2004 and a total of 250,249 smolts were acclimated and released. These smolts were produced from the brood year (BY) 2002 egg source and included captive brood (133,781) and conventional (116,468) origin smolts that were all progeny of Lostine River spring Chinook salmon. Operation of the Lostine River adult monitoring and collection facility in 2004 began May 10, the first Chinook was captured on May 19, 2004 and the last Chinook was captured on September 16, 2004. The weir and trap were removed on October 1, 2004. A total of 1,091 adult Chinook, including jacks, were captured during the season. The composition of the run included 299 natural origin fish and 792 hatchery supplementation fish. There were no identified 'stray' hatchery fish from other programs trapped. Of the fish captured, 46 natural and 69 hatchery supplementation adults were retained for broodstock and transported to Lookingglass Hatchery for holding and spawning, 537 adult Chinook were passed or transported above the weir to spawn naturally, and 447 hatchery origin adult Chinook were transported and outplanted in the Wallowa River and Bear Creek to spawn in underseeded habitat. Of the 107 adults retained (eight additional hatchery females were collected and then later returned to the Lostine River to spawn naturally) for broodstock at Lookingglass Hatchery, 22 natural females and 30 supplementation females were represented in spawning. These females produced a total of 221,889 eggs at fertilization. Eye-up was 94.9% which yielded a total of 210,661 conventional program eyed eggs. The fecundity averaged 4,267 eggs per female. These eggs were incubated and at Lookingglass Hatchery until eyed stage and then transferred to Oxbow Hatchery where they will be reared to the fingerling stage. They will then be transported back to LGH and reared to the smolt stage and then transported to the Lostine acclimation facility for release in the spring of 2006. Captive brood program eggs/fish will be added to

The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the seventh season (1997-2003) of adult Chinook salmon broodstock collection in the Lostine River and the fifth season (1999-2003) of acclimating the resultant progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progeny for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies. In 2003, acclimation of Lostine River spring Chinook salmon smolts occurred from March 3, 2003 through to April 14, 2003 and a total of 242,776 smolts were acclimated and released. These smolts were produced from the brood year (BY) 2001 egg source and included captive broodstock (141,860) and conventional broodstock (100,916) origin smolts that were all progeny of Lostine River spring Chinook salmon. Operation of the Lostine River adult monitoring and collection facility in 2003 began April 30th, the first Chinook was captured on May 16, 2003 and the last Chinook was captured on September 21, 2003. The weir and trap were removed on October 1, 2003. A total of 464 adult Chinook, including jacks, were captured during the season. The composition of the run included 239 natural origin fish and 225 hatchery supplementation fish. There were no identified 'stray' hatchery fish from other programs trapped. Of the fish captured, 45 natural and 4 hatchery supplementation adults were retained for broodstock and transported to LGH for holding and spawning, 366 adult Chinook were passed or transported above the weir to spawn naturally, and 49 hatchery origin adult jack Chinook were transported and outplanted in the Wallowa River and Bear Creek to spawn in underseeded habitat. Of the 49 adults retained for broodstock at Lookingglass Hatchery, 21 natural females and no hatchery origin females were represented in spawning. These females produced a total of 106,609 eggs at fertilization. Eye-up was 95.50% which yielded a total of 101,811 conventional program eyed eggs. The fecundity averaged 5,077 eggs per female. These eggs were incubated and at Lookingglass Hatchery until eyed stage. At eye they were transferred to Oxbow Hatchery where they were reared to the fingerling state at which time they were transported back to LGH until they were smolts in the spring of 2005. Captive brood program eggs/fish will be added to the conventional program eggs to make up the entire juvenile release for the Lostine River program in 2005.

This publication concerns the investigation of potential relationships between various landscape habitat variables and estimates of fish production from 25 index stocks of spring/summer chinook salmon with the Columbia River Basin.

This study was designed to describe aspects of the life history strategies of spring chinook salmon in the Grande Ronde basin. During the past year we focused on rearing and migration patterns of juveniles and surveys of spawning adults. The specific objectives for the early life history portion of the study were: Objective 1, document the annual in-basin migration patterns for spring chinook salmon juveniles in the upper Grande Ronde River, including the abundance of migrants, migration timing and duration; Objective 2, estimate and compare smolt survival indices to mainstem Columbia and Snake River dams for fall and spring migrating spring chinook salmon; Objective 3 initiate study of the winter habitat utilized by spring chinook salmon in the Grande Ronde River basin. The specific objectives for the spawning ground surveys were: Objective 4, conduct extensive and supplemental spring chinook salmon spawning ground surveys in spawning streams in the Grande Ronde and Imnaha basin, Objective 5; determine how adequately historic index area surveys index spawner abundance by comparing index counts to extensive and supplemental redd counts; Objective 6, determine what changes in index areas and timing of index surveys would improve the accuracy of index surveys; Objective 7, determine the relationship between number of redds observed and fish escapement for the Grande Ronde and Imnaha river basins.

We determined migration timing and abundance of juvenile spring chinook salmon Oncorhynchus tshawytscha and juvenile steelhead/rainbow trout Oncorhynchus mykiss using rotary screw traps on four streams in the Grande Ronde River basin during the 2001 migratory year (MY 2001) from 1 July 2000 through 30 June 2001. Based on migration timing and abundance, two distinct life-history strategies of juvenile spring chinook and O. mykiss could be distinguished. An 'early' migrant group left upper rearing areas from 1 July 2000 through 29 January 2001 with a peak in the fall. A 'late' migrant group descended from upper rearing areas from 30 January 2001 through 30 June 2001 with a peak in the spring. The migrant population of juvenile spring chinook salmon in the upper Grande Ronde River in MY 2001 was very low in comparison to previous migratory years. We estimated 51 juvenile spring chinook migrated out of upper rearing areas with approximately 12% of the migrant population leaving as early migrants to overwinter downstream. In the same migratory year, we estimated 16,067 O. mykiss migrants left upper rearing areas with approximately 4% of these fish descending the upper Grande Ronde River as early migrants. At the Catherine Creek trap, we estimated 21,937 juvenile spring chinook migrants in MY 2001. Of these migrants, 87% left upper rearing areas early to overwinter downstream. We also estimated 20,586 O. mykiss migrants in Catherine Creek with 44% leaving upper rearing areas early to overwinter downstream. At the Lostine River trap, we estimated 13,610 juvenile spring chinook migrated out of upper rearing areas with approximately 77% migrating early. We estimated 16,690 O. mykiss migrated out of the Lostine River with approximately 46% descending the river as early migrants. At the Minam River trap, we estimated 28,209 juvenile spring chinook migrated out of the river with 36% migrating early. During the same period, we estimated 28,113 O. mykiss with approximately 14% of these fish leaving as early migrants. Juvenile spring chinook salmon PIT-tagged at trap sites in the fall and in upper rearing areas during winter were used to compare migration timing and survival to Lower Granite Dam of the early and late migrant groups. Juvenile spring chinook tagged on the upper Grande Ronde River were detected at Lower Granite Dam from 4 May to 20 May 2001, with a median passage date of 17 May. Too few fish were collected and tagged to conduct detection rate and survival comparisons between migrant groups. PIT-tagged salmon from Catherine Creek trap were detected at Lower Granite Dam from 27 April to 13 July 2001. Early migrants were detected significantly earlier (median = 10 May) than late migrants (median = 1 June). Also, early migrants from Catherine Creek were detected at a significantly higher rate than fish tagged in upper rearing areas in the winter, suggesting better survival for fish that migrated out of upper rearing areas in the fall. Juvenile spring chinook salmon from the Lostine River were detected at Lower Granite Dam from 2 April through 4 July 2001. Early migrants were detected significantly earlier (median = 27 April) than late migrants (median = 14 May). However, there was no difference in detection rates between early and late migrants. Survival probabilities showed similar patterns as dam detection rates. Juvenile spring chinook salmon from the Minam River were detected at Lower Granite Dam from 8 April through 18 August 2001. Early migrants were detected significantly earlier (median = 28 April) than late migrants (median = 14 May). Late migrants from the Minam River were tagged at the trap in the spring. Spring chinook salmon parr PIT-tagged in summer 2000 on Catherine Creek and the Imnaha, Lostine, and Minam rivers were detected at Lower Granite Dam over an 87 d period from 8 April to 3 July 2001. The migratory period of individual populations ranged from 51 d (Imnaha River) to 67 d (Catherine Creek) in length. Median dates of migration ranged from 30 April (Imnaha River) to 17 May (Catherine Creek). Detection ra

Accurate determination of adult salmon spawner abundance is key to the assessment of recovery actions for wild Snake River spring/summer Chinook salmon (Onchorynchus tshawytscha), a species listed as 'threatened' under the Endangered Species Act (ESA). As part of the Bonneville Power Administration Fish and Wildlife Program, the Nez Perce Tribe operates an experimental project in the South Fork of the Salmon River subbasin. The project has involved noninvasive monitoring of Chinook salmon escapement on the Secesh River between 1997 and 2000 and on Lake Creek since 1998. The overall goal of this project is to accurately estimate adult Chinook salmon spawning escapement numbers to the Secesh River and Lake Creek. Using time-lapse underwater video technology in conjunction with their fish counting stations, Nez Perce researchers have successfully collected information on adult Chinook salmon spawner abundance, run timing, and fish-per-redd numbers on Lake Creek since 1998. However, the larger stream environment in the Secesh River prevented successful implementation of the underwater video technique to enumerate adult Chinook salmon abundance. High stream discharge and debris loads in the Secesh caused failure of the temporary fish counting station, preventing coverage of the early migrating portion of the spawning run. Accurate adult abundance information could not be obtained on the Secesh with the underwater video method. Consequently, the Nez Perce Tribe now is evaluating advanced technologies and methodologies for measuring adult Chinook salmon abundance in the Secesh River. In 2003, the use of an acoustic camera for assessing spawner escapement was examined. Pacific Northwest National Laboratory, in a collaborative arrangement with the Nez Perce Tribe, provided the technical expertise to implement the acoustic camera component of the counting station on the Secesh River. This report documents the first year of a proposed three-year study to determine the efficacy of using an acoustic camera to count adult migrant Chinook salmon as they make their way to the spawning grounds on the Secesh River and Lake Creek. A phased approach to applying the acoustic camera was proposed, starting with testing and evaluation in spring 2003, followed by a full implementation in 2004 and 2005. The goal of this effort is to better assess the early run components when water clarity and night visibility preclude the use of optical techniques. A single acoustic camera was used to test the technology for enumerating adult salmon passage at the Secesh River. The acoustic camera was deployed on the Secesh at a site engineered with an artificial substrate to control the river bottom morphometry and the passage channel. The primary goal of the analysis for this first year of deployment was to validate counts of migrant salmon. The validation plan involved covering the area with optical video cameras so that both optical and acoustic camera images of the same viewing region could be acquired simultaneously. A secondary test was contrived after the fish passage was complete using a controlled setting at the Pacific Northwest National Laboratory in Richland, Washington, in which we tested the detectability as a function of turbidity levels. Optical and acoustic camera multiplexed video recordings of adult Chinook salmon were made at the Secesh River fish counting station from August 20 through August 29, 2003. The acoustic camera performed as well as or better than the optical camera at detecting adult Chinook salmon over the 10-day test period. However, the acoustic camera was not perfect; the data reflected adult Chinook salmon detections made by the optical camera that were missed by the acoustic camera. The conditions for counting using the optical camera were near ideal, with shallow clear water and good light penetration. The relative performance of the acoustic camera is expected to be even better than the optical camera in early spring when water clarity and light penetration are limited. Results of the laboratory tests at the Pacific North

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This study was designed to document and describe the status and life history strategies of spring Chinook salmon and summer steelhead in the Grande Ronde River Subbasin. We determined migration timing, abundance, and life-stage survival rates for juvenile spring Chinook salmon Oncorhynchus tshawytscha and summer steelhead O. mykiss in four streams during migratory year 2008 from 1 July 2007 through 30 June 2008. As observed in previous years of this study, spring Chinook salmon and steelhead exhibited fall and spring movements out of natal rearing areas, but did not begin their smolt migration through the Snake and lower Columbia River hydrosystem until spring. In this report we provide estimates of migrant abundance and migration timing for each study stream, and their survival and timing to Lower Granite Dam. We also document aquatic habitat conditions using water temperature and stream flow in four study streams in the subbasin.

Bonneville Power Administration (BPA) is proposing to fund the Tucannon River Spring Chinook Captive Broodstock Program, a small-scale production initiative designed to increase numbers of a weak but potentially recoverable population of spring chinook salmon in the Tucannon River in the State of Washington. BPA has prepared an Environmental Assessment (EA) (DOE/EA-l326) evaluating the proposed project. Based on the analysis in the EA, BPA has determined that the proposed action is not a major Federal action significantly affecting the quality of the human environment, within the meaning of the National Environmental Policy Act (NEPA) of 1969. Therefore, the preparation of an Environmental Impact Statement (EIS) is not required, and BPA is issuing this Finding of No Significant Impact (FONSI).

This report presents the findings of the independent audit of the Lyons Ferry Hatchery (FallChinook). The audit is being conducted as a requirement of the Northwest Power Planning Council (NPPC) ``Strategy for Salmon`` and the Columbia River Basin Fish and Wildlife Program. Under the audit, the hatcheries are evaluated against policies and related performance measures developed by the Integrated Hatchery Operations Team (IHOT). IHOT is a multi-agency group established by the NPPC to direct the development of new basinwide standards for managing and operating fish hatcheries. The audit was conducted in April 1996 as part of a two-year effort that will include 67 hatcheries and satellite facilities located on the Columbia and Snake River system in Idaho, Oregon, and Washington. The hatchery operating agencies include the US Fish and Wildlife Service, Idaho Department of Fish and Game, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife.

During 1999, the Idaho Department of Fish and Game (IDFG) continued developing techniques for the captive rearing of chinook salmon Oncorhynchus tshawytscha. Techniques under development included protocols for rearing juveniles in freshwater and saltwater hatchery environments, and fieldwork to collect brood year 1998 and 1999 juveniles and eggs and to investigate the ability of these fish to spawn naturally. Fish collected as juveniles were held for a short time at the Sawtooth Fish Hatchery and later transferred to the Eagle Fish Hatchery for rearing. Eyed-eggs were transferred immediately to the Eagle Fish Hatchery where they were disinfected and reared by family groups. When fish from either collection method reached approximately 60 mm, they were PIT tagged and reared separately by brood year and source stream. Sixteen different groups were in culture at IDFG facilities in 1999. Hatchery spawning activities of captive-reared chinook salmon produced eyed-eggs for outplanting in streamside incubation chambers in the West Fork Yankee Fork Salmon River (N=2,297) and the East Fork Salmon River (N=1,038). Additionally, a number of these eggs were maintained at the Eagle Fish Hatchery to ensure adequate brood year 1999 representation from these systems, and produced 279 and 87 juveniles from the West Fork Yankee Fork and East Fork Salmon River, respectively. Eyed-eggs were not collected from the West Fork Yankee Fork due to low adult escapement. Brood year 1998 juveniles were collected from the Lemhi River (N=191), West Fork Yankee Fork Salmon River (N=229), and East Fork Salmon River (N=185). Additionally, brood year 1999 eyed-eggs were collected from the Lemhi River (N=264) and East Fork Salmon River (N=143). Sixty-two and seven maturing adults were released into Bear Valley Creek (Lemhi River system) and the East Fork Salmon River, respectively, for spawning evaluation in 1999. Nine female carcasses from Bear Valley Creek were examined for egg retention, and of these five were spawned out, one was partially spawned, and three died before depositing eggs. However, much of the spawning related behavior observed involved female chinook salmon paired with male bull trout Salvelinus confluentus. Two female carcasses from the East Fork Salmon River were recovered and examined for egg retention. One of these had spawned and one had not.

During 1999, the Idaho Department of Fish and Game (IDFG) continued developing techniques for the captive rearing of chinook salmon Oncorhynchus tshawytscha. Techniques under development included protocols for rearing juveniles in freshwater and saltwater hatchery environments, and fieldwork to collect brood year 1998 and 1999 juveniles and eggs and to investigate the ability of these fish to spawn naturally. Fish collected as juveniles were held for a short time at the Sawtooth Fish Hatchery and later transferred to the Eagle Fish Hatchery for rearing. Eyed-eggs were transferred immediately to the Eagle Fish Hatchery where they were disinfected and reared by family groups. When fish from either collection method reached approximately 60 mm, they were PIT tagged and reared separately by brood year and source stream. Sixteen different groups were in culture at IDFG facilities in 1999. Hatchery spawning activities of captive-reared chinook salmon produced eyed-eggs for outplanting in streamside incubation chambers in the West Fork Yankee Fork Salmon River (N=2,297) and the East Fork Salmon River (N=1,038). Additionally, a number of these eggs were maintained at the Eagle Fish Hatchery to ensure adequate brood year 1999 representation from these systems, and produced 279 and 87 juveniles from the West Fork Yankee Fork and East Fork Salmon River, respectively. Eyed-eggs were not collected from the West Fork Yankee Fork due to low adult escapement. Brood year 1998 juveniles were collected from the Lemhi River (N=191), West Fork Yankee Fork Salmon River (N=229), and East Fork Salmon River (N=185). Additionally, brood year 1999 eyed-eggs were collected from the Lemhi River (N=264) and East Fork Salmon River (N=143). Sixty-two and seven maturing adults were released into Bear Valley Creek (Lemhi River system) and the East Fork Salmon River, respectively, for spawning evaluation in 1999. Nine female carcasses from Bear Valley Creek were examined for egg retention, and of these five were spawned out, one was partially spawned, and three died before depositing eggs. However, much of the spawning related behavior observed involved female chinook salmon paired with male bull trout Salvelinus confluentus. Two female carcasses from the East Fork Salmon River were recovered and examined for egg retention. One of these had spawned and one had not.

The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery (Snake River stock) yearling fallchinook salmon that were acclimated and released at three FallChinook Acclimation Project sites upstream of Lower Granite Dam along with yearlings released on-station from Lyons Ferry Hatchery in 1998. The three fallchinook acclimation facilities are operated by the Nez Perce Tribe and located at Pittsburg Landing and Captain John Rapids on the Snake River and at Big Canyon Creek on the Clearwater River. Yearlings at the Big Canyon facility consisted of two size classes that are referred to in this report as 9.5 fish per pound (fpp) and 30 fpp. The Big Canyon 9.5 fpp were comparable to the yearlings at Pittsburg Landing, Captain John Rapids and Lyons Ferry Hatchery. A total of 9,942 yearlings were PIT tagged and released at Pittsburg Landing. PIT tagged yearlings had a mean fork length of 159.9 mm and mean condition factor of 1.19. Of the 9,942 PIT tagged fish released, a total of 6,836 unique tags were detected at mainstem Snake and Columbia River dams (Lower Granite, Little Goose, Lower Monumental and McNary). A total of 4,926 9.5 fpp and 2,532 30 fpp yearlings were PIT tagged and released at Big Canyon. PIT tagged 9.5 fpp yearlings had a mean fork length of 156.9 mm and mean condition factor of 1.13. PIT tagged 30 fpp yearlings had a mean fork length of 113.1 mm and mean condition factor of 1.18. Of the 4,926 PIT tagged 9.5 fpp yearlings released, a total of 3,042 unique tags were detected at mainstem Snake and Columbia River dams. Of the 2,532 PIT tagged 30 fpp yearlings released, a total of 1,130 unique tags were detected at mainstem Snake and Columbia River dams. A total of 1,253 yearlings were PIT tagged and released at Captain John Rapids. PIT tagged yearlings had a mean fork length of 147.5 mm and mean condition factor of 1.09. Of the 1,253 PIT tagged fish released, a total of 719 unique tags were detected at mainstem Snake and Columbia River dams. A total of 2,420 yearlings were PIT tagged and released at Lyons Ferry Hatchery. PIT tagged yearlings had a mean fork length of 159.0 mm and mean condition factor of 1.10. Of the 2,420 PIT tagged fish released, a total of 979 unique tags were detected at mainstem Snake and Columbia River dams (Lower Monumental and McNary). Median travel times, based on all detections, of PIT tagged fish released from Pittsburg Landing were 10.5 days to Lower Granite Dam, 21.7 days to McNary Dam and 29.8 days to Bonneville Dam. Median migration rates were 16.4 rkm/d to Lower Granite Dam, 18.3 rkm/d to McNary Dam and 18.9 rkm/d to Bonneville Dam. The median arrival dates were April 25 at Lower Granite Dam, May 6 at McNary Dam and May 14 at Bonneville Dam. The 90% passage dates were May 5 at Lower Granite Dam, May 20 at McNary Dam and May 25 at Bonneville Dam. Median travel times, based on all detections, of PIT tagged 9.5 fpp yearlings released from Big Canyon were 13.3 days to Lower Granite Dam, 26.0 days to McNary Dam and 30.8 days to Bonneville Dam. Median migration rates were 13.0 rkm/d to Lower Granite Dam, 15.3 rkm/d to McNary Dam and 18.3 rkm/d to Bonneville Dam. The median arrival dates were April 27 at Lower Granite Dam, May 11 at McNary Dam and May 15 at Bonneville Dam. The 90% passage dates were May 9 at Lower Granite Dam, May 24 at McNary Dam and May 25 at Bonneville Dam. Median travel times, based on all detections, of PIT tagged 30 fpp yearlings released from Big Canyon were 20.8 days to Lower Granite Dam, 37.6 days to McNary Dam and 43.5 days to Bonneville Dam. Median migration rates were 8.3 rkm/d to Lower Granite Dam, 10.6 rkm/d to McNary Dam and 12.9 rkm/d to Bonneville Dam. The median arrival dates were May 5 at Lower Granite Dam, May 23 at McNary Dam and May 28 at Bonneville Dam. The 90% passage dates were May 22 at Lower Granite Dam, May 31 at McNary Dam and June 5 at Bonneville Dam. Median arrival dates, based on all detections, of PIT tagge

We investigated the spawning patterns of Chinook salmon Oncorhynchus tshawytscha on the lower Cowlitz River, Washington (USA) using a unique set of fine- and coarse-scale 35 temporal and spatial data collected during bi-weekly aerial surveys conducted in 1991-2009 (500 m to 28 km resolution) and 2008-2009 (100-500 m resolution). Redd locations were mapped from a helicopter during 2008 and 2009 with a hand-held global positioning system (GPS) synchronized with in-flight audio recordings. We examined spatial patterns of Chinook salmon redd reoccupation among and within years in relation to segment-scale geomorphic features. Chinook salmon spawned in the same sections each year with little variation among years. On a coarse scale, five years (1993, 1998, 2000, 2002, and 2009) were compared for reoccupation. Redd locations were highly correlated among years resulting in a minimum correlation coefficient of 0.90 (adjusted P = 0.002). Comparisons on a fine scale (500 m) between 2008 and 2009 also revealed a high degree of consistency among redd locations (P < 0.001). On a finer temporal scale, we observed that salmon spawned in the same sections during the first and last week (2008: P < 0.02; and 2009: P < 0.001). Redds were clustered in both 2008 and 2009 (P < 0.001). Regression analysis with a generalized linear model at the 500-m scale indicated that river kilometer and channel bifurcation were positively associated with redd density, whereas sinuosity was negatively associated with redd density. Collecting data on specific redd locations with a GPS during aerial surveys was logistically feasible and cost effective and greatly enhanced the spatial precision of Chinook salmon spawning surveys.

Juvenile chinook, salmon (Oncorhynchus tshawytscha) in the Hanford area of the free-flowing central Columbia River, Washington consume almost entirely adult and larval stages of aquatic insects. The diet is dominated by midges (Diptera: Chironomidae). By numbers, adult midges provided 64 and 58% of the diet and larval midges 17 and 18% of the diet, in 1968 and 1969, respectively. The families Hydropsychidae (Trichoptera), Notonectidae (Hemiptera) and Hypogastruridae (Collembola) are of minor numerical importance with a combined utilization of 7% in 1968 and 15% in 1969. Distinctive features of food and feeding activity of juvenile chinook at Hanford are fourfold: (1) the fish utilize relatively few insect groups, predominantly Chironomidae; (2) they depend largely upon autochthonous river organisms; (3) they visually select living prey drifting, floating or swimming in the water; and (4) they are apparently habitat opportunists to a large extent. Analyses were made of variations in diet and numbers of insects consumed between six sampling stations distributed along a 38 km section of the river. Data are provided on feeding intensity, fish lengths, length-weight relationships, and coefficients of condition. Seasonal changes in river temperature and discharge, as well as variations in regulated flow levels are environmental features influencing feeding, growth, and emigration of fish in the Hanford environs.

The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fallChinook salmon Oncorhynchus tshawytscha that were acclimated and released at three FallChinook Acclimation Project sites upstream of Lower Granite Dam in 2002. This was the seventh year of a long-term project to supplement natural spawning populations of Snake River stock fallChinook salmon upstream of Lower Granite Dam. The 479,358 yearlings released from the FallChinook Acclimation Project facilities exceeded the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 7,545 PIT tagged yearlings from Pittsburg Landing, 7,482 from Big Canyon and 2,487 from Captain John Rapids. Fish health sampling indicated that, overall, bacterial kidney disease levels at the acclimation facilities could be considered medium to high with 43-62% of fish sampled rating medium to very high. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 146.7 mm (146.2-147.2 mm) at Captain John Rapids to 164.8 mm (163.5-166.1 mm) at Lyons Ferry Hatchery. Mean condition factors ranged from 1.06 at Lyons Ferry Hatchery to 1.14 at Pittsburg Landing and Captain John Rapids. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 88.6% (86.0-91.1%) for Pittsburg Landing to 97.0% (92.4-101.7%) for Captain John Rapids. Estimated survival from release to McNary Dam ranged from 54.3% (50.2-58.3%) for Big Canyon to 70.5% (65.4-75.5%) for Pittsburg Landing. Median migration rates to Lower Granite Dam, based on all observations of PIT tagged yearlings from the FCAP facilities, ranged from 8.1 river kilometers per day (rkm/d) for Captain John Rapids to 14.1 rkm/d for Pittsburg Landing. Median migration rates to McNary Dam ranged from 10.9 rkm/d for Big Canyon to 15.9 rkm/d for Pittsburg Landing. Median travel times from the FCAP facilities were about 9-12 days to Lower Granite Dam and 25-30 days to McNary Dam. Median arrival dates at Lower Granite Dam, based on all observations of PIT tagged yearling groups from the FCAP facilities, ranged from April 20-28. Median arrival dates at McNary Dam for the FCAP groups were all May 11. The objectives of this project are to quantify and evaluate pre-release fish health, condition and mark retention as well as post-release survival, migration timing, migration rates, travel times and movement patterns of fallChinook salmon from supplementation releases at the FCAP facilities, then provide feedback to co-managers for project specific and basin wide management decision-making.

Smolt outmigration was monitored at Wapatox on the Naches River and Prosser on the lower Yakima. The spring outmigration at Wapatox was estimated to be smolts. The survival from egg to smolt was calculated using the 1986 redd counts and the 1988 smolt outmigration at Prosser. The smolt to adult survival was calculated based on the 1983 smolt outmigration estimated at Prosser and the 1984 return of jacks (3 year old fish), the 1985 return of four year old adults, and the 1986 return of five year old fish to the Yakima River. 13 refs., 4 figs., 47 tabs.

turbines that generate up to 270 MW of power. This is a gravity dam constructed in 1958. It is 489 m longCase Study Continuous Monitoring of an Ice Sheet in a Reservoir Upstream of Beaumont Dam, Canada: The geomatics engineering contributions to continuous three-dimensional monitoring of ice sheet in a dam

This report provides results from an ongoing project to monitor the migration behavior and survival of wild juvenile spring/summer Chinook salmon in the Snake River Basin. Data reported is from detections of PIT tagged fish during late summer 2007 through mid-2008. Fish were tagged in summer 2007 by the National Marine Fisheries Service (NMFS) in Idaho and by the Oregon Department of Fish and Wildlife (ODFW) in Oregon. Our analyses include migration behavior and estimated survival of fish at instream PIT-tag monitors and arrival timing and estimated survival to Lower Granite Dam. Principal results from tagging and interrogation during 2007-2008 are: (1) In July and August 2007, we PIT tagged and released 7,390 wild Chinook salmon parr in 12 Idaho streams or sample areas. (2) Overall observed mortality from collection, handling, tagging, and after a 24-hour holding period was 1.4%. (3) Of the 2,524 Chinook salmon parr PIT tagged and released in Valley Creek in summer 2007, 218 (8.6%) were detected at two instream PIT-tag monitoring systems in lower Valley Creek from late summer 2007 to the following spring 2008. Of these, 71.6% were detected in late summer/fall, 11.9% in winter, and 16.5% in spring. Estimated parr-to-smolt survival to Lower Granite Dam was 15.5% for the late summer/fall group, 48.0% for the winter group, and 58.5% for the spring group. Based on detections at downstream dams, the overall efficiency of VC1 (upper) or VC2 (lower) Valley Creek monitors for detecting these fish was 21.1%. Using this VC1 or VC2 efficiency, an estimated 40.8% of all summer-tagged parr survived to move out of Valley Creek, and their estimated survival from that point to Lower Granite Dam was 26.5%. Overall estimated parr-to-smolt survival for all summer-tagged parr from this stream at the dam was 12.1%. Development and improvement of instream PIT-tag monitoring systems continued throughout 2007 and 2008. (4) Testing of PIT-tag antennas in lower Big Creek during 2007-2008 showed these antennas (and anchoring method) are not adequate to withstand high spring flows in this drainage. Future plans involve removing these antennas before high spring flows. (5) At Little Goose Dam in 2008, length and/or weight were taken on 505 recaptured fish from 12 Idaho stream populations. Fish had grown an average of 40.1 mm in length and 10.6 g in weight over an average of 288 d. Their mean condition factor declined from 1.25 at release (parr) to 1.05 at recapture (smolt). (6) Mean release lengths for detected fish were significantly larger than for fish not detected the following spring and summer (P < 0.0001). (7) Fish that migrated through Lower Granite Dam in April and May were significantly larger at release than fish that migrated after May (P < 0.0001) (only 12 fish migrated after May). (8) In 2008, peak detections at Lower Granite Dam of parr tagged during summer 2007 (from the 12 stream populations in Idaho and 4 streams in Oregon) occurred during moderate flows of 87.5 kcfs on 7 May and high flows of 197.3 kcfs on 20 May. The 10th, 50th, and 90th percentile passage occurred on 30 April, 11 May, and 23 May, respectively. (9) In 2007-2008, estimated parr-to-smolt survival to Lower Granite Dam for Idaho and Oregon streams (combined) averaged 19.4% (range 6.2-38.4% depending on stream of origin). In Idaho streams the estimated parr-to-smolt survival averaged 21.0%. This survival was the second highest since 1993 for Idaho streams. Relative parr densities were lower in 2007 (2.4 parr/100 m2) than in all previous years since 2000. In 2008, we observed low-to-moderate flows prior to mid-May and relatively cold weather conditions throughout the spring migration season. These conditions moved half of the fish through Lower Granite Dam prior to mid-May; then high flows moved 50 to 90% of the fish through the dam in only 12 days. Clearly, complex interrelationships of several factors drive the annual migrational timing of the stocks.

The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fallChinook salmon Oncorhynchus tshawytscha that were acclimated and released at three FallChinook Acclimation Project (FCAP) sites upstream of Lower Granite Dam along with yearlings released on-station from Lyons Ferry Hatchery in 1999. This was the fourth year of a long-term project to supplement natural spawning populations of Snake River stock fallChinook salmon upstream of Lower Granite Dam. The 453,117 yearlings released from the FallChinook Acclimation Project facilities not only slightly exceeded the 450,000 fish quota, but a second release of 76,386 yearlings (hereafter called Surplus) were acclimated at the Big Canyon facility and released about two weeks after the primary releases. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 9,941 PIT tagged yearlings from Pittsburg Landing, 9,583 from Big Canyon, 2,511 Big Canyon Surplus and 2,494 from Captain John Rapids. The Washington Department of Fish and Wildlife released 983 PIT tagged yearlings from Lyons Ferry Hatchery. Fish health sampling indicated that, overall, bacterial kidney disease levels could be considered relatively low and did not appear to increase after transport to the acclimation facilities. Compared to prior years, Quantitative Health Assessment Indices were relatively low at Pittsburg Landing and Lyons Ferry Hatchery and relatively high at Big Canyon and Captain John Rapids. Mean fork lengths (95% confidence interval) of the release groups ranged from 147.4 mm (146.7-148.1 mm) at Captain John Rapids to 163.7 mm (163.3-164.1 mm) at Pittsburg Landing. Mean condition factors ranged from 1.04 at Pittsburg Landing to 1.23 at Captain John Rapids. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 87.8% (82.1-93.4%) for Big Canyon Surplus to 94.1% (90.1-98.1%) for Captain John Rapids. Estimated survival from release to McNary Dam ranged from 58.7% (49.3-68.1%) for Big Canyon Surplus to 71.3% (60.1-82.5%) for Captain John Rapids. Median migration rates to Lower Granite Dam, based on all observations of PIT tagged yearlings from the FCAP facilities, ranged from 9.3 river kilometers per day (rkm/d) for Captain John Rapids to 18.7 rkm/d for Pittsburg Landing. Median migration rates to McNary Dam ranged from 9.0 rkm/d for Lyons Ferry Hatchery to 17.3 rkm/d for Pittsburg Landing. Median travel times from the FCAP facilities were about 7-10 days to Lower Granite Dam and 21-23 days to McNary Dam. Median arrival dates at Lower Granite Dam, based on all observations of PIT tagged yearling groups from the FCAP facilities, were all from April 23-25. The median arrival date for Big Canyon Surplus was May 4. Median arrival dates at McNary Dam for Pittsburg Landing, Big Canyon and Captain John Rapids groups were all from May 7-8. Median arrival dates at McNary Dam were May 17 for Big Canyon Surplus and April 26 for Lyons Ferry Hatchery.

The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fallChinook salmon Oncorhynchus tshawytscha that were acclimated and released at three FallChinook Acclimation Project sites upstream of Lower Granite Dam along with yearlings released on-station from Lyons Ferry Hatchery in 2000. This was the fifth year of a long-term project to supplement natural spawning populations of Snake River stock fallChinook salmon upstream of Lower Granite Dam. The 397,339 yearlings released from the FallChinook Acclimation Project facilities were short of the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 7,477 PIT tagged yearlings from Pittsburg Landing, 7,421 from Big Canyon and 2,488 from Captain John Rapids. The Washington Department of Fish and Wildlife released 980 PIT tagged yearlings from Lyons Ferry Hatchery. Fish health sampling indicated that, overall, bacterial kidney disease levels could be considered relatively low. Compared to prior years, Quantitative Health Assessment Indices were relatively low at Big Canyon and Captain John Rapids and about average at Pittsburg Landing and Lyons Ferry Hatchery. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 157.7 mm (157.3-158.1 mm) at Big Canyon to 172.9 mm (172.2-173.6 mm) at Captain John Rapids. Mean condition factors ranged from 1.06 at Captain John Rapids and Lyons Ferry Hatchery to 1.12 at Big Canyon. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 87.0% (84.7-89.4%) for Pittsburg Landing to 95.2% (91.5-98.9%) for Captain John Rapids. Estimated survival from release to McNary Dam ranged from 65.8% (58.5-73.1%) for Lyons Ferry Hatchery to 84.0% (76.2-91.8%) for Captain John Rapids. Median migration rates to Lower Granite Dam, based on all observations of PIT tagged yearlings from the FCAP facilities, ranged from 10.1 river kilometers per day (rkm/d) for Captain John Rapids to 19.1 rkm/d for Pittsburg Landing. Median migration rates to McNary Dam ranged from 6.0 rkm/d for Lyons Ferry Hatchery to 17.3 rkm/d for Pittsburg Landing. Median travel times from the FCAP facilities were about 9-10 days to Lower Granite Dam and 22-25 days to McNary Dam. Median arrival dates at Lower Granite Dam, based on all observations of PIT tagged yearling groups from Pittsburg Landing, Big Canyon and Captain John Rapids, were all from April 21-22. Median arrival dates at McNary Dam for Pittsburg Landing, Big Canyon and Captain John Rapids groups were all from May 5-6. The median arrival date at McNary Dam was April 24 for Lyons Ferry Hatchery yearlings.

The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fallChinook salmon Oncorhynchus tshawytscha that were acclimated and released at three FallChinook Acclimation Project sites upstream of Lower Granite Dam along with yearlings released on-station from Lyons Ferry Hatchery in 2001. This was the sixth year of a long-term project to supplement natural spawning populations of Snake River stock fallChinook salmon upstream of Lower Granite Dam. The 318,932 yearlings released from the FallChinook Acclimation Project facilities were short of the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 7,503 PIT tagged yearlings from Pittsburg Landing, 7,499 from Big Canyon and 2,518 from Captain John Rapids. The Washington Department of Fish and Wildlife released 991 PIT tagged yearlings from Lyons Ferry Hatchery. Fish health sampling indicated that, overall, bacterial kidney disease levels could be considered relatively low. Compared to prior years, Quantitative Health Assessment Indices were relatively low at Big Canyon and Captain John Rapids and about average at Pittsburg Landing and Lyons Ferry Hatchery. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 155.4 mm (154.7-156.1 mm) at Captain John Rapids to 171.6 mm (170.7-172.5 mm) at Lyons Ferry Hatchery. Mean condition factors ranged from 1.02 at Lyons Ferry Hatchery to 1.16 at Big Canyon and Captain John Rapids. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 74.4% (73.2-75.5%) for Big Canyon to 85.2% (83.5-87.0%) for Captain John Rapids. Estimated survival from release to McNary Dam ranged from 37.9% (36.0-40.0%) for Pittsburg Landing to 57.9% (53.0-62.8%) for Lyons Ferry Hatchery. Median migration rates to Lower Granite Dam, based on all observations of PIT tagged yearlings from the FCAP facilities, ranged from 6.3 river kilometers per day (rkm/d) for Big Canyon to 10.8 rkm/d for Pittsburg Landing. Median migration rates to McNary Dam ranged from 5.2 rkm/d for Lyons Ferry Hatchery to 10.9 rkm/d for Pittsburg Landing. Median travel times from the FCAP facilities were about 13-17 days to Lower Granite Dam and 31-37 days to McNary Dam. Median arrival dates at Lower Granite Dam, based on all observations of PIT tagged yearling groups from Pittsburg Landing, Big Canyon and Captain John Rapids, were all from April 26-27. Median arrival dates at McNary Dam for Pittsburg Landing, Big Canyon and Captain John Rapids groups were all from May 14-18. The median arrival date at McNary Dam was May 13 for Lyons Ferry Hatchery yearlings.

The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fallChinook salmon Oncorhynchus tshawytscha that were acclimated and released at three FallChinook Acclimation Project (FCAP) sites upstream of Lower Granite Dam in 2004. This was the ninth year of a long-term project to supplement natural spawning populations of Snake River stock fallChinook salmon upstream of Lower Granite Dam. The 414,452 yearlings released from the FallChinook Acclimation Project facilities were short of the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 4,983 PIT tagged yearlings from Pittsburg Landing, 4,984 from Big Canyon and 4,982 from Captain John Rapids. Fish health sampling indicated that, overall, bacterial kidney disease levels could be considered low with 53-94% rating not detected to low. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 154.6 mm (154.0-155.2 mm) at Pittsburg Landing to 163.0 mm (162.6-163.4 mm) at Captain John Rapids. Mean condition factors ranged from 1.06 at Lyons Ferry Hatchery to 1.16 at Big Canyon. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 74.7% (72.9-76.5%) for Big Canyon to 88.1% (85.7-90.6%) for Captain John Rapids. Estimated survival from release to McNary Dam ranged from 45.3% (39.2-51.5%) for Pittsburg Landing to 52.1% (42.9-61.2%) for Big Canyon. Median migration rates to Lower Granite Dam, based on all observations of PIT tagged yearlings from the FCAP facilities, ranged from 5.5 river kilometers per day (rkm/d) for Captain John Rapids to 12.8 rkm/d for Pittsburg Landing. Median migration rates to McNary Dam ranged from 10.9 rkm/d for Captain John Rapids to 17.6 rkm/d for Pittsburg Landing. Median travel times from the FCAP facilities were about 13-16 days to Lower Granite Dam and 23-29 days to McNary Dam. Median arrival dates at Lower Granite Dam, based on all observations of PIT tagged yearling groups from Pittsburg Landing, Big Canyon and Captain John Rapids, ranged from April 18-29. Median arrival dates at McNary Dam for Pittsburg Landing, Big Canyon and Captain John Rapids groups ranged from May 1-8.

The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fallChinook salmon Oncorhynchus tshawytscha that were acclimated and released at three FallChinook Acclimation Project (FCAP) sites upstream of Lower Granite Dam in 2003. This was the eighth year of a long-term project to supplement natural spawning populations of Snake River stock fallChinook salmon upstream of Lower Granite Dam. The 437,633 yearlings released from the FallChinook Acclimation Project facilities were short of the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 7,492 PIT tagged yearlings from Pittsburg Landing, 7,494 from Big Canyon and 2,497 from Captain John Rapids. Fish health sampling indicated that, overall, bacterial kidney disease levels at the acclimation facilities could be considered medium with 37-83% of the fish sampled rating medium to very high. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 153.7 mm (153.2-154.2 mm) at Captain John Rapids to 164.2 mm (163.9-164.5 mm) at Pittsburg Landing. Mean condition factors ranged from 1.06 at Lyons Ferry Hatchery to 1.22 at Captain John Rapids. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 83.1% (80.7-85.5%) for Big Canyon to 91.7% (87.7-95.7%) for Captain John Rapids. Estimated survival from release to McNary Dam ranged from 59.9% (54.6-65.2%) for Big Canyon to 69.4% (60.5-78.4%) for Captain John Rapids. Median migration rates to Lower Granite Dam, based on all observations of PIT tagged yearlings from the FCAP facilities, ranged from 5.8 river kilometers per day (rkm/d) for Captain John Rapids to 16.2 rkm/d for Pittsburg Landing. Median migration rates to McNary Dam ranged from 11.7 rkm/d for Captain John Rapids to 17.6 rkm/d for Pittsburg Landing. Median travel times from the FCAP facilities were about 8-15 days to Lower Granite Dam and 22-27 days to McNary Dam. Median arrival dates at Lower Granite Dam, based on all observations of PIT tagged yearling groups from the FCAP facilities, ranged from April 23-25. Median arrival dates at McNary Dam for Pittsburg Landing, Big Canyon and Captain John Rapids groups ranged from May 4-10.

Studies were conducted to describe current habitat conditions in the White River basin above White RiverFalls and to evaluate the potential to produce anadromous fish. An inventory of spawning and rearing habitats, irrigation diversions, and enhancement opportunities for anadromous fish in the White River drainage was conducted. Survival of juvenile fish at White RiverFalls was estimated by releasing juvenile chinook and steelhead above the falls during high and low flow periods and recapturing them below the falls in 1983 and 1984. Four alternatives to provide upstream passage for adult salmon and steelhead were developed to a predesign level. The cost of adult passage and the estimated run size of anadromous fish were used to determine the benefit/cost ratio of the preferred alternative. Possible effects of the introduction of anadromous fish on resident fish and on nearby Oak Springs Hatchery were evaluated. This included an inventory of resident species, a genetic study of native rainbow, and the identification of fish diseases in the basin. 28 figs., 23 tabs.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

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A pilot study was conducted to estimate survival of hatchery-reared yearling chinook salmon through dams and reservoirs on the Snake River. The goals of the study were to: (1) field test and evaluate the Single-Release, Modified-Single-Release, and Paired-Release Models for the estimation of survival probabilities through sections of a river and hydroelectric projects; (2) identify operational and logistical constraints to the execution of these models; and (3) determine the usefulness of the models in providing estimates of survival probabilities. Field testing indicated that the numbers of hatchery-reared yearling chinook salmon needed for accurate survival estimates could be collected at different areas with available gear and methods. For the primary evaluation, seven replicates of 830 to 1,442 hatchery-reared yearling chinook salmon were purse-seined from Lower Granite Reservoir, PIT tagged, and released near Nisqually John boat landing (River Kilometer 726). Secondary releases of PIT-tagged smolts were made at Lower Granite Dam to estimate survival of fish passing through turbines and after detection in the bypass system. Similar secondary releases were made at Little Goose Dam, but with additional releases through the spillway. Based on the success of the 1993 pilot study, the authors believe that the Single-Release and Paired-Release Models will provide accurate estimates of juvenile salmonid passage survival for individual river sections, reservoirs, and hydroelectric projects in the Columbia and Snake Rivers.

For the fourth consecutive year, the Nez Perce Tribe, in conjunction with the Fish Passage Center, participated in the smolt monitoring program in the Imnaha River. A screw trap was used to collect emigrating natural and hatchery chinook salmon (Uncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) smolts from February 25 to June 27, 1997. A total of 270 natural chinook salmon, 10,616 hatchery chinook salmon, 864 natural steelhead trout (and 13 natural steelhead parr), and 7,345 hatchery steelhead trout smolts were captured during emigration studies on the Imnaha River. Mortality associated with trapping, handling and tagging was low: 0.37% for natural chinook, 0.11% for hatchery chinook, 0.11% for natural steelhead, and 0.39% for hatchery steelhead trout smolts. Natural chinook salmon smolts emigrated from the Imnaha River from February 25 to June 10 and had a mean length of 108 mm, average weight of 13 g, and mean condition factor of 1.02. The peak period of natural chinook smolt emigration, based on number of fish collected, occurred between March 25 and April 30. Hatchery reared chinook salmon smolts were collected from April 9 to May 9, with 99% of the smolts being caught within 10 days after release. Hatchery chinook smolts mean length, weight, and condition factor were 131 mm, 25.4 g, and 1.12, respectively. Emigration of natural steelhead smolts in the Imnaha River occurred between March 14 and June 25. Peak emigration occurred from May 1 to May 15. Natural steelhead smolts averaged 175 mm in fork length, 55.8 g in weight and had a mean condition factor of 1 .OO. Hatchery steelhead smolts emigrated from the Imnaha River between April 15 and June 27. Hatchery steelhead smolts averaged 210 mm in fork length, 88 g in weight and had a mean condition factor of 0.93. Spring runoff water conditions in 1997 provided above average flows for emigrating anadromous salmonid smolts. Imnaha River mean daily discharge during spring emigration ranged from 7.4 cms (260 cfs) on March 9 to 96.6 cms (3,410 cfs) on April 20 at USGS gauge 13292000, Imnaha, OR. Snake River discharge measured at the Anatone gauge station, ranged from 61.1 to 152 kcfs from April 15 to May 18. River discharge at LGR ranged from 79.6 kcfs on March 6 to 225.3 kcfs on May 18. Flows at LGR were generally greater than 100 kcfs during most of the spring runoff period, and discharge exceeded 120 kcfs from March 20-31 and April 19 to June 24. The water spill period at LGR occurred continuously from April 10 to June 29 with peak spill of 101.9 kcfs occurring on May 17.

The objectives are: (1) Estimate number and distribution of spring Chinook salmon Oncorhynchus tshawytscha redds and spawners in the John Day River subbasin; and (2) Estimate smolt-to-adult survival rates (SAR) and out-migrant abundance for spring Chinook and summer steelhead O. mykiss and life history characteristics of summer steelhead. Spawning ground surveys for spring (stream-type) Chinook salmon were conducted in four main spawning areas (Mainstem, Middle Fork, North Fork, and Granite Creek System) and seven minor spawning areas (South Fork, Camas Creek, Desolation Creek, Trail Creek, Deardorff Creek, Clear Creek, and Big Creek) in the John Day River basin during August and September of 2005. Census surveys included 298.2 river kilometers (88.2 rkm within index, 192.4 rkm additional within census, and 17.6 rkm within random survey areas) of spawning habitat. We observed 902 redds and 701 carcasses including 227 redds in the Mainstem, 178 redds in the Middle Fork, 420 redds in the North Fork, 62 redds in the Granite Creek System, and 15 redds in Desolation Creek. Age composition of carcasses sampled for the entire basin was 1.6% age 3, 91.2% age 4, and 7.1% age 5. The sex ratio was 57.4% female and 42.6% male. Significantly more females than males were observed in the Granite Creek System. During 2005, 82.3% of female carcasses sampled had released all of their eggs. Significantly more pre-spawn mortalities were observed in Granite Creek. Nine (1.3%) of 701 carcasses were of hatchery origin. Of 298 carcasses examined, 4.0% were positive for the presence of lesions. A significantly higher incidence of gill lesions was found in the Granite Creek System when compared to the rest of the basin. Of 114 kidney samples tested, two (1.8%) had clinical BKD levels. Both infected fish were age-4 females in the Middle Fork. All samples tested for IHNV were negative. To estimate spring Chinook and summer steelhead smolt-to-adult survival (SAR) we PIT tagged 5,138 juvenile Chinook and 4,913 steelhead during the spring of 2005. We estimated that 130,144 (95% CL's 97,133-168,409) Chinook emigrated from the upper John Day subbasin past our seining area in the Mainstem John Day River (river kilometers 274-296) between February 4 and June 16, 2005. We also estimated that 32,601 (95% CL's 29,651 and 36,264) Chinook and 47,921 (95% CL's 35,025 and 67,366) steelhead migrated past our Mainstem rotary screw trap at river kilometer (rkm) 326 between October 4, 2004 and July 6, 2005. We estimated that 20,193 (95% CL's 17,699 and 22,983) Chinook and 28,980 (95% CL's 19,914 and 43,705) steelhead migrated past our Middle Fork trap (rkm 24) between October 6, 2004 and June 17, 2005. Seventy three percent of PIT tagged steelhead migrants were age-2 fish, 13.8% were age-3, 12.7% were age-2, and 0.3% were age 4. Spring Chinook SAR for the 2002 brood year was estimated at 2.5% (100 returns of 4,000 PIT tagged smolts). Preliminary steelhead SAR (excluding 2-ocean fish) for the 2004 tagging year was estimated at 1.61% (60 returns of 3,732 PIT-tagged migrants).

There has been much debate recently among fisheries professionals over the data and functional relationships used by Sims and Ossiander to describe the effects of flow in the Snake River on the survival and travel time of chinook salmon and steelhead smolts. The relationships were based on mark and recovery experiments conducted at various Snake and Columbia River sites between 1964 and 1979 to evaluate the effects of dams and flow regulation on the migratory characteristic`s chinook sa mon and steelhead trout smolts. The reliability of this information is crucial because it forms the logical basis for many of the flow management options being considered today to protect,upriver populations of chinook salmon and steelhead trout. In this paper I evaluate the primary data, assumptions, and calculations that underlie the flow-survival relationship derived by Sims and Ossiander (1981) for chinook salmon smolts.

From January to July of 2003, 42 entrapments and 25 stranding sites were examined on the Columbia River near Ives Island, downstream of Bonneville Dam. A total of 6,122 salmonids, consisting of three different species, were collected at these sites (Table 1). The fish sampled during this time were chinook salmon (69%), chum salmon (7%), and coho salmon (24%). The following analysis of the relationship between environmental factors and salmon placed at risk by river level fluctuations focuses on each of these three salmon species.

From January to July of 2004, 33 entrapments and 56 stranding sites were examined on the Columbia River near Ives Island, downstream of Bonneville Dam. A total of 7,834 salmonids, made up of three species, were collected (Table 1). The fish sampled during this time were chinook salmon (85%), chum salmon (8%), and coho salmon (7%). The following analysis of the relationship between environmental factors and salmon placed at risk by river level fluctuations focuses on each of these three species of salmon.

From January to July of 2002, 79 entrapments and 22 stranding sites were examined on the Columbia River near Ives Island, downstream of Bonneville Dam. A total of 2,272 salmonids, consisting of three different species, were collected at these sites (Table 1). The fish sampled during this time were chinook salmon (49%), chum salmon (29%), and coho salmon (22%). The following analysis of the relationship between environmental factors and salmon placed at risk by river level fluctuations focuses on each of these three salmon species.

During 2000, the Idaho Department of Fish and Game (IDFG) continued to develop techniques to rear chinook salmon Oncorhynchus tshawytscha to sexual maturity in captivity and to monitor their reproductive performance under natural conditions. Eyed-eggs were collected to establish captive cohorts from three study streams and included 503 eyed-eggs from East Fork Salmon River (EFSR), 250 from the Yankee Fork Salmon River, and 304 from the West Fork Yankee Fork Salmon River (WFYF). After collection, the eyed-eggs were immediately transferred to the Eagle Fish Hatchery, where they were incubated and reared by family group. Juveniles collected the previous summer were PIT and elastomer tagged and vaccinated against vibrio Vibrio spp. and bacterial kidney disease before the majority (approximately 75%) were transferred to the National Marine Fisheries Service, Manchester Marine Experimental Station for saltwater rearing through sexual maturity. Smolt transfers included 158 individuals from the Lemhi River (LEM), 193 from the WFYF, and 372 from the EFSR. Maturing fish transfers from the Manchester facility to the Eagle Fish Hatchery included 77 individuals from the LEM, 45 from the WFYF, and 11 from the EFSR. Two mature females from the WFYF were spawned in captivity with four males in 2000. Only one of the females produced viable eggs (N = 1,266), which were placed in in-stream incubators by personnel from the Shoshone-Bannock Tribe. Mature adults (N = 70) from the Lemhi River were released into Big Springs Creek to evaluate their reproductive performance. After release, fish distributed themselves throughout the study section and displayed a progression of habitat associations and behavior consistent with progressing maturation and the onset of spawning. Fifteen of the 17 suspected redds spawned by captive-reared parents in Big Springs Creek were hydraulically sampled to assess survival to the eyed stage of development. Eyed-eggs were collected from 13 of these, and survival ranged from 0% to 96%, although there was evidence that some eggs had died after reaching the eyed stage. Six redds were capped in an attempt to document fry emergence, but none were collected. A final hydraulic sampling of the capped redds yielded nothing from five of the six, but 75 dead eggs and one dead fry were found in the sixth. Smothering by fine sediment is the suspected cause of the observed mortality between the eyed stage and fry emergence.

This reports on the second, third, and fourth years of a multi-year study to assess smolt migration characteristics and cumulative detection rates of naturally produced spring chinook salmon (Oncorhynchus tshawytscha) from Northeast Oregon streams. The goal of this project is to develop an understanding of interpopulational and interannual variation in several early life history parameters of naturally produced spring and summer chinook salmon in the Grande Ronde and Imnaha River subbasins. This project will provide information to assist chinook salmon population recovery efforts. Specific populations included in the study are: (1) Catherine Creek; (2) Upper Grande Ronde River; (3) Lostine River; (4) Imnaha River; (5) Wenaha River; and (6) Minam River. In this document, the authors present findings and activities from research completed in 1993, 1994, and 1995.

During 2001, the Idaho Department of Fish and Game continued to develop techniques to rear chinook salmon Oncorhynchus tshawytscha to sexual maturity in captivity and to monitor their reproductive performance under natural conditions. Eyed-eggs were hydraulically collected from redds in the East Fork Salmon River (EFSR; N = 311) and the West Fork Yankee Fork Salmon River (WFYF; N = 272) to establish brood year 2001 culture cohorts. The eyed-eggs were incubated and reared by family group at the Eagle Fish Hatchery (Eagle). Juveniles collected the previous summer were PIT and elastomer tagged and vaccinated against vibrio Vibrio spp. and bacterial kidney disease prior to the majority of them being transferred to the National Marine Fisheries Service, Manchester Marine Experimental Station for saltwater rearing through maturity. Smolt transfers included 210 individuals from the Lemhi River (LEM), 242 from the WFYF, and 178 from the EFSR. Maturing fish transfers from Manchester to Eagle included 62 individuals from the LEM, 72 from the WFYF, and 27 from the EFSR. Additional water chilling capacity was added at Eagle in 2001 to test if spawn timing could be advanced by temperature manipulations, and adults from the LEM and WFYF were divided into chilled ({approx} 9 C) and ambient ({approx} 13.5 C) water temperature groups while at Eagle. Twenty-five mature females from the LEM (11 chilled, 14 ambient) were spawned in captivity with 23 males with the same temperature history in 2001. Water temperature group was not shown to affect the spawn timing of these females, but males did mature earlier. Egg survival to the eyed stage of development averaged 37.9% and did not differ significantly between the two temperature groups. A total of 8,154 eyed-eggs from these crosses were placed in in-stream incubators by personnel from the Shoshone-Bannock Tribe. Mature adults (N = 89) were released into the WFYF to evaluate their reproductive performance. After release, fish distributed themselves throughout the study section and displayed a progression of habitat associations and behavior consistent with progressing maturation and the onset of spawning. Five of the 18 redds spawned by captive-reared parents were hydraulically sampled to assess survival to the eyed stage of development. Eyed-eggs were collected from four of these, and survival to this stage ranged from 0%-89%. Expanding these results to the remaining redds produced an estimate of 15,000 eyed-eggs being produced by captive-reared fish.

This report provides results from an ongoing project to monitor the migration behavior and survival of wild juvenile spring/summer Chinook salmon in the Snake River Basin. Data reported is from detections of PIT tagged fish during late summer 2007 through mid-2008. Fish were tagged in summer 2007 by the National Marine Fisheries Service (NMFS) in Idaho and by the Oregon Department of Fish and Wildlife (ODFW) in Oregon. Our analyses include migration behavior and estimated survival of fish at instream PIT-tag monitors and arrival timing and estimated survival to Lower Granite Dam. Principal results from tagging and interrogation during 2007-2008 are listed below: (1) In July and August 2007, we PIT tagged and released 7,390 wild Chinook salmon parr in 12 Idaho streams or sample areas. (2) Overall observed mortality from collection, handling, tagging, and after a 24-hour holding period was 1.4%. (3) Of the 2,524 Chinook salmon parr PIT tagged and released in Valley Creek in summer 2007, 218 (8.6%) were detected at two instream PIT-tag monitoring systems in lower Valley Creek from late summer 2007 to the following spring 2008. Of these, 71.6% were detected in late summer/fall, 11.9% in winter, and 16.5% in spring. Estimated parr-to-smolt survival to Lower Granite Dam was 15.5% for the late summer/fall group, 48.0% for the winter group, and 58.5% for the spring group. Based on detections at downstream dams, the overall efficiency of VC1 (upper) or VC2 (lower) Valley Creek monitors for detecting these fish was 21.1%. Using this VC1 or VC2 efficiency, an estimated 40.8% of all summer-tagged parr survived to move out of Valley Creek, and their estimated survival from that point to Lower Granite Dam was 26.5%. Overall estimated parr-to-smolt survival for all summer-tagged parr from this stream at the dam was 12.1%. Development and improvement of instream PIT-tag monitoring systems continued throughout 2007 and 2008. (4) Testing of PIT-tag antennas in lower Big Creek during 2007-2008 showed these antennas (and anchoring method) are not adequate to withstand high spring flows in this drainage. Future plans involve removing these antennas before high spring flows. (5) At Little Goose Dam in 2008, length and/or weight were taken on 505 recaptured fish from 12 Idaho stream populations. Fish had grown an average of 40.1 mm in length and 10.6 g in weight over an average of 288 d. Their mean condition factor declined from 1.25 at release (parr) to 1.05 at recapture (smolt). (6) Mean release lengths for detected fish were significantly larger than for fish not detected the following spring and summer (P < 0.0001). (7) Fish that migrated through Lower Granite Dam in April and May were significantly larger at release than fish that migrated after May (P < 0.0001) (only 12 fish migrated after May). (8) In 2008, peak detections at Lower Granite Dam of parr tagged during summer 2007 (from the 12 stream populations in Idaho and 4 streams in Oregon) occurred during moderate flows of 87.5 kcfs on 7 May and high flows of 197.3 kcfs on 20 May. The 10th, 50th, and 90th percentile passage occurred on 30 April, 11 May, and 23 May, respectively. (9) In 2007-2008, estimated parr-to-smolt survival to Lower Granite Dam for Idaho and Oregon streams (combined) averaged 19.4% (range 6.2-38.4% depending on stream of origin). In Idaho streams the estimated parr-to-smolt survival averaged 21.0%. This survival was the second highest since 1993 for Idaho streams. Relative parr densities were lower in 2007 (2.4 parr/100 m{sup 2}) than in all previous years since 2000. In 2008, we observed low-to-moderate flows prior to mid-May and relatively cold weather conditions throughout the spring migration season. These conditions moved half of the fish through Lower Granite Dam prior to mid-May; then high flows moved 50 to 90% of the fish through the dam in only 12 days. Clearly, complex interrelationships of several factors drive the annual migrational timing of the stocks.

The John Day River subbasin supports one of the last remaining intact wild populations of spring Chinook salmon and summer steelhead in the Columbia River Basin. These populations remain depressed relative to historic levels and limited information is available for steelhead life history. Numerous habitat protection and rehabilitation projects have been implemented in the basin to improve salmonid freshwater production and survival. However, these projects often lack effectiveness monitoring. While our monitoring efforts outlined here will not specifically measure the effectiveness of any particular project, they will provide much needed programmatic or watershed (status and trend) information to help evaluate project-specific effectiveness monitoring efforts as well as meet some data needs as index stocks. Our continued monitoring efforts to estimate salmonid smolt abundance, age structure, SAR, smolts/redd, freshwater habitat use, and distribution of critical life states will enable managers to assess the long-term effectiveness of habitat projects and to differentiate freshwater and ocean survival. Because Columbia Basin managers have identified the John Day subbasin spring Chinook population as an index population for assessing the effects of alternative future management actions on salmon stocks in the Columbia Basin (Schaller et al. 1999) we continue our ongoing studies. This project is high priority based on the level of emphasis by the NWPPC Fish and Wildlife Program, Independent Scientific Advisory Board (ISAB), Independent Scientific Review Panel (ISRP), NOAA National Marine Fisheries Service (NMFS), and the Oregon Plan for Salmon and Watersheds (OWEB). Each of these groups have placed priority on monitoring and evaluation to provide the real-time data to guide restoration and adaptive management in the region. The objective is to estimate smolt-to-adult survival rates (SAR) and out-migrant abundance for spring Chinook Oncorhynchus tshawytscha and summer steelhead O. mykiss and life history characteristics of summer steelhead.

Ecosystem Diagnosis and Treatment (EDT) methodology was applied to the analysis of chinook salmon in the mid-Columbia subbasins which flow through the steppe and steppe-shrub vegetation zones. The EDT examines historical changes in life history diversity related to changes in habitat. The emphasis on life history, habitat and historical context is consistent with and ecosystem perspective. This study is based on the working hypothesis that the decline in chinook salmon was at least in part due to a loss of biodiversity defined as the intrapopulation life history diversity. The mid Columbia subbasins included in the study are the Deschutes, John Day, Umatilla, Tucannon and Yakima.

Program RealTime provided tracking and forecasting of the 1999 inseason outmigration via the internet for stocks of wild PIT-tagged spring/summer chinook salmon. These stocks were ESUs from sixteen release sites above Lower Granite dam, including Bear Valley Creek, Big Creek, Cape Horn Creek, Catherine Creek, Elk Creek, Herd Creek, Imnaha River, Lake Creek, Loon Creek, Lostine River, Marsh Creek, Minam River, South Fork Salmon River, and Secesh River, Sulfur Creek and Valley Creek. Forecasts were also provided for a stock of hatchery-reared PIT-tagged summer-run sockeye salmon from Redfish Lake and for the runs-at-large of Snake River wild yearling chinook salmon, and steelhead trout. The 1999 RealTime project began making forecasts for a new stock of PIT-tagged wild fall subyearling chinook salmon, as a substitute for forecasts of the wild run-at-large, discontinued June 6. Forecasts for the run-at-large were discontinued when a large release of unmarked hatchery fish into the Snake River made identification of wild fish impossible. The 1999 Program RealTime performance was comparable to its performance in previous years with respect to the run-at-large of yearling chinook salmon (whole season MAD=3.7%), and the run of hatchery-reared Redfish Lake sockeye salmon (whole season MAD=6.7%). Season-wide performance of program RealTime predictions for wild Snake River yearling chinook salmon ESUs improved in 1999, with mean MADs from the first half of the outmigrations down from 15.1% in 1998 to 4.5% in 1999. RealTime performance was somewhat worse for the run-at-large of steelhead trout in 1999, compared to 1998, particularly during the last half of the outmigration when the MAD increased from 2.7% in 1998 to 6.1% in 1999. A pattern of over-predictions was observed in half of the yearling chinook salmon ESUs and the steelhead run-at-large during the month of May. Lower-than-average outflows were observed at Lower Granite dam during the first half of May, the only period of low flows in an year with otherwise higher-than-average-flows. The passage distribution of the stock new to the RealTime forecasting project, the PIT tagged stock of fall subyearling chinook salmon, was predicted with very good accuracy (whole season MAD=4.7%), particularly during the last half of the outmigration (MAD=3.6%). The RealTime project reverted to a pre-1998 method of adjusting PIT-tagged smolt counts at Lower Granite Dam because of its superior performance during the last half of the outmigration.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

Note: This page contains sample records for the topic "river fall chinook" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
to obtain the most current and comprehensive results.

During 2002, the Idaho Department of Fish and Game continued to develop techniques to rear Chinook salmon Oncorhynchus tshawytscha to sexual maturity in captivity and to monitor their reproductive performance under natural conditions. Eyed-eggs were hydraulically collected from redds in the East Fork Salmon River (EFSR; N = 328) and the West Fork Yankee Fork Salmon River (WFYF; N = 308) to establish brood year 2002 culture cohorts. The eyed-eggs were incubated and reared at the Eagle Fish Hatchery, Eagle, Idaho (Eagle). Juveniles collected in 2000 were PIT and elastomer tagged and vaccinated against vibrio Vibrio spp. and bacterial kidney disease prior to being transferred to the NOAA Fisheries, Manchester Marine Experimental Station, Manchester, Washington (Manchester) for saltwater rearing through maturity. Smolt transfers included 203 individuals from the WFYF and 379 from the EFSR. Maturing fish transfers from Manchester to Eagle included 107 individuals from the LEM, 167 from the WFYF, and 82 from the EFSR. This was the second year maturing adults were held on chilled water at Eagle to test if water temperature manipulations could advance spawn timing. Adults from the LEM and WFYF were divided into chilled ({approx} 9 C) and ambient ({approx} 13.5 C) temperature groups while at Eagle. Forty-seven mature females from the LEM (19 chilled, 16 ambient, and 12 ambient not included in the temperature study) were spawned at Eagle with 42 males in 2002. Water temperature group was not shown to affect the spawn timing of these females, but males did mature earlier. Egg survival to the eyed stage averaged 66.5% and did not differ significantly between the temperature groups. Personnel from the Shoshone-Bannock Tribe placed a total of 47,977 eyed-eggs from these crosses in in-stream incubators. Mature adults (N = 215 including 56 precocial males) were released into the WFYF to evaluate their reproductive performance. After release, fish distributed themselves throughout the study section and displayed a progression of habitat associations and behavior consistent with progressing maturation and the onset of spawning. Twenty-six captive-reared females constructed 33 redds in the WFYF in 2002. Eighteen of these were hydraulically sampled, and eggs were collected from 17. The percentage of live eggs ranged from 0-100% and averaged 34.6%. No live eggs were found in redds spawned by brood year 1997 females. Expanding these results to the remaining redds gives an estimate of 22,900 eyed-eggs being produced by captive-reared fish in the WFYF. Additionally, 130 mature adults (including 41 precocial males) were released into the EFSR. Almost all of these fish moved out of the areas shoreline observers had access to, so no spawning behavior was observed. Radio-telemetry indicated that most of these fish initially moved downstream (although three females moved upstream as far as 7 km) and then held position.

We report on our progress from October 1989 through September 1990 on evaluating juvenile fish bypass and adult fish passage facilities at Three Mile Falls Dam on the Umatilla River. The study is a cooperative effort by the Oregon Department of Fish and Wildlife (ODFW) and the Confederated Tribes of the Umatilla Indian Reservation (CTUIR). Study objectives addressed by ODFW and CTUIR are: (1) ODFW (Report A): Operate and evaluate the juvenile fish bypass system in the West Extension Irrigation District canal at Three Mile Falls Dam; and (2) CTUIR (Report 8): Examine the passage of adult salmonids at Three Mile Falls Dam. The study is part of a program to rehabilitate anadromous fish stocks in the Umatilla River Basin that includes restorations of coho salmon Oncorhynchus Wsutch and chinook salmon 0. tshawytscha and enhancement of summer steelhead 0. mytiss.

The objectives and tasks outlined in detail in this project report were implemented during calendar year 2006 in all the watersheds of Garfield County. The Pataha Creek Watershed was selected in 1993, along with the Tucannon and Asotin Creeks, as model watersheds by the Northwest Power and Conservation Council (NPCC). In the years since 1993, other watersheds in Garfield County have been designated as salmon bearing streams and have received numerous practices formerly just designated for the Pataha Creek Watershed. The following sections show the individual practices, quantity of practices implemented, total costs, BPA costs and tons of soil saved for all the BPA funds used to protect and enhance the natural resources in the salmon bearing watersheds of Garfield County. In the year 2006, 55% of the funding received from BPA went into cost share practices. Of all the cost share received in the county, 22% came from BPA. This is largely due to other funding programs becoming available to address livestock influenced water quality problems and riparian health improvement. Over 95% of the sediment entering the streams can be tied directly to the upland and riparian areas of the watershed. The Pataha Creek, Deadman Creek, and Alpowa Creek have had steelhead runs in the past. The Pataha Creek has native and planted rainbow trout in the mid to upper portion. Suckers, pikeminow, and shiners inhabit the lower portion of Pataha Creek because of the higher water temperatures and lack of vegetation. The improvement of riparian habitat through the CREP, CCRP, and DOE grants has improved habitat for all the fish species. The lower portion of the Pataha Creek is slowly developing into spawning and rearing habitat for Chinook salmon. With the future removal of some migration barriers on the lower portion of the Deadman and Pataha, more stream miles will become useful spawning and rearing habitat. The upland projects completed during 2006 were practices that significantly reduce the erosion and resulting sedimentation from these croplands. Runoff studies conducted by WSU have shown a direct impact on reducing soil erosion by the implementation of these practices. The tree planting projects conducted under the CREP (Conservation Reserve Enhancement Program) and CRP (Continuous Conservation Reserve Program) programs have helped reduce sedimentation and have also improved the riparian zone in desired locations inside the Pataha, Deadman, and Alpowa Creek watersheds. The CREP and the CCRP programs continue with enrollment in the watersheds and are protecting the riparian areas along these three streams at an increasing level every year. Currently, over 1,100 acres of riparian habitat have been enrolled in the CREP program within these three watersheds.

Prior to 1992, decisions on dam operations and use of stored water relied on recoveries of branded hatchery fish, index counts at traps and dams, and flow patterns at the dams. The advent of PIT-tag technology provided the opportunity to precisely track the smolt migrations of many wild stocks as they pass through the hydroelectric complex and other monitoring sites on their way to the ocean. With the availability of the PIT tag, a more complete approach to these decisions was undertaken starting in 1992 with the addition of PIT-tag detections of several wild spring and summer chinook salmon stocks at Lower Granite Dam. Using data from these detections, we initiated development of a database on wild fish, addressing several goals of the Columbia River Basin Fish and Wildlife Program of the Pacific Northwest Electric Power Planning Council and Conservation Act (NPPC 1980). Section 304(d) of the program states, ''The monitoring program will provide information on the migrational characteristics of the various stocks of salmon and steelhead within the Columbia Basin.'' Further, Section 201(b) urges conservation of genetic diversity, which will be possible only if wild stocks are preserved. Section 5.9A.1 of the 1994 Fish and Wildlife Program states that field monitoring of smolt movement will be used to determine the best timing for water storage releases and Section 5.8A.8 states that continued research is needed on survival of juvenile wild fish before they reach the first dam with special attention to water quantity, quality, and several other factors. The goals of this ongoing study are as follows (1) Characterize the migration timing and estimate parr-to-smolt survival of different stocks of wild Snake River spring/summer chinook salmon smolts at Lower Granite Dam. (2) Determine whether consistent migration patterns are apparent. (3) Determine what environmental factors influence these patterns. (4) Characterize the migrational behavior and estimate survival of different wild juvenile fish stocks as they emigrate from their natal rearing areas. This study provides critical information for recovery planning, and ultimately recovery for these ESA-listed wild fish stocks. This report provides information on PIT tagging of wild chinook salmon parr in 2002 and the subsequent monitoring of these fish. Fish were monitored as they migrated through two in-stream PIT-tag monitoring systems in lower Valley Creek and at juvenile migrant traps in 2002 and 2003 as well as through interrogation systems at Lower Granite, Little Goose, Lower Monumental, McNary, John Day, and Bonneville Dams during 2003. Fish were also monitored by the PIT-tag trawl in the mouth of the Columbia River in 2003. In 2002-2003, we also continued to collect environmental data for the Baseline Environmental Monitoring Program, which was developed from 1993 to 1997. The project was designed to collect data for use in conjunction with data on parr and smolt movements to discern patterns or characteristic relationships between these movements and environmental factors. Water quality data collected consist of water temperature, dissolved oxygen, specific conductance, turbidity, water depth, and pH measured at five monitoring stations in the Salmon River Basin, Idaho.

I'm writing at the request of the Pit River Tribe to offer my professional opinion as a geochemist regarding the origin of groundwater discharge at the FallRiver Springs, Shasta Co., California. In 1997, I conducted a study of the large volume cold springs associated with the Cascade Volcanoes in northern California, in collaboration with one of my colleagues. This work was published as a Lawrence Livermore National Laboratory report (Davisson and Rose, 1997). The FallRiver Springs emerge from the distal end of the Giant Crater Lava Field, a laterally extensive basalt flow that stretches from the southern flank of Medicine Lake Volcano southward for a distance of 40 km. Both Medicine Lake Volcano and the Giant Crater Lava Field have virtually no surface water drainages. Precipitation that falls in these areas is inferred to seep into fractures in the rock, where it is carried down gradient under the force of gravity. Mean annual precipitation rates on Medicine Lake Volcano and the Giant Crater Lava field are adequate to account for the {approx}1200 ft{sup 3}/sec discharge of the FallRiver Springs. To evaluate the origin of the springs using geochemical methods, water samples were collected from the FallRiver Springs and the Medicine Lake highlands and analyzed for oxygen and hydrogen isotope ratios. The isotope ratios measured for a groundwater sample are diagnostic of the average composition of the precipitation from which the water was derived. The isotope ratios of rain and snow also vary systematically with elevation, such that groundwater derived from recharge at higher elevations can be distinguished from that which originated at lower elevations. The stable isotope data for the FallRiver Springs are consistent with groundwater recharge on the Medicine Lake Volcano and adjacent lava field. Mass balance calculations suggest that approximately half of the FallRiver Springs flow is derived from the volcanic edifice. Rose and Davisson (1996) showed that the large volume cold springs associated with the Cascade Volcanoes commonly contain dissolved CO{sub 2} that originated from the volcanoes. This volcanic CO{sub 2} component is readily identified from carbon-14 measurements of the water. Carbon-14 analyses of the FallRiver samples indicate that at least 27% of the dissolved inorganic carbon in the springs was derived from a volcanic CO{sub 2} source. Such a large volcanic CO{sub 2} flux requires that the groundwater supplying flow to the FallRiver Springs must originate from a volcano where magma degassing is actively occurring. Given the hydrogeologic configuration of the FallRiver aquifer system, it appears that the Medicine Lake Volcano is the only likely source of the volcanic CO{sub 2}. These data independently confirm the Medicine Lake highlands as a significant recharge source for the FallRiver Springs. Moreover, these data indicate that groundwater recharge occurring on Medicine Lake Volcano must interact with a CO{sub 2} volatile phase derived from the geothermal system beneath the volcano. The lack of hot springs on Medicine Lake Volcano suggests that the geothermal system underlying the volcano is relatively tightly sealed. Nevertheless, it is probable that the geothermal fluid originates from precipitation falling on the volcanic edifice. This is the same water that supplies an important fraction of the FallRiver Spring discharge. The source of the geothermal fluid can be evaluated using stable isotopes. The oxygen isotope signature of the geothermal fluid may have been modified by high temperature oxygen isotope exchange with the surrounding rock, but the hydrogen isotope signature should still be diagnostic of the origin of the fluid. Although the geothermal system appears to be largely decoupled from the shallow groundwater system that supplies the FallRiver Springs, it is uncertain what impact the development of the geothermal system as an energy resource would have on groundwater circulation patterns on the volcano. Given the importance of the FallRiver Springs as a water resource for the

I'm writing at the request of the Pit River Tribe to offer my professional opinion as a geochemist regarding the origin of groundwater discharge at the FallRiver Springs, Shasta Co., California. In 1997, I conducted a study of the large volume cold springs associated with the Cascade Volcanoes in northern California, in collaboration with one of my colleagues. This work was published as a Lawrence Livermore National Laboratory report (Davisson and Rose, 1997). The FallRiver Springs emerge from the distal end of the Giant Crater Lava Field, a laterally extensive basalt flow that stretches from the southern flank of Medicine Lake Volcano southward for a distance of 40 km. Both Medicine Lake Volcano and the Giant Crater Lava Field have virtually no surface water drainages. Precipitation that falls in these areas is inferred to seep into fractures in the rock, where it is carried down gradient under the force of gravity. Mean annual precipitation rates on Medicine Lake Volcano and the Giant Crater Lava field are adequate to account for the {approx}1200 ft{sup 3}/sec discharge of the FallRiver Springs. To evaluate the origin of the springs using geochemical methods, water samples were collected from the FallRiver Springs and the Medicine Lake highlands and analyzed for oxygen and hydrogen isotope ratios. The isotope ratios measured for a groundwater sample are diagnostic of the average composition of the precipitation from which the water was derived. The isotope ratios of rain and snow also vary systematically with elevation, such that groundwater derived from recharge at higher elevations can be distinguished from that which originated at lower elevations. The stable isotope data for the FallRiver Springs are consistent with groundwater recharge on the Medicine Lake Volcano and adjacent lava field. Mass balance calculations suggest that approximately half of the FallRiver Springs flow is derived from the volcanic edifice. Rose and Davisson (1996) showed that the large volume cold springs associated with the Cascade Volcanoes commonly contain dissolved CO{sub 2} that originated from the volcanoes. This volcanic CO{sub 2} component is readily identified from carbon-14 measurements of the water. Carbon-14 analyses of the FallRiver samples indicate that at least 27% of the dissolved inorganic carbon in the springs was derived from a volcanic CO{sub 2} source. Such a large volcanic CO{sub 2} flux requires that the groundwater supplying flow to the FallRiver Springs must originate from a volcano where magma degassing is actively occurring. Given the hydrogeologic configuration of the FallRiver aquifer system, it appears that the Medicine Lake Volcano is the only likely source of the volcanic CO{sub 2}. These data independently confirm the Medicine Lake highlands as a significant recharge source for the FallRiver Springs. Moreover, these data indicate that groundwater recharge occurring on Medicine Lake Volcano must interact with a CO{sub 2} volatile phase derived from the geothermal system beneath the volcano. The lack of hot springs on Medicine Lake Volcano suggests that the geothermal system underlying the volcano is relatively tightly sealed. Nevertheless, it is probable that the geothermal fluid originates from precipitation falling on the volcanic edifice. This is the same water that supplies an important fraction of the FallRiver Spring discharge. The source of the geothermal fluid can be evaluated using stable isotopes. The oxygen isotope signature of the geothermal fluid may have been modified by high temperature oxygen isotope exchange with the surrounding rock, but the hydrogen isotope signature should still be diagnostic of the origin of the fluid. Although the geothermal system appears to be largely decoupled from the shallow groundwater system that supplies the FallRiver Springs, it is uncertain what impact the development of the geothermal system as an energy resource would have on groundwater circulation patterns on the volcano. Given the importance of the FallRiver Springs as a water resource for the

The objectives are: (1) Estimate number and distribution of spring Chinook salmon Oncorhynchus tshawytscha redds and spawners in the John Day River subbasin; and (2) Estimate smolt-to-adult survival rates (SAR) and out-migrant abundance for spring Chinook and summer steelhead O. mykiss and life history characteristics of summer steelhead. The John Day River subbasin supports one of the last remaining intact wild populations of spring Chinook salmon and summer steelhead in the Columbia River Basin. These populations, however, remain depressed relative to historic levels. Between the completion of the life history and natural escapement study in 1984 and the start of this project in 1998, spring Chinook spawning surveys did not provide adequate information to assess age structure, progeny-to-parent production values, smolt-to-adult survival (SAR), or natural spawning escapement. Further, only very limited information is available for steelhead life history, escapement, and productivity measures in the John Day subbasin. Numerous habitat protection and rehabilitation projects to improve salmonid freshwater production and survival have also been implemented in the basin and are in need of effectiveness monitoring. While our monitoring efforts outlined here will not specifically measure the effectiveness of any particular project, they will provide much needed background information for developing context for project-specific effectiveness monitoring efforts. To meet the data needs as index stocks, to assess the long-term effectiveness of habitat projects, and to differentiate freshwater and ocean survival, sufficient annual estimates of spawner escapement, age structure, SAR, egg-to-smolt survival, smolt-per-redd ratio, and freshwater habitat use are essential. We have begun to meet this need through spawning ground surveys initiated for spring Chinook salmon in 1998 and smolt PIT-tagging efforts initiated in 1999. Additional sampling and analyses to meet these goals include an estimate of smolt abundance and SAR rates, and an updated measure of the freshwater distribution of critical life stages. Because Columbia Basin managers have identified the John Day subbasin spring Chinook population as an index population for assessing the effects of alternative future management actions on salmon stocks in the Columbia Basin (Schaller et al. 1999) we continue our ongoing studies. This project is high priority based on the high level of emphasis the NWPPC Fish and Wildlife Program, Subbasin Summaries, NMFS, and the Oregon Plan for Salmon and Watersheds have placed on monitoring and evaluation to provide the real-time data to guide restoration and adaptive management in the region. By implementing the proposed program we have been able to address many of the goals for population status monitoring, such as defining areas currently used by spring Chinook for holding and spawning habitats and determining range expansion or contraction of summer rearing and spawning populations. The BiOp describes these goals as defining population growth rates (adult monitoring), detecting changes in those growth rates or relative abundance in a reasonable time (adult/juvenile monitoring), estimating juvenile abundance and survival rates (juvenile/smolt monitoring), and identifying stage-specific survival (adult-to-smolt, smolt-to-adult).

A stochastic simulation model of spring chinook population dynamics was parameterized using 36 years of redd count data from five index streams on the middle fork of the Salmon River in Idaho. Two versions of the model, one in which spawning age structure was presumed to follow an evolutionarily stable strategy and another in which spawning age structure was constrained to observed values were examined. The models were then used to generate 1000 statistically representative population projections over the next 100 years to assess risk of extinction and prospects for stock rebuilding. Current levels of production and mortality appear to suffice for maintaining the status quo, virtually assuring persistence over the next 100 years, barring catastophes, but providing no hope for rebuilding. A doubling of the current population level over the next 100 years can be expected to follow an increase in {alpha} (density independent mortality or fry production) of 5 to 25%, but rebuilding to the population levels prevailing in the 1950`s will require an increase in {alpha} of at least 37%.

This report summarizes the Nez Perce Tribe (NPT) Department of Fisheries Resources Management (DFRM) results for the Lower Snake River Compensation Plan (LSRCP) Hatchery Evaluation studies and the Imnaha River Smolt Monitoring Program (SMP) for the 2007 smolt migration from the Imnaha River, Oregon. These studies are closely coordinated and provide information about juvenile natural and hatchery spring/summer Naco x (Chinook Salmon; Oncorhynchus tshawytscha) and Heeyey (steelhead; O. mykiss) biological characteristics, emigrant timing, survival, arrival timing and travel time to the Snake River dams and McNary Dam (MCD) on the Columbia River. These studies provide information on listed Naco x (Chinook salmon) and Heeyey (steelhead) for the Federal Columbia River Power System (FCRPS) Biological Opinion (NMFS 2000). The Lower Snake River Compensation Plan program's goal is to maintain a hatchery production program of 490,000 Naco x (Chinook salmon) and 330,000 Heeyey (steelhead) for annual release in the Imnaha River (Carmichael et al. 1998, Whitesel et al. 1998). These hatchery releases occur to compensate for fish losses due to the construction and operation of the four lower Snake River hydroelectric facilities. One of the aspects of the LSRCP hatchery evaluation studies in the Imnaha River is to determine natural and hatchery Naco x (Chinook salmon) and Heeyey (steelhead) smolt performance, emigration characteristics and survival (Kucera and Blenden 1998). A long term monitoring effort was established to document smolt emigrant timing and post release survival within the Imnaha River, estimate smolt survival downstream to McNary Dam, compare natural and hatchery smolt performance, and collect smolt-to-adult return information. This project collects information for, and is part of, a larger effort entitled Smolt Monitoring by Federal and Non-Federal Agencies (BPA Project No. 198712700). This larger project provides data on movement of smolts out of major drainages and past dams on the Snake River and Columbia River. In season indices of migration strength and migration timing are provided for the run-at large at key monitoring sites. Marked smolts are utilized to measure travel time and estimate survival through key index reaches. Fish quality and descaling measures are recorded at each monitoring site and provide indicators of the health of the run. Co-managers in the Imnaha River subbasin (Ecovista 2004) have identified the need to collect information on life history, migration patterns, juvenile emigrant abundance, reach specific smolt survivals, and Smolt-to-Adult Return rates (SAR's) for both Heeyey (steelhead) and Naco x (Chinook salmon) smolts. The current study provides information related to the majority of the high priority data needs. Current funding does not allow for determination of a total (annual) juvenile emigrant abundance and lack of adult passive integrated transponder (PIT) tag detectors at the mouth of the Imnaha River results in the inability to calculate tributary specific SAR's. Information is shared with the Fish Passage Center (FPC) on a real time basis during the spring emigration period. The Bonneville Power Administration (BPA) and the United States Fish and Wildlife Service (USFWS) contracted the NPT to monitor emigration timing and tag up to 19,000 emigrating natural and hatchery Naco x (Chinook salmon) and Heeyey (steelhead) smolts from the Imnaha River with passive integrated transponder (PIT) tags. The completion of trapping in the spring of 2007 marked the 16th year of emigration studies on the Imnaha River, and the 14th year of participating in the FPC smolt monitoring program. Monitoring and evaluation objectives were to: (1) Evaluate effects of flow, temperature and other environmental factors on juvenile migration timing. (2) Determine emigration timing, travel time, and in-river survival of PIT tagged hatchery Naco x (Chinook salmon) smolts released at the Imnaha River acclimation facility to the Imnaha River juvenile migration trap. (3) Monitor the daily catch and biological cha

Anadromous salmonid stocks have declined in both the Grande Ronde River Basin (Lower Snake River Compensation Plan (LSRCP) Status Review Symposium 1998) and in the entire Snake River Basin (Nehlsen et al. 1991), many to the point of extinction. The Grande Ronde River Basin historically supported large populations of fall and spring chinook (Oncorhynchus tshawytscha), sockeye (O. nerka), and coho (O. kisutch) salmon and steelhead trout (O. mykiss) (Nehlsen et al. 1991). The decline of chinook salmon and steelhead populations and extirpation of coho and sockeye salmon in the Grande Ronde River Basin was, in part, a result of construction and operation of hydroelectric facilities, over fishing, and loss and degradation of critical spawning and rearing habitat in the Columbia and Snake River basins (Nehlsen et al. 1991). Hatcheries were built in Oregon, Washington and Idaho under the Lower Snake River Compensation Plan (LSRCP) to compensate for losses of anadromous salmonids due to the construction and operation of the lower four Snake River dams. Lookingglass Hatchery (LGH) on Lookingglass Creek, a tributary of the Grande Ronde River, was completed under LSRCP in 1982 and has served as the main incubation and rearing site for chinook salmon programs for Grande Ronde and Imnaha rivers in Oregon. Despite these hatchery programs, natural spring chinook populations continued to decline resulting in the National Marine Fisheries Service (NMFS) listing Snake River spring/summer chinook salmon as ''threatened'' under the federal Endangered Species Act (1973) on 22 April 1992. Continuing poor escapement levels and declining population trends indicated that Grande Ronde River basin spring chinook salmon were in imminent danger of extinction. These continuing trends led fisheries co-managers in the basin to initiate the Grande Ronde Endemic Spring Chinook Salmon Supplementation Program (GRESCSSP) in order to prevent extinction and preserve options for use of endemic fish stocks in future artificial propagation programs. The GRESCSSP was implemented in three Grande Ronde River basin tributaries; the Lostine and upper Grande Ronde rivers and Catherine Creek. The GRESCSSP employs two broodstock strategies utilizing captive and conventional brood sources. The captive brood program began in 1995, with the collection of parr from the three tributary areas. The conventional broodstock component of the program began in 1997 with the collection of natural adults returning to these tributary areas. Although LGH was available as the primary production facility for spring chinook programs in the Grande Ronde Basin, there were never any adult or juvenile satellite facilities developed in the tributary areas that were to be supplemented. An essential part of the GRESCSSP was the construction of adult traps and juvenile acclimation facilities in these tributary areas. Weirs were installed in 1997 for the collection of adult broodstock for the conventional component of the program. Juvenile facilities were built in 2000 for acclimation of the smolts produced by the captive and conventional broodstock programs and as release sites within the natural production areas of their natal streams. The Confederated Tribes of the Umatilla Indian Reservation (CTUIR) operate both the juvenile acclimation and adult trapping facilities located on Catherine Creek and the upper Grande Ronde River under this project. The Nez Perce Tribe (NPT) operate the facilities on the Lostine River under a sister project. Hatcheries were also built in Oregon, Washington and Idaho under the LSRCP to compensate for losses of summer steelhead due to the construction and operation of the lowest four Snake River dams. Despite these harvest-driven hatchery programs, natural summer steelhead populations continued to decline as evidenced by declining counts at Lower Granite Dam since 1995 (Columbia River Data Access in Real Time, DART) and low steelhead redd counts on index streams in the Grande Ronde Basin. Because of low escapement the Snake River summer steelhead were listed as threat

The Pacific Northwest National Laboratory (PNNL) performed tests to determine whether a significant difference in fish passage existed between a 6-ft screening facility built perpendicularly to canal flow and an identical screening facility with the screen mounted at a 45-degree angle to the approach channel. A modular drum screen built by the Washington Department of Fish and Wildlife was installed at PNNL`s Aquatic Ecology research laboratory in Richland, Washington. Fallchinook salmon fry were introduced into the test system, and their movements were monitored. A total of 14 tests (400 fish per test) that lasted 20 hours were completed during April and May, 1996. There was no significant difference in fish passage rate through the two approach configurations. Attraction flow to the bypass across the face of the screen was more evident for the angled approach, although this did not appear to play a significant role in attracting fish to the bypass. Approach velocities at the face of the screen did not exceed the 0.4 fps criteria for either approach configuration and posed not threat to fish. No fish passed over, around, or through the drum screen during any test.

The purpose of this intensive monitoring project is to determine the number of returning chinook salmon and steelhead trout adults necessary to achieve optimal smolt production and develop habitat enhancement mitigation accounting based on increases in wild/natural smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects. The project to date has developed good information on the relationship between chinook salmon adult escapement and smolt production at low to medium seeding levels. Adult chinook salmon escapements have been too low for us to test carrying capacity. For steelhead trout, they have developed a relationship between parr populations and smolt production at low to high seeding levels, with limited information on carrying capacity.

Studies were conducted to describe current habitat conditions in the White River basin above White RiverFalls and to evaluate the potential to produce anadromous fish. An inventory of spawning and rearing habitats, irrigation diversions, and enhancement opportunities for anadromous fish in the White River drainage was conducted. Survival of juvenile fish at White RiverFalls was estimated by releasing juvenile chinook and steelhead above the falls during high and low flow periods and recapturing them below the falls in 1983 and 1984. Four alternatives to provide upstream passage for adult salmon and steelhead were developd to a predesign level. The cost of adult passage and the estimated run size of anadromous fish were used to determine the benefit/cost of the preferred alternative. Possible effects of the introduction of anadromous fish on resident fish and on nearby Oak Springs Hatchery were evaluated. This included an inventory of resident species, a genetic study of native rainbow, and the identification of fish diseases in the basin. This volume contains appendices of habitat survey data, potential production, resident fish population data, upstream passage designs, and benefit/cost calculations. (ACR)

Chinook salmon in the Snake River basin were listed as threatened under the Endangered Species Act in 1992 (NMFS 1992). The Secesh River represents the only stream in the Snake River basin where natural origin (wild) salmon escapement monitoring occurs at the population level, absent a supplementation program. As such the Secesh River has been identified as a long term salmon escapement and productivity monitoring site by the Nez Perce Tribe Department of Fisheries Resources Management. Salmon managers will use this data for effective population management and evaluation of the effect of conservation actions on a natural origin salmon population. The Secesh River also acts as a reference stream for supplementation program comparison. Dual frequency identification sonar (DIDSON) was used to determine adult spring and summer Chinook salmon escapement in the Secesh River in 2008. DIDSON technology was selected because it provided a non-invasive method for escapement monitoring that avoided listed species trapping and handling incidental mortality, and fish impedance related concerns. The DIDSON monitoring site was operated continuously from June 13 to September 14. The first salmon passage was observed on July 3. DIDSON site total estimated salmon escapement, natural and hatchery fish, was 888 fish {+-} 65 fish (95% confidence interval). Coefficient of variation associated with the escapement estimate was 3.7%. The DIDSON unit was operational 98.1% of the salmon migration period. Adult salmon migration timing in the Secesh River occurred over 74 days from July 3 to September 14, with 5,262 total fish passages observed. The spawning migration had 10%, median, and 90% passage dates of July 8, July 16, and August 12, respectively. The maximum number of net upstream migrating salmon was above the DIDSON monitoring site on August 27. Validation monitoring of DIDSON target counts with underwater optical cameras occurred for species identification. A total of 860 optical camera identified salmon passage observations were identical to DIDSON target counts. However, optical cameras identified eight jack salmon (3 upstream, 5 downstream) less than 55 cm in length that DIDSON did not count as salmon because of the length criteria employed ({ge} 55 cm). Precision of the DIDSON technology was evaluated by comparing estimated net upstream salmon escapement and associated 95% confidence intervals between two DIDSON sonar units operated over a five day period. The DIDSON 1 salmon escapement was 145.7 fish ({+-} 2.3), and the DIDSON 2 escapement estimate was 150.5 fish ({+-} 5). The overlap in the 95% confidence intervals suggested that the two escapement estimates were not significantly different from each other. Known length salmon carcass trials were conducted in 2008 to examine the accuracy of manually measured lengths, obtained using DIDSON software, on high frequency files at a 5 m window length. Linear regression demonstrated a highly significant relationship between known lengths and manually measured salmon carcass lengths (p < 0.0001). A positive bias in manual length measurement of 6.8% to 8% existed among the two observers in the analysis. Total Secesh River salmon escapement (natural origin and hatchery) in 2008 was 912 fish. Natural origin salmon escapement in the entire Secesh River drainage was 847 fish. The estimated natural origin spawner abundance was 836 fish. Salmon spawner abundance in 2008 increased by three fold compared to 2007 abundance levels. The 10 year geometric mean natural origin spawner abundance was 538 salmon and was below the recommended viable population threshold level established by the ICTRT (2007). One additional Snake River basin salmon population was assessed for comparison of natural origin salmon spawner abundance. The Johnson Creek/EFSF Salmon River population had a 10 year geometric mean natural origin spawner abundance of 254 salmon. Salmon spawner abundance levels in both streams were below viable population thresholds. DIDSON technology has been used in the Secesh River to determine salmo

Abstract.-We measured scour of the redds of chinook salmon Oncorhynchus tshawytscha on dredge tailings and natural substrates in three tributaries of the Klamath River, California. We measured maximum scour with scour chains and net scour by surveying before and after high winter flows. Scour of chinook salmon redds located on dredge tailings exceeded scour of redds on natural substrates, although the difference varied among streams. Our results show that fisheries managers should consider the potential negative effects of dredge tailings on the spawning success of fall-spawning fishes such as chinook salmon and coho salmon O. kisutch. Suction dredging for gold is common in many streams and rivers in western North America and in gold-bearing lotic habitats worldwide (Hall

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

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The purpose of this investigation is to assess the strengths and limitations of existing freeze brand recapture data in describing the migratory dynamics of juvenile salmonids in the mainstream, impounded sections of the Snake and Columbia Rivers. With the increased concern over the threatened status of spring and summer chinook salmon in the Snake River drainage, we used representative stocks for these races as our study populations. However, statistical considerations resultant from these analyses apply to other species and drainages as well. This report describes analyses we conducted using information derived from freeze-branded groups. We examined both index production groups released from hatcheries upstream from Lower Granite Dam (1982--1990) and freeze-branded groups used as controls in smolt transportation evaluations conducted by the National Marine Fisheries Service (1986, 1989). The scope of our analysis was limited to describing travel time estimates and derived relationships, as well as reach survival estimates through the mainstem Snake River from Lower Granite to McNary Dam.

Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were collected at Threemile Dam from August 30, 1996 to August 26, 1997. A total of 2,477 summer steelhead (Oncorhynchus mykiss); 646 adult, 80 jack, and 606 subjack fallchinook (O. tshawytscha); 618 adult and 24 jack coho (O. kisutch); and 2,194 adult and four jack spring chinook (O. tshawytscha) were collected. All fish were trapped at the east bank facility. Of the fish collected, 22 summer steelhead; 18 adult and two jack fallchinook; five adult coho; and 407 adult and three jack spring chinook were hauled upstream from Threemile Dam. There were 2,245 summer steelhead; 70 adult, 51 jack and 520 subjack fallchinook; 593 adult and 24 jack coho; and 1,130 adult spring chinook released at Threemile Dam I In addition, 110 summer steelhead; 551 adult and 25 jack fallchinook; and 600 adult spring chinook were collected for broodstock. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts, The canal was open for a total of 210 days between December 16, 1996 and July 30, 1997. During that period, fish were bypassed back to the river 175 days and were trapped on 35 days, An estimated 1,675 pounds of juvenile fish were transported from Westland to the Umatilla River boat ramp (RM 0.5), Approximately 80% of the juveniles transported were salmonids, No steelhead kelts were hauled from Westland this year. The Threemile Dam west bank juvenile bypass was operated from October 4 to November 1, 1996 and from March 26 to July 7, 1997. The juvenile trap was not operated this year. 6 refs., 6 figs., 6 tabs.

We investigated differences in the statistical power to assign parentage between an artificially propagated and wild salmon population. The propagated fish were derived from the wild population, and are used to supplement its abundance. Levels of genetic variation were similar between the propagated and wild groups at 11 microsatellite loci, and exclusion probabilities were >0.999999 for both groups. The ability to unambiguously identify a pair of parents for each sampled progeny was much lower than expected, however. Simulations demonstrated that the proportion of cases the most likely pair of parents were the true parents was lower for propagated parents than for wild parents. There was a clear relationship between parentage assignment ability and the degree of linkage disequilibrium, the estimated effective number of breeders that produced the parents, and the size of the largest family within the potential parents. If a stringent threshold for parentage assignment was used, estimates of relative fitness were biased downward for the propagated fish. The bias appeared to be largely eliminated by either fractionally assigning progeny among parents in proportion to their likelihood of parentage, or by assigning progeny to the most likely set of parents without using a statistical threshold. We used a DNA-based parentage analysis to measure the relative reproductive success of hatchery- and natural-origin spring Chinook salmon in the natural environment. Both male and female hatchery-origin fish produced far fewer juvenile progeny per parent when spawning naturally than did natural origin fish. Differences in age structure, spawning location, weight and run timing were responsible for some of the difference in fitness. Male size and age had a large influence on fitness, with larger and older males producing more offspring than smaller or younger individuals. Female size had a significant effect on fitness, but the effect was much smaller than the effect of size on male fitness. For both sexes, run time had a smaller but still significant effect on fitness, with earlier returning fish favored. Spawning location within the river had a significant effect on fitness for both males and females, and for females explained most of the reduced fitness observed for hatchery fish in this population. While differences have been reported in the relative reproductive success of hatchery and naturally produced salmonids Oncorhynchus spp., factors explaining the differences are often confounded. We examined the spawning site habitat and redd structure variables of hatchery and naturally produced spring Chinook salmon O. tshawytscha of known size that spawned in two tributaries of the Wenatchee River. We controlled for variability in spawning habitat by limiting our analysis to redds found within four selected reaches. No difference in the instantaneous spawner density or location of the redd in the stream channel was detected between reaches. Within each reach, no difference in the fork length or weight of hatchery and naturally produced fish was detected. While most variables differed between reaches, we found no difference in redd characteristics within a reach between hatchery and naturally produced females. Correlation analysis of fish size and redd characteristics found several weak but significant relationships suggesting larger fish contract larger redds in deeper water. Spawner density was inversely related to several redd structure variables suggesting redd size may decrease as spawner density increases. Results should be considered preliminary until samples size and statistical power goals are reached in future years. Trends in relative reproductive success of hatchery and naturally produced spring Chinook salmon Oncorhynchus tshawytscha in the Wenatchee Basins suggest females that spawn in the upper reaches of the tributaries produced a great number of offspring compared to females that spawn in the lower reaches of the tributaries. To better understand this trend, redd microhabitat data was collected from spring Chinook sa

Select ecological interactions and spring chinook salmon residual/precocial abundance were monitored in 1998 as part of the Yakima/Klickitat Fisheries Project's supplementation monitoring program. Monitoring these variables is part of an effort to help evaluate the factors that contribute to, or limit supplementation success. The ecological interactions that were monitored were prey consumption, competition for food, and competition for space. The abundance of spring chinook salmon life-history forms that have the potential to be influenced by supplementation and that have important ecological and genetic roles were monitored (residuals and precocials). Residual spring chinook salmon do not migrate to the ocean during the normal emigration period and continue to rear in freshwater. Precocials are those salmon that precocially mature in freshwater. The purpose of sampling during 1998 was to collect baseline data one year prior to the release of hatchery spring chinook salmon which occurred during the spring of 1999. All sampling that the authors report on here was conducted in upper Yakima River during summer and fall 1998. The stomach fullness of juvenile spring chinook salmon during the summer and fall averaged 12%. The food competition index suggested that mountain whitefish (0.59), rainbow trout (0.55), and redside shiner (0.55) were competing for food with spring chinook salmon. The space competition index suggested that rainbow trout (0.31) and redside shiner (0.39) were competing for space with spring chinook salmon but mountain whitefish (0.05) were not. Age-0 spring chinook salmon selected a fairly narrow range of microhabitat parameters in the summer and fall relative to what was available. Mean focal depths and velocities for age 0 spring chinook salmon during the summer were 0.5 m {+-} 0.2 m and 0.26 m/s {+-} 0.19 m/s, and during the fall 0.5 m {+-} 0.2 m and 0.24 m/s {+-} 0.18 m/s. Among potential competitors, age 1+ rainbow trout exhibited the greatest degree of microhabitat overlap with spring chinook salmon. Abundance of naturally occurring spring chinook salmon residuals (age 1+ during the summer) was low (< 0.007/m), representing less than 2% of the naturally produced spring chinook salmon (age 0+ and age 1+ during the summer). Abundance of naturally occurring spring chinook salmon that complete their life cycle in freshwater was high relative to anadromous adults. The authors observed an average of 9.5 precocially mature spring chinook salmon on redds with anadromous adults. In addition, 87% of the redds with anadromous adults present also had precocial males attending. All findings in this report should be considered preliminary and subject to further revision as more data and analytical results become available.

Columbia Basin Research uses the COMPASS model on a daily basis during the outmigration of Snake RiverChinook and steelhead smolts to predict downstream passage and survival. Fish arrival predictions and observations from program RealTime along with predicted and observed environmental conditions are used to make in-season predictions of arrival and survival to various dams in the Columbia and Snake Rivers. For 2008, calibrations of travel and survival parameters for two stocks of fish-Snake River yearling PIT-tagged wild chinook salmon (chin1pit) and Snake River PIT-tagged steelhead (lgrStlhd)-were used to model travel and survival of steelhead and chinook stocks from Lower Granite Dam (LWG) or McNary Dam (MCN) to Bonneville Dam (BON). This report summarizes the success of the COMPASS/RealTime process to model these migrations as they occur. We compared model results on timing and survival to data from two sources: stock specific counts at dams and end-of-season control survival estimates (Jim Faulkner, NOAA, pers. comm. Dec. 16, 2008). The difference between the predicted and observed day of median passage and the Mean Absolute Deviation (MAD) between predicted and observed arrival cumulative distributions are measures of timing accuracy. MAD is essentially the average percentage error over the season. The difference between the predicted and observed survivals is a measure of survival accuracy. Model results and timing data were in good agreement from LWG to John Day Dam (JDA). Predictions of median passage days for the chin1pit and lgrStlhd stocks were 0 and 2 days (respectively) later than observed. MAD for chin1pit and lgrStlhd stocks at JDA were 2.3% and 5.9% (respectively). Between JDA and BON modeling and timing data were not as well matched. At BON, median passage predictions were 6 and 10 days later than observed and MAD values were 7.8% and 16.0% respectively. Model results and survival data were in good agreement from LWG to MCN. COMPASS predicted survivals of 0.77 and 0.69 for chin1pit and lgrStlhd, while the data control's survivals were 0.79 and 0.68. The differences are 0.02 and 0.01 (respectively), nearly identical. However, from MCN to BON, COMPASS predicted survivals of 0.74 and 0.69 while the data controls survivals were 0.47 and 0.53 respectively. Differences of 0.27 and 0.16. In summary: Travel and survival of chin1pit and lgrStlhd stocks were well modeled in the upper reaches. Fish in the lower reaches down through BON suffered unmodeled mortality, and/or passed BON undetected. A drop in bypass fraction and unmodeled mortality during the run could produce such patterns by shifting the observed median passage day to appear artificially early.

The purpose of this intensive monitoring project is to determine the number of returning chinook and steelhead adults necessary to achieve optimal smolt production and develop mitigation accounting based on increases in smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects.

The purpose of this intensive monitoring project is to determine the number of returning chinook salmon Oncorhynchus tshawytscha and steelhead trout 0. mykiss adults necessary to achieve optimal smolt production, and develop mitigation accounting based on increases in smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects.

The combined juvenile and adult detection histories of PIT-tagged wild salmonids migrating through the Federal Columbia River Power System (FCRPS) were analyzed using the ROSTER (River-Ocean Survival and Transportation Effects Routine) statistical release-recapture model. This model, implemented by software Program ROSTER, was used to estimate survival on large temporal and spatial scales for PIT-tagged wild spring and summer Chinook salmon and steelhead released in the Snake River Basin upstream of Lower Granite Dam from 1996 to 2004. In addition, annual results from wild salmonids were compared with results from hatchery salmonids, which were presented in a previous report in this series (Buchanan, R. A., Skalski, J. R., Lady, J. L., Westhagen, P., Griswold, J., and Smith, S. 2007, 'Survival and Transportation Effects for Migrating Snake River Hatchery Chinook Salmon and Steelhead: Historical Estimates from 1996-2003', Technical report, Bonneville Power Administration, Project 1991-051-00). These results are reported here. Annual estimates of the smolt-to-adult return ratio (SAR), juvenile inriver survival from Lower Granite to Bonneville, the ocean return probability from Bonneville to Bonneville, and adult upriver survival from Bonneville to Lower Granite are reported. Annual estimates of transport-inriver (T/I) ratios and differential post-Bonneville mortality (D) are reported on a dam-specific basis for release years with sufficient numbers of wild PIT-tagged smolts transported. Transportation effects are estimated only for dams where at least 1,000 tagged wild smolts were transported from a given upstream release group. Because few wild Chinook salmon and steelhead tagged upstream of Lower Granite Dam were transported before the 2003 release year, T/I and D were estimated only for the 2003 and 2004 release years. Performance measures include age-1-ocean adult returns for steelhead, but not for Chinook salmon. Spring and summer Chinook salmon release groups were pooled across the entire Snake River Basin upstream of Lower Granite Dam for this report. Annual estimates of SAR from Lower Granite back to Lower Granite averaged 0.92% with an estimated standard error (dSE) of 0.25% for wild spring and summer Chinook salmon for tagged groups released from 1996 through 2004, omitting age-1-ocean (jack) returns. Only for the 1999 and 2000 release years did the wild Chinook SAR approach the target value of 2%, identified by the NPCC as the minimum SAR necessary for recovery. Annual estimates of SAR for wild steelhead from the Snake River Basin averaged 0.63% (dSE = 0.15%), including age-1-ocean returns, for release years 1996 through 2004. For release years when the ocean return probability from Bonneville back to Bonneville could be estimated (i.e., 1999 through 2004), it was estimated that on average approximately 83% of the total integrated mortality for nontransported, tagged wild spring and summer Chinook, and 78% for steelhead (omitting the 2001 release year), occurred during the ocean life stage (i.e., from Bonneville to Bonneville). This suggests that additional monitoring and research efforts should include the ocean and estuary environment. Annual estimates of the dam-specific T/I for Lower Granite Dam were available for the 2003 and 2004 release years for both wild Chinook salmon and wild steelhead. The estimated T/I for Lower Granite was significantly > 1.0 for Chinook in 2004 (P < 0.0001) and for steelhead in both 2003 (P < 0.0001) and 2004 (P < 0.0001), indicating that for these release years, wild fish transported at Lower Granite returned there in higher proportions than fish that were returned to the river at Lower Granite, or that passed Lower Granite without detection as juveniles. Annual estimates of the dam-specific T/I for Little Goose Dam were available for wild Chinook salmon for both 2003 and 2004. The estimated T/I for Little Goose was significantly > 1.0 for wild Chinook in 2004 (P = 0.0024), but not in 2003 (P = 0.1554). Differential post-Bonneville mortality (D) is the ratio of pos

During mid-1990s, Pacific States Marine Fisheries Commission (PSMFC) and Washington Department of Fish and Wildlife (WDFW) identified several populations of salmon spawning approximately three miles downstream of Bonneville Dam on the Columbia River. These populations are exposed to rapidly changing flow regimes associated with Bonneville Dam's operation. This study investigated the relationship between changing water levels and stranding or entrapment of juvenile salmon in the Ives Island area. Walking surveys of the Ives Island and Pierce Island shorelines were conducted every one to three days throughout the juvenile emigration period. The nearby shorelines of the Washington and Oregon mainland were also surveyed. Between January and June of 2005, surveyors examined 21 substantial entrapments and 20 stranding sites. A total of 14,337 salmonids, made up of three species, were found either entrapped or stranded. Nearly 92% of the salmonids were chinook salmon (Oncorhynchus tshawytscha), 4.5% were federally listed chum salmon (Oncorhynchus keta), and 3.8% were coho salmon (Oncorhynchus kisutch). When compared to the 2004 study year, 2005 showed an 83% increase in the overall number of observed entrapped or stranded juvenile salmon. Much of this increase can be attributed to one entrapment found along the north shore of Pierce Island (identified as E501). E501 has historically been known to contain relatively large numbers of entrapped salmon. Even so, the number of entrapped salmon observed during 2005 was a 732% increase (5926) over any prior study years. Over 83% of all chum, 63.1% of all chinook, and 63.2% of all coho sampled during 2005 were retrieved from entrapments that were likely to have formed when Bonneville Dam tailwater levels dropped to elevations between 11.5 and 12.9 feet. Peak numbers of chum and chinook were sampled in mid-April when tailwater levels ranged between 11.6ft and 15.6ft. Peak numbers of coho were sampled during the last week of February, mid-March, and mid-April when tailwater level ranged between 11.4 and 14.3 feet, 11.5 and 15.3 ft, and 11.6 and 15.6 feet, respectively. The fork length data indicate that the majority of the entrapped and stranded salmon are in the 35-50 mm range. Stranded members of all three salmon species had mean fork lengths that were 8% to 30% shorter than those of their entrapped counterparts. The locations and habitat attributes of entrapments containing the majority of the observed juvenile salmon remain fairly constant from year to year. Changes in entrapment rankings appear to be more reflective of changes in prevailing tailwater levels than they are of changes in geography, vegetation, or fish behavior. Data collected over the past six study years indicates that there are entrapments that are capable of entrapping large numbers of salmon as various tailwater levels. Avoiding specific tailwater ranges may not minimize the impact of juvenile stranding. The only way to substantially minimize the impact of stranding is to allow no tailwater fluctuations or to only allow a steady increase of the tailwater level throughout the juvenile emigration period.

In 2005, the University of Washington developed a new statistical model to analyze the combined juvenile and adult detection histories of PIT-tagged salmon migrating through the Federal Columbia River Power System (FCRPS). This model, implemented by software Program ROSTER (River-Ocean Survival and Transportation Effects Routine), has been used to estimate survival and transportation effects on large temporal and spatial scales for PIT-tagged hatchery spring and summer Chinook salmon and steelhead released in the Snake River Basin from 1996 to 2003. Those results are reported here. Annual estimates of the smolt-to-adult return ratio (SAR), juvenile inriver survival from Lower Granite to Bonneville, the ocean return probability from Bonneville to Bonneville, and adult upriver survival from Bonneville to Lower Granite are reported. Annual estimates of transport-inriver (T/I) ratios and differential post-Bonneville mortality (D) are reported on both a systemwide basis, incorporating all transport dams analyzed, and a dam-specific basis. Transportation effects are estimated only for dams where at least 5,000 tagged smolts were transported from a given upstream release group. Because few tagged hatchery steelhead were transported in these years, no transportation effects are estimated for steelhead. Performance measures include age-1-ocean adult returns for steelhead, but not for Chinook salmon. Annual estimates of SAR from Lower Granite back to Lower Granite averaged 0.71% with a standard error (SE) of 0.18% for spring Chinook salmon from the Snake River Basin for tagged groups released from 1996 through 2003, omitting age-1-ocean (jack) returns. For summer Chinook salmon from the Snake River Basin, the estimates of annual SAR averaged 1.15% (SE=0.31%). Only for the release years 1999 and 2000 did the Chinook SAR approach the target value of 2%, identified by the NPCC as the minimum SAR necessary for recovery. Annual estimates of SAR for hatchery steelhead from the Snake River Basin averaged 0.45% (SE=0.11%), including age-1-ocean returns, for release years 1996 through 2003. For release years when the ocean return probability from Bonneville back to Bonneville could be estimated (i.e., 1999 through 2003), it was estimated that on average approximately 86% of the total integrated mortality for nontransported, tagged hatchery spring and summer Chinook, and 74% for steelhead, occurred during the ocean life stage (i.e., from Bonneville to Bonneville). This suggests that additional monitoring and research efforts should include the ocean and estuary environment. Annual estimates of the systemwide T/I are weighted averages of the dam-specific T/I ratios for each transport dam (with {ge} 5,000 tagged fish transported), weighted by the probabilities of being transported at each dam. The systemwide T/I compares the observed SAR under the existing transportation system with the expected SAR if the transportation system had not been operated. Estimates of 1.0 indicate that the systemwide transportation program has no effect on SAR, while estimates > 1.0 indicate that the transportation program increases SAR. Excluding the 2001 release group, the geometric mean of the systemwide T/I estimates for hatchery spring Chinook salmon from the Snake River Basin was 1.15 (SE=0.03) for release years 1997 through 2003. The geometric mean of the systemwide T/I estimates for hatchery summer Chinook salmon from the Snake River Basin was 1.28 (SE=0.13) for release years 1997 through 2000 and 2003. Estimates were much higher for the 2001 release groups. These estimates reflect transportation from Lower Granite and/or Little Goose for most release years, depending on the number of tagged smolts actually transported at each dam during each release year. Differential post-Bonneville mortality (D) is the ratio of post-Bonneville survival to Lower Granite Dam of transported fish to that of nontransported ('inriver') fish. Excluding the 2001 release year, the geometric mean of the D estimates for hatchery spring Chinook salmon from the Snake River Basin

Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were collected at Threemile Dam from August 26, 1994 to June 27, 1995. A total of 1,531 summer steelhead (Oncorhynchus mykiss); 688 adult, 236 jack, and 368 subjack fallchinook (O. tshawvtscha); 984 adult and 62 jack coho (O. kisutch) ; and 388 adult and 108 jack spring chinook (O. tshawvtscha) were collected. All fish were trapped at the east bank facility. Of the fish collected, 971 summer steelhead; 581 adult and 27 jack fallchinook; 500 adult and 22 jack coho; and 363 adult and 61 jack spring chinook were hauled upstream from Threemile Dam. There were also 373 summer steelhead; 12 adult, 186 jack and 317 subjack fallchinook; 379 adult and 32 jack coho; and 15 adult and one jack spring chinook released at Threemile Dam. In addition, 154 summer steelhead were hauled to Bonifer and Minthorn for brood. The Westland Canal facility, located near the town of Echo, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The facility operated for a total of 179 days between December 2, 1994 and July 19, 1995. During that period, fish were bypassed back to the river 137 days and were trapped 42 days. Three steelhead kelts and an estimated 1,560 pounds of juvenile fish were transported from the Westland Canal trap to the Umatilla River boat ramp at rivermile 0.5. Approximately 98% of the fish transported this year were salmonids. The Threemile Dam west bank juvenile bypass began operating March 25, 1995 and was closed on June 16, 1995. The juvenile trap was operated by Oregon Department of Fish and Wildlife research personnel from April 1, 1995 through the summer to monitor juvenile outmigration.

Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were enumerated at Threemile Dam from June 7, 2007 to August 11, 2008. A total of 3,133 summer steelhead (Oncorhynchus mykiss); 1,487 adult, 1,067 jack, and 999 subjack fallChinook (O. tshawytscha); 5,140 adult and 150 jack coho (O. kisutch); and 2,009 adult, 517 jack, and 128 subjack spring Chinook (O. tshawytscha) were counted. All fish were enumerated at the east bank facility. Of the fish counted, 1,442 summer steelhead and 88 adult and 84 jack spring Chinook were hauled upstream from Threemile Dam. There were 1,497 summer steelhead; 609 adult, 1,018 jack and 979 subjack fallChinook; 5,036 adult and 144 jack coho; and 1,117 adult, 386 jack and 125 subjack spring Chinook either released at, or allowed to volitionally migrate past, Threemile Dam. Also, 110 summer steelhead; 878 adult and 43 jack fallChinook; and 560 adult and 28 jack spring Chinook were collected as broodstock for the Umatilla River hatchery program. In addition, there were 241 adult and 15 jack spring Chinook collected at Threemile Dam for outplanting in the South Fork Walla Walla River and Mill Cr, a tributary of the mainstem Walla Walla River. The Westland Canal juvenile facility (Westland), located near the town of Echo at river mile (RM) 27, is the major collection point for out-migrating juvenile salmonids and steelhead kelts. The canal was open for 158 days between February 11, 2008 and July 18, 2008. During that period, fish were bypassed back to the river 150 days and were trapped 6 days. There were also 2 days when fish were directed into and held in the canal forebay between the time the bypass was closed and the trap opened. An estimated 64 pounds of fish were transported from the Westland trapping facility. Approximately 25.8% of the fish transported were salmonids. In addition, one adult Pacific lamprey was trapped and released above the Westland ladder this year. The Threemile Dam west bank juvenile bypass was opened on March 11, 2008 in conjunction with water deliveries and continued through the summer. West Extension Irrigation District (WEID) discontinued diverting live flow on June 24, 2008 but the bypass remained open throughout the project year. The juvenile trap was not operated this project year.

We have documented two general life history strategies utilized by juvenile spring chinook salmon in the Grande Ronde River basin: (1) juveniles migrate downstream out of summer rearing areas in the fall, overwinter in river valley habitats, and begin their seaward migration in the spring, and (2) juveniles remain in summer rearing areas through the winter and begin seaward migration in the spring. In migration year 96-97, the patterns evident from migrant trap data were similar for the three Grande Ronde River populations studied, with 42% of the Lostine River migrants and 76% of the Catherine Creek migrants leaving upper rearing areas in the fall. Contrary to past years, the majority (98%) of upper Grande Ronde River migrants moved out in the fall. Total trap catch for the upper Grande Ronde River was exceedingly low (29 salmon), indicating that patterns seen this year may be equivocal. As in previous years, approximately 99% of chinook salmon juveniles moved past our trap at the lower end of the Grande Ronde River valley in the spring, reiterating that juvenile chinook salmon overwinter within the Grande Ronde valley section of the river. PIT-tagged fish were recaptured at Grande Ronde River traps and mainstem dams. Recapture data showed that fish that overwintered in valley habitats left as smolts and arrived at Lower Granite Dam earlier than fish that overwintered in upstream rearing areas. Fish from Catherine Creek that overwintered in valley habitats were recaptured at the dams at a higher rate than fish that overwintered upstream. In this first year of data for the Lostine River, fish tagged during the fall migration were detected at a similar rate to fish that overwintered upstream. Abundance estimates for migration year 96-97 were 70 for the upper Grande Ronde River, 4,316 for the Catherine Creek, and 4,323 for the Lostine River populations. Although present in most habitats, juvenile spring chinook salmon were found in the greatest abundance in pool habitats, particularly alcove and backwater pools. These results were consistent for both summer and winter surveys.

As part of the Idaho Supplementation Studies, fisheries crews from the Shoshone-Bannock Tribes have been snorkeling tributaries of the Salmon River to estimate chinook salmon (Oncorhynchus tshawytscha) parr abundance; conducting surveys of spawning adult chinook salmon to determine the number of redds constructed and collect carcass information; operating a rotary screw trap on the East Fork Salmon River and West Fork Yankee Fork Salmon River to enumerate and PIT-tag emigrating juvenile chinook salmon; and collecting and PIT-tagging juvenile chinook salmon on tributaries of the Salmon River. The Tribes work in the following six tributaries of the Salmon River: Bear Valley Creek, East Fork Salmon River, Herd Creek, South Fork Salmon River, Valley Creek, and West Fork Yankee Fork Salmon River. Snorkeling was used to obtain parr population estimates for ISS streams from 1992 to 1997. However, using the relatively vigorous methods described in the ISS experimental design to estimate summer chinook parr populations, results on a project-wide basis showed extraordinarily large confidence intervals and coefficients of variation. ISS cooperators modified their sampling design over a few years to reduce the variation around parr population estimates without success. Consequently, in 1998 snorkeling to obtain parr population estimates was discontinued and only General Parr Monitoring (GPM) sites are snorkeled. The number of redds observed in SBT-ISS streams has continued to decline as determined by five year cycles. Relatively weak strongholds continue to occur in the South Fork Salmon River and Bear Valley Creek. A rotary screw trap was operated on the West Fork Yankee Fork during the spring and fall of 1999 and the spring of 2000 to monitor juvenile chinook migration. A screw trap was also operated on the East Fork of the Salmon River during the spring and fall from 1993 to 1997 and 1999 (fall only) to 2000. Significant supplementation treatments have occurred in the South Fork Salmon River (IDFG). The East Fork Salmon River received supplementation treatments yearly through 1995. There have been no treatments since 1995, and no significant future treatments from local broodstock are conceivable due to extremely poor escapement. The West Fork Yankee Fork received a single presmolt treatment in 1994. Similarly, no significant future treatments are planned for the WFYF due to extremely poor escapement. However, small scale experimental captive rearing and broodstock techniques are currently being tested with populations from the EFSR and WFYF. Captive rearing/broodstock techniques could potentially provide feedback for evaluation of supplementation. The other three SBT-ISS streams are control streams and do not receive hatchery treatments.

Threemile Falls Dam is the major counting and collection point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were collected at Threemile Dam from October 23, 1992 to July 14, 1993. A total of 1,913 summer steelhead; 239 adult and 64 jack fallchinook; 355 adult and 174 jack coho; and 1,205 adult and 16 jack spring chinook were collected. Fish collected were hauled upstream from Threemile Dam using either a 370 or 3,000 gallon liberation unit. The Westland Canal facility, the major collection point for outmigrating juvenile salmonids and steelhead kelts was in operation from February 15 to July 29, 1993. During that period, fish were trapped 46 days. An estimated 3,228 pounds of fish were transported from the Westland Canal trap to the Umatilla River boat ramp at rivermile 0.5.

Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were enumerated at Threemile Dam from August 19, 2003 to July 8, 2004. A total of 3,388 summer steelhead (Oncorhynchus mykiss); 1,482 adult, 638 jack, and 2,150 subjack fallchinook (O. tshawytscha); 8,319 adult and 667 jack coho (O. kisutch); and 2,965 adult and 270 jack spring chinook (O. tshawytscha) were counted. All fish were enumerated at the east bank facility. Of the fish counted, 34 summer steelhead and 31 adult and 9 jack spring chinook were hauled upstream from Threemile Dam. There were 3,166 summer steelhead; 1,076 adult, 554 jack and 2,026 subjack fallchinook; 8,213 adult and 647 jack coho; and 2,152 adult and 174 jack spring chinook either released at, or allowed to volitionally migrate past, Threemile Dam. Also, 121 summer steelhead; 388 adult and 19 jack fallchinook; and 561 adult and 29 jack spring chinook were collected for brood. In addition, 239 spring chinook were collected for the outplanting efforts in the Walla Walla Basin. There were also 25 pair hatchery steelhead adults collected for the progeny maker study. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The canal was open for 184 days between January 12 and July 6, 2004. During that period, fish were bypassed back to the river 173 days and were trapped 10 days. An estimated 44 pounds of juvenile fish were transported from Westland to the Umatilla River boat ramp (RM 0.5). Approximately 84% of the juveniles transported were salmonids. No steelhead kelts were hauled from Westland this year. The Threemile Dam west bank juvenile bypass was opened on February 10, 2004 for outmigration sampling and continued until July 7, 2004 when sampling was discontinued. The juvenile bypass ran at the 5 cfs level until the initiation of Phase I on August 15, 2004. The juvenile trap was operated by the Oregon Department of Fish and Wildlife (ODFW) under the Evaluation of Umatilla Juvenile Salmonid Outmigration Project.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

Note: This page contains sample records for the topic "river fall chinook" from the National Library of EnergyBeta (NLEBeta).
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they are not comprehensive nor are they the most current set.
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Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were enumerated at Threemile Dam from August 17, 2002 to September 29, 2003. A total of 3,080 summer steelhead (Oncorhynchus mykiss); 1716 adult, 617 jack, and 1,709 subjack fallchinook (O. tshawytscha); 3,820 adult and 971 jack coho (O. kisutch); and 3,607 adult and 135 jack spring chinook (O. tshawytscha) were counted. All fish were enumerated at the east bank facility. Of the fish counted, 6 summer steelhead and 330 adult and 49 jack spring chinook were hauled upstream from Threemile Dam. There were 2,882 summer steelhead; 1161 adult, 509 jack and 1,546 subjack fallchinook; 3,704 adult and 915 jack coho; and 2,406 adult and 31 jack spring chinook either released at, or allowed to volitionally migrate past, Threemile Dam. Also, 109 summer steelhead; 532 adult and 32 jack fallchinook; and 560 adult and 28 jack spring chinook were collected for brood. In addition, 282 spring chinook were collected for the outplanting efforts in the Walla Walla Basin. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The canal was open for 159 days between January 27 and July 4, 2003. During that period, fish were bypassed back to the river 145 days and were trapped 11 days. An estimated 205 pounds of juvenile fish were transported from Westland to the Umatilla River boat ramp (RM 0.5). Approximately 82% of the juveniles transported were salmonids. No steelhead kelts were hauled from Westland this year. The Threemile Dam west bank juvenile bypass was opened on September 16, 2002. and continued until November 1, 2002. The bypass was reopened March 3, 2003 and ran until July 3, 2003. The juvenile trap was operated by the Umatilla Passage Evaluation Project.

of the state of Washington's effort to identify larger groups of populations (or stocks), Busack and Marshall, Edson 1958), just as they are irregularly distributed now in the Hanford Reach (Swan et al. 1988 from the Hanford Reach and downstream from Chief Joseph Dam except in the Okanogan River. Summer

Smolt transportation on the Snake and Columbia Rivers has been under nearly continuous study for 25 years. Most controversy surrounds transport of spring/summer chinook, so most analyses and discussion are devoted to that species. Sockeye migrate at the same time as spring/summer chinook as do the earliest of the fallchinook. Therefore, action taken o spring/summer chinook will also affect sockeye and fallchinook. Many factors influenced transportation study results including population structure change -- the shift from nearly all wild fish to nearly all hatchery fish; new dams; the number of turbines at Snake River dams alone increased from 3 in 1968 to 24 by 1979; installation of juvenile fish pass facilities; and calamitous natural events such as the 1977 drought. All the above had negative effects on the survival of wild fish in general and on transport test results specifically, except that when smolts were transported from the upper dam their survival was not influenced by new or existing structures downstream from the transport site.

From 2002 through 2006 we investigated historical and contemporary variations in juvenile Chinook salmon Oncorhynchus tshawytscha life histories, habitat associations, and food webs in the lower Columbia River estuary (mouth to rkm 101). At near-shore beach-seining sites in the estuary, Chinook salmon occurred during all months of the year, increasing in abundance from January through late spring or early summer and declining rapidly after July. Recently emerged fry dispersed throughout the estuary in early spring, and fry migrants were abundant in the estuary until April or May each year. Each spring, mean salmon size increased from the tidal freshwater zone to the estuary mouth; this trend may reflect estuarine growth and continued entry of smaller individuals from upriver. Most juvenile Chinook salmon in the mainstem estuary fed actively on adult insects and epibenthic amphipods Americorophium spp. Estimated growth rates of juvenile Chinook salmon derived from otolith analysis averaged 0.5 mm d-1, comparable to rates reported for juvenile salmon Oncorhynchus spp. in other Northwest estuaries. Estuarine salmon collections were composed of representatives from a diversity of evolutionarily significant units (ESUs) from the lower and upper Columbia Basin. Genetic stock groups in the estuary exhibited distinct seasonal and temporal abundance patterns, including a consistent peak in the Spring Creek FallChinook group in May, followed by a peak in the Western Cascades FallChinook group in July. The structure of acanthocephalan parasite assemblages in juvenile Chinook salmon from the tidal freshwater zone exhibited a consistent transition in June. This may have reflected changes in stock composition and associated habitat use and feeding histories. From March through July, subyearling Chinook salmon were among the most abundant species in all wetland habitat types (emergent, forested, and scrub/shrub) surveyed in the lower 100 km of the estuary. Salmon densities within wetland habitats fell to low levels by July, similar to the pattern observed at mainstem beach-seining sites and coincident with high water temperatures that approached or exceeded 19 C by mid-summer. Wetland habitats were used primarily by small subyearling Chinook salmon, with the smallest size ranges (i.e., rarely exceeding 70 mm by the end of the wetland rearing season) at scrub/shrub forested sites above rkm 50. Wetland sites of all types were utilized by a diversity of genetic stock groups, including less abundant groups such as Interior Summer/FallChinook.

Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were enumerated at Threemile Dam from August 17, 2000 to July 7, 2001. A total of 3,662 summer steelhead (Oncorhynchus mykiss); 643 adult, 437 jack, and 4,948 subjack fallchinook (O. tshawytscha); 4,654 adult and 1,276 jack coho (O. kisutch); and 4,382 adult and 185 jack spring chinook (O. tshawytscha) were counted. All fish were enumerated at the east bank facility. Of the fish counted, 14 summer steelhead and 847 adult and 74 jack spring chinook were hauled upstream from Threemile Dam. There were 3,433 summer steelhead; 71 adult, 298 jack and 4,647 subjack fallchinook; 4,435 adult and 1,180 jack coho; and 2,873 adult and 55 jack spring chinook either released at, or allowed to volitionally migrate past, Threemile Dam. In addition, 116 summer steelhead; 565 adult and 38 jack fallchinook; and 646 adult and 31 jack spring chinook were collected for brood. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The canal was open for 147 days between February 5 and July 26, 2001. During that period, fish were bypassed back to the river 127 days and were trapped 18 days. An estimated 350 pounds of juvenile fish were transported from Westland to the Umatilla River boat ramp (RM 0.5). Approximately 92% of the juveniles transported were salmonids. No steelhead kelts were hauled from Westland this year. The Threemile Dam west bank juvenile bypass was open throughout the summer of 2000 and continued to run until October 27, 2000. The bypass was reopened March 8, 2001 and ran until July 9, 2001. The juvenile trap was not operated this year.

In March 1992, the US Army Corps of Engineers initiated a test to help evaluate physical and environmental impacts resulting from the proposed future drawdown of Snake River reservoirs. Drawdown would reduce water levels in Snake River reservoirs and is being proposed as a solution to decrease the time it takes for salmon and steelhead smolts to migrate to the ocean. The Pacific Northwest Laboratory evaluated impacts to specific fisheries resources during the drawdown experiment by surveying Lower Granite Reservoir to determine if fallchinook salmon (Oncorhynchus tshawytscha) spawning areas and steelhead (0. mykiss) access to tributary creeks were affected. In addition, shoreline areas of Little Goose Reservoir were monitored to evaluate the suitability of these areas for spawning by fallchinook salmon. Relative abundance of fish species in nearshore areas was also determined during the drawdown, and stranded resident fish and other aquatic organisms were observed.

Effects of oceanographic conditions, as well as effects of release-timing and release-size, on first ocean-year survival of subyearling fallchinook salmon were investigated by analyzing CWT release and recovery data from Oregon and Washington coastal hatcheries. Age-class strength was estimated using a multinomial probability likelihood which estimated first-year survival as a proportional hazards regression against ocean and release covariates. Weight-at-release and release-month were found to significantly effect first year survival (p < 0.05) and ocean effects were therefore estimated after adjusting for weight-at-release. Negative survival trend was modeled for sea surface temperature (SST) during 11 months of the year over the study period (1970-1992). Statistically significant negative survival trends (p < 0.05) were found for SST during April, June, November and December. Strong pairwise correlations (r > 0.6) between SST in April/June, April/November and April/December suggest the significant relationships were due to one underlying process. At higher latitudes (45{sup o} and 48{sup o}N), summer upwelling (June-August) showed positive survival trend with survival and fall (September-November) downwelling showed positive trend with survival, indicating early fall transition improved survival. At 45{sup o} and 48{sup o}, during spring, alternating survival trends with upwelling were observed between March and May, with negative trend occurring in March and May, and positive trend with survival occurring in April. In January, two distinct scenarios of improved survival were linked to upwelling conditions, indicated by (1) a significant linear model effect (p < 0.05) showing improved survival with increasing upwelling, and (2) significant bowl-shaped curvature (p < 0.05) of survival with upwelling. The interpretation of the effects is that there was (1) significantly improved survival when downwelling conditions shifted to upwelling conditions in January (i.e., early spring transition occurred, p < 0.05), (2) improved survival during strong downwelling conditions (Bakun units < -250). Survival decreased during weak downwelling conditions (Bakun units between -180 and -100). Strong to moderately strong correlations between January upwelling and April SST (r = 0.5), June SST (r = 0.6), and the North Pacific Index (NPI) of Aleutian Low strength (r > 0.7) suggest January is a period when important effects originate and play out over ensuing months. Significant inverse trend with survival (p < 0.05) was found for Bakun indices in December, indicating strong downwelling improved survival. Higher-than-average adult return rates were observed for cohorts from brood-years 1982-1983, strong El Nino years. Individual hatcheries were found to have unique age-class strength and age-at-return characteristics.

Reproductive success in wild- and first generation hatchery-origin spring Chinook males was examined by allowing the fish to compete for spawning opportunities in two sections of an observation stream. Behavioral observations were used to characterize the frequency of aggression and courting activities. Microsatellite DNA from each male and fry collected from the observation stream were used in pedigree analyses to estimate reproductive success. The coefficient of variation in male reproductive success equaled 116 and 86% in the two populations. No differences were detected in reproductive success due to hatchery or wild origin. Nor were any behavioral differences found between hatchery and wild males. Although statistical power was low due to intrinsic variation a great deal of overlap existed in the reproductive success values of hatchery and wild males. Significant disparities existed among the males on their ability to produce offspring. Males achieving high reproductive success mated with numerous females, were socially dominant, aggressive, and tended to stay in localized areas, courting and spawning with females that were adjacent to one another.

Spawning habitat in the Deschutes River was inventoried, gravel permeability and composition were sampled at selected gravel bars, historical flow records for the Deschutes were analyzed, salmon and trout utilization of spawning habitat was examined, and potential methods of enhancing spawning habitat in the river were explored. Some changes in river conditions since the mid-1960's were identified, including a reduction in spawning habitat immediately downstream from the hydroelectric complex. The 1964 flood was identified as a factor which profoundly affected spawning habitat in the river, and which greatly complicated efforts to identify recent changes which could be attributed to the hydrocomplex. A baseline on present gravel quality at both chinook and steelhead spawning areas in the river was established using a freeze-core methodology. Recommendations are made for enhancing spawning habitat in the Deschutes River, if it is independently determined that spawning habitat is presently limiting populations of summer steelhead or fallchinook in the river. 53 refs., 40 figs., 21 tabs.

Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, Oregon is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were enumerated at Threemile Dam from August 22, 2001 to September 12, 2002. A total of 5,519 summer steelhead (Oncorhynchus mykiss); 1,146 adult, 1,158 jack, and 970 subjack fallchinook (O. tshawytscha); 22,792 adult and 80 jack coho (O. kisutch); and 5,058 adult and 188 jack spring chinook (O. tshawytscha) were counted. All fish were enumerated at the east bank facility. Of the fish counted, 261 adult and 14 jack spring chinook were hauled upstream from Threemile Dam for release. There were 5,359 summer steelhead; 622 adult, 1,041 jack and 867 subjack fallchinook; 22,513 adult and 76 jack coho; and 4,061 adult and 123 jack spring chinook either released at, or allowed to volitionally migrate past, Threemile Dam. In addition, 110 summer steelhead; 462 adult and 24 jack fallchinook; and 560 adult and 28 jack spring chinook were collected for brood. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The canal was open for 141 days between February 22 and July 12, 2002. During that period, fish were bypassed back to the river 134 days and were trapped 5 days. An estimated 200 pounds of juvenile fish were transported from Westland. Approximately 90% of the juveniles transported were salmonids. No steelhead kelts were hauled from Westland this year. The Threemile Dam west bank juvenile bypass was opened August 16, 2002. The bypass was run until October 31, 2001 with the exception of the period from August 29 to September 16. The bypass was reopened March 7, 2002 and ran until July 8. The juvenile trap was operated from July 8 to July 12 by the Umatilla Passage Evaluation project.

Since FY 2000, scientists at Pacific Northwest National Laboratory (PNNL) have conducted research to assess the extent of spawning by chum (Oncorhynchus keta) and fallChinook (O. tshawytscha) salmon in the lower mainstem Columbia River. Their work supports a larger Bonneville Power Administration (BPA) project aimed at characterizing the physical habitat used by mainstem fallChinook and chum salmon populations. Multiple collaborators in addition to PNNL are involved in the BPA project--counterparts include the Washington Department of Fish and Wildlife (WDFW), U.S. Fish and Wildlife Service (USFWS), Pacific States Marine Fisheries Commission (PSMFC), U.S. Geological Survey (USGS), and Oregon Department of Fish and Wildlife (ODFW). Data resulting from the individual tasks each agency conducts are providing a sound scientific basis for developing strategies to operate the Federal Columbia River Power System (FCRPS) in ways that will effectively protect and enhance the chum and fallChinook salmon populations--both listed as threatened under the Endangered Species Act. FallChinook salmon, thought to originate from Bonneville Hatchery, were first noted to be spawning downstream of Bonneville Dam by biologists from the WDFW in 1993. Known spawning areas include gravel beds on the Washington side of the river near Hamilton Creek and Ives Island. Limited spawning ground surveys were conducted in the area around Ives and Pierce islands during 1994 through 1997. Based on these surveys, fallChinook salmon were believed to be spawning successfully in this area. In addition, chum salmon have been documented spawning downstream of Bonneville Dam. In FY 1999, BPA Project No. 1999-003 was initiated by the WDFW, ODFW, and the USFWS to characterize the variables associated with physical habitat used by mainstem fallChinook and chum salmon populations and to better understand the effects of hydropower project operations on spawning and incubation. Pacific Northwest National Laboratory was asked to join the study in FY 2000, during which its initial efforts were focused on (1) investigating the interactions between groundwater and surface water near fallChinook and chum salmon spawning areas and (2) locating and mapping deepwater fallChinook salmon spawning areas. In FY 2001, an additional task was added to provide support to the WDFW for analysis of juvenile salmon stranding data. The work PNNL has conducted since then continues to address these same three issues. The overall project is subdivided into a series of tasks, with each agency taking the lead on a task; WDFW leads the adult task, ODFW leads the juvenile task, and the USFWS leads the habitat task. All three tasks are designed to complement each other to achieve the overall project goal. Study results from PNNL's work contribute to all three tasks. This report documents the studies and tasks performed by PNNL during FY 2005. Chapter 1 provides a description of the deepwater redd searches conducted adjacent to Pierce and Ives islands and documents the search results and analysis of findings. Chapter 2 documents the collection of data on riverbed and river temperatures, from the onset of spawning to the end of emergence, and the provision of those data in-season to fisheries management agencies to assist with emergence timing estimates. Technical assistance provided to the WDFW in evaluation of stranding data is summarized in Chapter 3.

The Umatilla habitat improvement program targets the improvement of water quality and restoration of riparian areas, holding, spawning,and rearing habitats of steelhead, spring and fallChinook and coho salmon. This report covers work accomplished by the Confederated Tribes of the Umatilla Indian Reservation from April 1991 through May 1992. This program is funded under the Northwest Power Planning Council's Columbia River Basin Fish and Wildlife Program (Measure 704 (d)(1) 34.02) as partial mitigation for construction of hydroelectric dams and the subsequent losses of anadromous fish throughout the Columbia River system.

Spawning habitat in the Deschutes River was inventoried, gravel permeability and composition were sampled at selected gravel bars, historical flow records for the Deschutes were analyzed, salmon and trout utilization of spawning habitat was examined, and potential methods of enhancing spawning habitat in the river were explored. Some changes in river conditions since the mid-1960's were identified, including a reduction in spawning habitat immediately downstream from the hydroelectric complex. The 1964 flood was identified as a factor which profoundly affected spawning habitat in the river, and which greatly complicated efforts to identify recent changes which could be attributed to the hydrocomplex. A baseline on present gravel quality at both chinook and steelhead spawning areas in the river was established using a freeze-core methodology. Recommendations are made for enhancing spawning habitat in the Deschutes River, if it is independently determined that spawning habitat is presently limiting populations of summer steelhead or fallchinook in the river. Volume II contains appendices to the study.

This paper is an investigation into possible relationships between landscape habitat characteristics and density categories of steelhead and spring/summer chinook parr within index streams in the Snake River drainage in Idaho.

Following a change in the factors that determine landscape form, a transient signal of adjustment propagates through the river network, progressively adjusting channels and hillslopes to the new conditions. When conditions ...

Information contained in this report summarizes the work that has been done by the Shoshone-Bannock Tribes Fisheries Department under BPA Project No. 89-098-3, Contract Number 92-BI-49450. Relevant data generated by the Shoshone-Bannock Tribe will be collated with other ISS cooperator data collected from the Salmon and Clearwater rivers and tributary streams. A summary of data presented in this report and an initial project-wide level supplementation evaluation will be available in the ISS 5 year report that is currently in progress. The Shoshone-Bannock Tribal Fisheries Department is responsible for monitoring a variety of chinook salmon (Oncorhynchus tshawytscha) production parameters as part of the Idaho Supplementation Studies (BPA Project No. 89-098-3, Contract Number 92-BI-49450). Parameters include parr abundance in tributaries to the upper Salmon River; adult chinook salmon spawner abundance, redd counts, and carcass collection. A rotary screw trap is operated on the East Fork Salmon River and West Fork Yankee Fork Salmon River to enumerate and PIT-tag chinook smolts. These traps are also used to monitor parr movement, and collect individuals for the State and Tribal chinook salmon captive rearing program. The SBT monitors fisheries parameters in the following six tributaries of the Salmon River: Bear Valley Creek, East Fork Salmon River, Herd Creek, South Fork Salmon River, Valley Creek, and West Fork Yankee Fork. Chinook populations in all SBT-ISS monitored streams continue to decline. The South Fork Salmon River and Bear Valley Creek have the strongest remaining populations. Snorkel survey methodology was used to obtain parr population estimates for ISS streams from 1992 to 1997. Confidence intervals for the parr population estimates were large, especially when the populations were low. In 1998, based on ISS cooperator agreement, snorkeling to obtain parr population estimates was ceased due to the large confidence intervals. A rotary screw trap was operated on the West Fork Yankee Fork during the spring, summer, and fall of 1998 to monitor juvenile chinook migration. A screw trap was also operated on the East Fork of the Salmon River during the spring and fall from 1993 to 1997. Supplementation treatments have occurred on the South Fork Salmon River (IDFG), the East Fork Salmon River (EFSR), and the West Fork Yankee Fork of the Salmon River (WFYF). The EFSR received supplementation treatments yearly through 1995. There have been no treatments since 1995, and no significant future treatments from local broodstock are planned due to extremely poor escapement. The WFYF received a single presmolt treatment in 1994. There was an egg and adult release treatment in 1998 from the captive rearing program, not part of the original ISS study. Similarly, no significant future treatments are planned for the West Fork Yankee Fork due to extremely poor escapement. However, small scale experimental captive rearing and broodstock techniques are currently being tested with populations from the EFSR and WFYF. Captive rearing/broodstock techniques could potentially provide feedback for evaluation of supplementation. The other three SBT-ISS streams are control streams and do not receive supplementation treatments.

Bonneville Power Administration (BPA) is preparing an EIS to analyze the potential environmental impacts of funding a proposal by the Confederated Tribes of the Umatilla Indian Reservation to construct and operate a hatchery for spring Chinook salmon in the Walla Walla River basin.

The National Marine Fisheries Service (NMFS) listed Lower Columbia River (LCR) chum salmon as threatened under the Endangered Species Act (ESA) in March, 1999 (64 FR 14508, March 25, 1999). The listing was in response to the reduction in abundance from historical levels of more than one-half million returning adults to fewer than 10,000 present-day spawners. Harvest, habitat degradation, changes in flow regimes, riverbed movement and heavy siltation have been largely responsible for this decline. The timing of seasonal changes in river flow and water temperatures is perhaps the most critical factor in structuring the freshwater life history of this species. This is especially true of the population located directly below Bonneville Dam, where hydropower operations can block access to spawning sites, dewater redds, strand fry, cause scour or fill of redds and increase sedimentation of spawning gravels. Prior to 1997, only two chum salmon populations were recognized as genetically distinct in the Columbia River, although spawning had been documented in many Lower Columbia River tributaries. The first population was in the Grays River (RKm 34), a tributary of the Columbia River, and the second was a group of spawners utilizing the mainstem Columbia River just below Bonneville Dam (RKm 235) adjacent to Ives Island and in Hardy and Hamilton creeks. Using additional DNA samples, Small et al. (2006) grouped chum salmon spawning in the mainstem Columbia River and the Washington State tributaries into three groups: the Coastal, the Cascade and the Gorge. The Coastal group comprises those spawning in the Grays River, Skamokawa Creek and the broodstock used at the Sea Resources facility on the ChinookRiver. The Cascade group comprises those spawning in the Cowlitz (both summer and fall stocks), Kalama, Lewis, and East Fork Lewis rivers, with most supporting unique populations. The Gorge group comprises those spawning in the mainstem Columbia River from the I-205 Bridge up to Bonneville Dam and those spawning in Hamilton and Hardy creeks. Response to the federal ESA listing has been primarily through direct-recovery actions: reducing harvest, hatchery supplementation using local broodstock for populations at catastrophic risk, habitat restoration (including construction of spawning channels) and flow agreements to protect spawning and rearing areas. Both state and federal agencies have built controlled spawning areas. In 1998, the Washington Department of Fish and Wildlife (WDFW) began a chum salmon supplementation program using native stock on the Grays River. This program was expanded during 1999 - 2001 to include reintroduction into the ChinookRiver using eggs from the Grays River Supplementation Program. These eggs are incubated at the Grays River Hatchery, reared to release size at the Sea Resources Hatchery on the ChinookRiver, and the fry are released at the mouth of the ChinookRiver. Native steelhead, chum, and coho salmon are present in Duncan Creek, and are recognized as subpopulations of the Lower Gorge population, and are focal species in the Lower Columbia Fish Recovery Board (LCFRB) plan. Steelhead, chum and coho salmon that spawn in Duncan Creek are listed as Threatened under the ESA. Duncan Creek is classified by the LCFRB plan as a watershed for intensive monitoring (LCFRB 2004). This project was identified in the 2004 Federal Columbia River Power System (FCRPS) revised Biological Opinion (revised BiOp) to increase survival of chum salmon, 'BPA will continue to fund the program to re-introduce Columbia River chum salmon into Duncan Creek as long as NOAA Fisheries determines it to be an essential and effective contribution to reducing the risk of extinction for this ESU'. (USACE et al. 2004, page 85-86). The Governors Forum on Monitoring and Salmon Recovery and Watershed Health recommends one major population from each ESU have adult and juvenile monitoring. Duncan Creek chum salmon are identified in this plan to be intensively monitored. Planners recommended that a combination of natural and hatchery production

The study estimated dam passage survival at The Dalles Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and provided additional performance measures as stipulated in the Columbia Basin Fish Accords. This summary report focuses on spring run stocks, yearling Chinook salmon and steelhead.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

Note: This page contains sample records for the topic "river fall chinook" from the National Library of EnergyBeta (NLEBeta).
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they are not comprehensive nor are they the most current set.
We encourage you to perform a real-time search of NLEBeta
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The study estimated dam passage survival at The Dalles Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and provided additional performance measures as stipulated in the Columbia Basin Fish Accords. This summary report focuses on spring run stocks, yearling Chinook salmon and steelhead.

The upper Cowlitz was once home to native salmon and steelhead. But the combined impacts of overharvest, farming, logging and road building hammered fish runs. And in the 1960s, a pair of hydroelectric dams blocked the migration path of ocean-returning and ocean-going fish. The lower Cowlitz still supports hatchery runs of chinook, coho and steelhead. But some 200 river miles in the upper river basin--much of it prime spawning and rearing habitat--have been virtually cut off from the ocean for over 26 years. Now the idea is to trap-and-haul salmon and steelhead both ways and bypass previously impassable obstacles in the path of anadromous fish. The plan can be summarized, for the sake of explanation, in three steps: (1) trap and haul adult fish--collect ocean-returning adult fish at the lowermost Cowlitz dam, and truck them upstream; (2) reseed--release the ripe adults above the uppermost dam, and let them spawn naturally, at the same time, supplement these runs with hatchery born fry that are reared and imprinted in ponds and net pens in the watershed; (3) trap and haul smolts--collection the new generation of young fish as they arrive at the uppermost Cowlitz dam, truck them past the three dams, and release them to continue their downstream migration to the sea. The critical part of any fish-collection system is the method of fish attraction. Scientists have to find the best combination of attraction system and screens that will guide young fish to the right spot, away from the turbine intakes. In the spring of 1994 a test was made of a prototype system of baffles and slots on the upriver face of the Cowlitz Falls Dam. The prototype worked at 90% efficiency in early tests, and it worked without the kind of expensive screening devices that have been installed on other dams. Now that the success of the attraction system has been verified, Harza engineers and consultants will design and build the appropriate collection part of the system.

The purpose of this compliance study was to estimate dam passage survival of subyearling Chinook salmon at Bonneville Dam during summer 2012, as required by the 2008 Federal Columbia River Power System Biological Opinion. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailrace 1 km below the dam, as well as forebay residence time, tailrace egress, and spill passage efficiency, as required in the 2008 Columbia Basin Fish Accords.

(Hanford Reach fallchinook), this plan7 provides an emphasis on protecting and restoring mainstem spawning7 steelhead in the mainstem. This includes, among other things, protecting the8 Hanford Reach fall" while the Council works with the region to determine the most biologically effective level of spillway

The Grays River Watershed and Biological Assessment was funded to address degradation and loss of spawning habitat for chum salmon (Onchorhynchus keta) and fallChinook salmon (Onchoryhnchus tshawytscha). In 1999, the National Marine Fisheries Service listed lower Columbia River chum salmon as a threatened Evolutionarily Significant Unit (ESU) under the Endangered Species Act of 1973 (ESA). The Grays River watershed is one of two remaining significant chum salmon spawning locations in this ESU. Runs of Grays River chum and Chinook salmon have declined significantly during the past century, largely because of damage to spawning habitat associated with timber harvest and agriculture in the watershed. In addition, approximately 20-25% of the then-remaining chum salmon spawning habitat was lost during a 1999 channel avulsion that destroyed an important artificial spawning channel operated by the Washington Department of Fish and Wildlife (WDFW). Although the lack of stable, high-quality spawning habitat is considered the primary physical limitation on Grays River chum salmon production today, few data are available to guide watershed management and channel restoration activities. The objectives of the Grays River Watershed and Biological Assessment project were to (1) perform a comprehensive watershed and biological analysis, including hydrologic, geomorphic, and ecological assessments; (2) develop a prioritized list of actions that protect and restore critical chum and Chinook salmon spawning habitat in the Grays River based on comprehensive geomorphic, hydrologic, and stream channel assessments; and (3) gain a better understanding of chum and Chinook salmon habitat requirements and survival within the lower Columbia River and the Grays River. The watershed-based approach to river ecosystem restoration relies on a conceptual framework that describes general relationships between natural landscape characteristics, watershed-scale habitat-forming processes, aquatic habitat conditions, and biological integrity. In addition, human land-use impacts are factored into the conceptual model because they can alter habitat quality and can disrupt natural habitat-forming processes. In this model (Figure S.1), aquatic habitat--both instream and riparian--is viewed as the link between watershed conditions and biologic responses. Based on this conceptual model, assessment of habitat loss and the resultant declines in salmonid populations can be conducted by relating current and historical (e.g., natural) habitat conditions to salmonid utilization, diversity, and abundance. In addition, assessing disrupted ecosystem functions and processes within the watershed can aid in identifying the causes of habitat change and the associated decline in biological integrity. In this same way, restoration, enhancement, and conservation projects can be identified and prioritized. A watershed assessment is primarily a landscape-scale evaluation of current watershed conditions and the associated hydrogeomorphic riverine processes. The watershed assessment conducted for this project focused on watershed processes that form and maintain salmonid habitat. Landscape metrics describing the level of human alteration of natural ecosystem attributes were used as indicators of water quality, hydrology, channel geomorphology, instream habitat, and biotic integrity. Ecological (watershed) processes are related to and can be predicted based on specific aspects of spatial pattern. This study evaluated the hydrologic regime, sediment delivery regime, and riparian condition of the sub-watersheds that comprise the upper Grays River watershed relative to their natural range of conditions. Analyses relied primarily on available geographic information system (GIS) data describing landscape characteristics such as climate, vegetation type and maturity, geology and soils, topography, land use, and road density. In addition to watershed-scale landscape characteristics, the study area was also evaluated on the riparian scale, with appropriate landscape variables analyzed within

The Grays River Watershed and Biological Assessment was funded to address degradation and loss of spawning habitat for chum salmon (Onchorhynchus keta) and fallChinook salmon (Onchoryhnchus tshawytscha). In 1999, the National Marine Fisheries Service listed lower Columbia River chum salmon as a threatened Evolutionarily Significant Unit (ESU) under the Endangered Species Act of 1973 (ESA). The Grays River watershed is one of two remaining significant chum salmon spawning locations in this ESU. Runs of Grays River chum and Chinook salmon have declined significantly during the past century, largely because of damage to spawning habitat associated with timber harvest and agriculture in the watershed. In addition, approximately 20-25% of the then-remaining chum salmon spawning habitat was lost during a 1999 channel avulsion that destroyed an important artificial spawning channel operated by the Washington Department of Fish and Wildlife (WDFW). Although the lack of stable, high-quality spawning habitat is considered the primary physical limitation on Grays River chum salmon production today, few data are available to guide watershed management and channel restoration activities. The objectives of the Grays River Watershed and Biological Assessment project were to (1) perform a comprehensive watershed and biological analysis, including hydrologic, geomorphic, and ecological assessments; (2) develop a prioritized list of actions that protect and restore critical chum and Chinook salmon spawning habitat in the Grays River based on comprehensive geomorphic, hydrologic, and stream channel assessments; and (3) gain a better understanding of chum and Chinook salmon habitat requirements and survival within the lower Columbia River and the Grays River. The watershed-based approach to river ecosystem restoration relies on a conceptual framework that describes general relationships between natural landscape characteristics, watershed-scale habitat-forming processes, aquatic habitat conditions, and biological integrity. In addition, human land-use impacts are factored into the conceptual model because they can alter habitat quality and can disrupt natural habitat forming processes. In this model (Figure S.1), aquatic habitat--both instream and riparian--is viewed as the link between watershed conditions and biologic responses. Based on this conceptual model, assessment of habitat loss and the resultant declines in salmonid populations can be conducted by relating current and historical (e.g., natural) habitat conditions to salmonid utilization, diversity, and abundance. In addition, assessing disrupted ecosystem functions and processes within the watershed can aid in identifying the causes of habitat change and the associated decline in biological integrity. In this same way, restoration, enhancement, and conservation projects can be identified and prioritized. A watershed assessment is primarily a landscape-scale evaluation of current watershed conditions and the associated hydrogeomorphic riverine processes. The watershed assessment conducted for this project focused on watershed processes that form and maintain salmonid habitat. Landscape metrics describing the level of human alteration of natural ecosystem attributes were used as indicators of water quality, hydrology, channel geomorphology, instream habitat, and biotic integrity. Ecological (watershed) processes are related to and can be predicted based on specific aspects of spatial pattern. This study evaluated the hydrologic regime, sediment delivery regime, and riparian condition of the sub-watersheds that comprise the upper Grays River watershed relative to their natural range of conditions. Analyses relied primarily on available geographic information system (GIS) data describing landscape characteristics such as climate, vegetation type and maturity, geology and soils, topography, land use, and road density. In addition to watershed-scale landscape characteristics, the study area was also evaluated on the riparian scale, with appropriate landscape variables analyzed within

The Collawash Falls Fish Passage Project began in August of 1987, and resulted in completion of Phase I of the construction of the fish passage facility. A core team of Forest Service personnel. led by fish passage specialists from R-10, Alaska, excavated a trench in the bedrock face of the falls that is approximately 95 feet long, 8 feet deep and 10 feet wide. Implementation of Phase II of the project was put on hold in July of 1988. when 50 yards of rock from the adjacent headwall sloughed into the trench. During September and October of 1988 the larger rocks were reduced in size by blasting. High water flows in November moved the blasted rock from the trench. The project is being done by the Mt. Hood National Forest with funds supplied by the Bonneville Power Administration (BPA) under the NWPPC's Fish and Wildlife Program, Measure 703(c). Action Item 4.2, in consultation with the Oregon Department of Fish and Wildlife (ODF&W). Successful modification of the Collawash Falls will allow anadromous fish full access to over 10 miles of acknowledged high quality spawning and rearing habitat. The total anadromous fish production benefits gained from utilization of this habitat, assuming a 10 year project life with a 4% discount factor is $1,690,019.00. In 1974, several partial barriers to anadromous fish in the form of small falls and cataracts located immediately above the trench, were modified for full passage by blasting. This work conducted by the Forest Service was fully successful in allowing fish passage through all but the main barrier in Collawash Falls. Other Collawash River fisheries projects include the 1984 construction of a fish liberation access site above the falls for the PGE/ODFW spring chinook trap and haul program. Funding for the project came from revenues generated by an adjacent Forest Service timber sale. In summer of 1985, 30,000 spring chinook presmolts were stocked at this liberation site. In spring of 1987. 10,000 coho pre-smolts were stocked above the falls in the first of a three-year program to increase the runs of native winter run coho to the Collawash River system.

This annual report covers the period from January 1, 2006 through December 31, 2006. Work completed supports the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) effort to restore a locally-adapted stock of spring Chinook to the Umatilla River Basin. During the year, staff at the Little White Salmon/Willard National Fish Hatchery Complex have completed the rearing of 218,764 Brood Year 2004 spring Chinook salmon for release into the Umatilla River during spring 2006 and initiated production of approximately 220,000 Brood Year 2005 spring Chinook for transfer and release into the Umatilla River during spring 2007. All work under this contract is performed at the Little White Salmon and Willard National Fish Hatcheries (NFH), Cook, WA.

To mitigate for fish losses related to passage through the Federal Columbia River Power System, an extensive fish transportation program using barges and trucks to move fish around and downstream of dams and reservoirs was implemented in 1981. Population modeling and other analyses to support Pacific salmon recovery efforts have assumed that the survival of juvenile salmonids during the transportation experience was 98%. To estimate survival during barge transport from Lower Granite Dam on the Snake River to a release area downstream of Bonneville Dam, a distance of 470 km, we used a novel adaptation of a release-recapture model with acoustic-tagged yearling Chinook salmon (Oncorhynchus tshawytscha) smolts. A total of 1,494 yearling Chinook salmon were surgically implanted with Juvenile Salmon Acoustic Telemetry System (JSATS) acoustic transmitters and passive integrated transponders (PIT) and divided into three groups. The three tagged groups consisted of; (1) a group which was released into the raceway with the population of fish which were later loaded into transportation barges (R{sub B}), (2) a group which was held in a net-pen suspended within the general barge population until 5-6 h prior to barge evacuation, at which time they were confirmed to be alive and then released into the general barge population (R{sub A}), and (3) to validate a model assumption, a group which was euthanized and released into the barge population 2-8 h prior to barge evacuation (R{sub D}). Six replicates of these groups were loaded onto fish transport barges that departed Lower Granite Dam on the Snake River between 29 April and 13 May, 2010. Acoustic receiver arrays between 70 and 220 km downstream of the barge evacuation site were used to detect tagged fish and served as the basis for estimation of survival within the barge. Tag-life-corrected estimates of reach survival were calculated for barged and control fish in each of the six replicate trials. The ratio of survival from release to Rkm 153 for barged fish relative to control fish provided the estimate of within-barge survival. The replicate survival estimates ranged from 0.9503 (SE = 0.0253) to 1.0003 (SE = 0.0155). The weighted average of the replicate estimates of within-barge survival was computed to be = 0.9833 (SE = 0.0062). This study provides the first documentation that assumed survival of 98% inside barges during yearling Chinook salmon smolt transport appears to be justified. Survival of other species or stocks by barge or for any species/stock by truck remains unknown.

A proportion of juvenile Chinook salmon and other salmonids travel through one or more turbines during seaward migration in the Columbia and Snake River every year. Despite this understanding, limited information exists on how these fish respond to hydraulic pressures found during turbine passage events. In this study we exposed juvenile Chinook salmon to varied acclimation pressures and subsequent exposure pressures (nadir) to mimic the hydraulic pressures of large Kaplan turbines (ratio of pressure change). Additionally, we varied abiotic (total dissolved gas, rate of pressure change) and biotic (condition factor, fish length, fish weight) factors that may contribute to the incidence of mortal injury associated with fish passing through hydro-turbines. We determined that the main factor associated with mortal injury of juvenile Chinook salmon during simulated turbine passage was the ratio between acclimation and nadir pressures. Condition factor, total dissolved gas, and the rate of pressure change were found to only slightly increase the predictive power of equations relating probability of mortal injury to conditions of exposure or characteristics of test fish during simulated turbine passage. This research will assist engineers and fisheries managers in operating and improving hydroelectric facility efficiency while minimizing mortality and injury of turbine-passed juvenile Chinook salmon. The results are discussed in the context of turbine development and the necessity of understanding how different species of fish will respond to the hydraulic pressures of turbine passage.

Core activities of the Grande Ronde Endemic Spring Chinook Supplementation Program (GRESCSP) are funded through the authority of the Lower Snake River Fish and Wildlife Compensation Plan (LSRCP). The LSRCP program was approved by the Water Resources Development Act of 1976, PL 94-587, Section 102, 94th Congress substantially in accordance with the Special Report, LSRCP, June 1975 on file with the Chief of Engineers. The LSRCP was prepared and submitted in compliance with the Fish and Wildlife Coordination Act of 1958, PL 85-624, 85th Congress, August 12, 1958 to mitigate for the losses of fish and wildlife caused by the construction of dams on lower Snake River. The GRESCSP is an artificial propagation program that was initiated by Bonneville Power Administrations Fish and Wildlife program in the mid 1990's. The intent of this program was to change the mitigation aspect of the LSRCP program (harvest mitigation) to an integrated supplementation program; inasmuch as, hatchery produced fish could be experimentally used as a recovery tool and fish surplus to mitigation would be available for in-place and in-kind harvest. Fish production is still authorized by the LSRCP with the original mitigation return goal of 5,860 adult spring Chinook to the project area. The GRESCSP was developed with two primary components: (1) conventional broodstock (projects 199800702; 199800703; 199800704) and (2) captive brood (projects 199801001; 199801006). The GRESCSP relies on cooperative M&E efforts from the LSRCP including setting aside the Wenaha and Minam tributaries as natural production reserves components used for reference streams. The GRESCSP, coordinated with federal and tribal partners, identifies production levels for both propagation components and weir management strategies for each of the three supplemented tributary areas within the Grande Ronde Sub-basin. The three supplemented areas are Catherine Creek, Lostine River, and upper Grande Ronde River. Lookingglass Creek, an extirpated area, will be stocked (smolts and adults) with Catherine Creek origin salmon to initiate natural production in unseeded habitat, and to initiate future harvest opportunities. The current production levels have been incorporated into the U.S. v. Oregon Interim Management Agreement. The purpose of this contract is to integrate Bonneville Power Administration (BPA) efforts with the Lower Snake River Compensation Plan (LSRCP) program utilizing Lookingglass Hatchery as the primary rearing facility. BPA constructed an adult holding and spawning structure on the hatchery grounds; however, maintenance of this infrastructure was discontinued due to funding limitation and transferred to the LSRCP program in 2007. These integrated efforts focus on holding and spawning adults, rearing juveniles, fish health, and monitoring natural production (Redd counts) for Catherine Creek, Lostine River, and Upper Grande Ronde stocks.

The Nez Perce Tribe, through funding provided by the Bonneville Power Administration, has implemented a small scale chinook salmon supplementation program on Johnson Creek, a tributary in the South Fork of the Salmon River, Idaho. The Johnson Creek Artificial Propagation Enhancement project was established to enhance the number of threatened Snake River spring/summer chinook salmon (Oncorhynchus tshawytscha) returning to Johnson Creek to spawn through artificial propagation. This was the sixth season of adult chinook broodstock collection in Johnson Creek following collections in 1998, 2000, 2001, 2002, and 2003. Weir installation was completed on June 21, 2004 with the first chinook captured on June 22, 2004 and the last fish captured on September 6, 2004. The weir was removed on September 18, 2004. A total of 338 adult chinook, including jacks, were captured during the season. Of these, 211 were of natural origin, 111 were hatchery origin Johnson Creek supplementation fish, and 16 were adipose fin clipped fish from other hatchery operations and therefore strays into Johnson Creek. Over the course of the run, 57 natural origin Johnson Creek adult chinook were retained for broodstock, transported to the South Fork Salmon River adult holding and spawning facility and held until spawned. The remaining natural origin Johnson Creek fish along with all the Johnson Creek supplementation fish were released upstream of the weir to spawn naturally. Twenty-seven Johnson Creek females were artificially spawned with 25 Johnson Creek males. Four females were diagnosed with high bacterial kidney disease levels resulting in their eggs being culled. The 27 females produced 116,598 green eggs, 16,531 green eggs were culled, with an average eye-up rate of 90.6% resulting in 90,647 eyed eggs. Juvenile fish were reared indoors at the McCall Fish Hatchery until November 2005 and then transferred to the outdoor rearing facilities during the Visual Implant Elastomer tagging operation. These fish continued rearing in the outdoor collection basin until release in March 2006. All of these fish were marked with Coded Wire Tags and Visual Implant Elastomer tags. In addition 12,056 of the smolts released were also tagged with Passive Integrated Transponder tags. Hand counts provided by marking crews were used to amend the number of juvenile salmon released from the original egg count. A total of 90,450 smolts were released directly into Johnson Creek on March 13 through 15, 2006.

This document is the first annual report for the study titled 'Ecology of Juvenile Salmonids in Shallow Tidal Freshwater Habitats in the Vicinity of the Sandy River Delta in the Lower Columbia River'. Hereafter, we refer to this research as the Tidal Freshwater Monitoring (TFM) Study. The study is part of the research, monitoring, and evaluation effort developed by the Action Agencies (Bonneville Power Administration, U.S. Army Corps of Engineers, U.S. Bureau of Reclamation) in response to obligations arising from the Endangered Species Act as a result of operation of the Federal Columbia River Power System (FCRPS). The project is performed under the auspices of the Northwest Power and Conservation Council's Columbia Basin Fish and Wildlife Program. The goal of the 2007-2009 Tidal Freshwater Monitoring Study is to answer the following questions: In what types of habitats within the tidal freshwater area of the lower Columbia River and estuary (LCRE; Figure 1) are yearling and subyearling salmonids found, when are they present, and under what environmental conditions?1 And, what is the ecological importance2 of shallow (0-5 m) tidal freshwater habitats to the recovery of Upper Columbia River spring Chinook salmon and steelhead and Snake RiverfallChinook salmon? Research in 2007 focused mainly on the first question, with fish stock identification data providing some indication of Chinook salmon presence at the variety of habitat types sampled. The objectives and sub-objectives for the 2007 study were as follows: (1) Habitat and Fish Community Characteristics-Provide basic data on habitat and fish community characteristics for yearling and subyearling salmonids at selected sites in the tidal freshwater reach in the vicinity of the Sandy River delta. (1a) Characterize vegetation assemblage percent cover, conventional water quality, substrate composition, and beach slope at each of six sampling sites in various tidal freshwater habitat types. (1b) Determine fish community characteristics, including species composition, abundance, and temporal and spatial distributions. (1c) Estimate the stock of origin for the yearling and subyearling Chinook salmon captured at the sampling sites using genetic analysis. (1d) Statistically assess the relationship between salmonid abundance and habitat parameters, including ancillary variables such as temperature and river stage. (2) Acoustic Telemetry Monitoring-Assess feasibility of applying Juvenile Salmon Acoustic Telemetry System (JSATS) technology to determine migration characteristics from upriver of Bonneville Dam through the study area (vicinity of the Sandy River delta/Washougal River confluence). (2a) Determine species composition, release locations, and distributions of JSATS-tagged fish. (2b) Estimate run timing, residence times, and migration pathways for these fish. Additionally, both objectives serve the purpose of baseline research for a potential tidal rechannelization project on the Sandy River. The U.S. Forest Service, in partnership with the Bonneville Power Administration and the U.S. Army Corps of Engineers, is currently pursuing reconnection of the east (relict) Sandy River channel with the current channel to improve fish and wildlife habitat in the Sandy River delta. Our study design and the location of sampling sites in this reach provide baseline data to evaluate the potential restoration.

The U.S. Army Corps of Engineers Portland District (CENWP) funds numerous evaluations of fish passage and survival on the Columbia River. In 2007, the CENWP asked Pacific Northwest National Laboratory to conduct an acoustic telemetry study to estimate the survival of juvenile Chinook salmon passing the spillway at Bonneville Dam. This report documents the study results which are intended to be used to improve the conditions juvenile anadromous fish experience when passing through the dams that the Corps operates on the river.

The Bonneville Power Administration (BPA) funded the development of two master plans which outline the rationale, and general approach, for implementing a defined group of projects that are an integral part of a comprehensive watershed goal to 'Protect, enhance and restore wild and natural populations of anadromous and resident fish within the Hood River Subbasin'. The Hood River Production Master Plan and the Pelton Ladder Master Plan were completed in 1991 and subsequently approved by the Northwest Power Planning Council in 1992. Action items identified in the two master plans, as well as in a later document entitled 'Hood River/Pelton Ladder Master Agreement' (ODFW and CTWSRO Undated), are designed to achieve two biological fish objectives: (1) to increase production of wild summer and winter steelhead (Oncorhynchus mykiss) to levels commensurate with the subbasins current carrying capacity and (2) re-establishing a self-sustaining population of spring chinook salmon (Oncorhynchus tshawytscha). Numerical fish objectives for subbasin escapement, spawner escapement, and subbasin harvest are defined for each of these species in Coccoli (2000). Several projects are presently funded by the BPA to achieve the Hood River subbasin's numerical fish objectives for summer and winter steelhead and spring chinook salmon. They include BPA project numbers 1998-021-00 (Hood River Fish Habitat), 1998-053-03 (Hood River Production Program - CTWSRO: M&E), 1998-053-07 (Parkdale Fish Facility), 1998-053-08 (Powerdale/Oak Springs O&M), and 1998-053-12 (Hood River Steelhead Genetics Study). Collectively, they are implemented under the umbrella of what has come to be defined as the Hood River Production Program (HRPP). The HRPP is jointly implemented by the Oregon Department of Fish and Wildlife (ODFW) and The Confederated Tribes of the Warm Springs Reservation of Oregon (CTWSRO). Strategies for achieving the HRPP's biological fish objectives for the Hood River subbasin were initially devised based on various assumptions about (1) subbasin carrying capacity, (2) survival rates for selected life history stages, and (3) historic and current escapements of wild, natural, and hatchery stocks of anadromous salmonids to the Hood River subbasin. The Oregon Department of Fish and Wildlife began funding a monitoring and evaluation (M&E) project in December 1991 to collect the quantitative biological information needed to (1) more accurately assess the validity of these assumptions and (2) evaluate the proposed hatchery supplementation component of the HRPP. Bonneville Power Administration assumed funding of the M&E project in August 1992. The M&E project was initially confined to sampling anadromous salmonids escaping to an adult trapping facility operated at Powerdale Dam; which is located at River Mile (RM) 4.5 on the mainstem of the Hood River. Stock specific life history and biological data was collected to (1) monitor subbasin spawner escapements and (2) collect pre-implementation data critical to evaluating the newly proposed HRPP's potential biological impact on indigenous populations of resident fish. The scope of the M&E project was expanded in 1994 to collect the data needed to quantify (1) subbasin smolt production and carrying capacity, (2) smolt to adult survival rates, and (3) the spatial distribution of indigenous populations of summer and winter steelhead, spring and fallchinook salmon, and coho salmon. A creel was incorporated into the M&E project in December 1996 to evaluate the HRPP with respect to its defined subbasin and spawner escapement objectives for Hood River stocks of wild and hatchery summer and winter steelhead and for natural and Deschutes stock hatchery spring chinook salmon. In 1996, the M&E project also began monitoring streamflow at various locations in the Hood River subbasin. Streamflow data will be used to correlate subbasin smolt production with summer streamflows. Data collected from 1991-1999 is reported in the following annual progress reports: Olsen et al. (1994), Olsen et al

The Grande Ronde Basin once supported large runs of chinook salmon Oncorhynchus tshawytscha and estimated peak escapements in excess of 10,000 occurred as recently as the late 1950's (U.S. Army Corps of Engineers 1975). Natural escapement declines in the Grande Ronde Basin have been severe and parallel those of other Snake River populations. Reduced productivity has primarily been attributed to increased mortality associated with downstream and upstream migration past eight dams and reservoirs in the Snake and Columbia rivers. Reduced spawner numbers, combined with human manipulation of previously important spawning and rearing habitat in the Grande Ronde Basin, have resulted in decreased spawning distribution and population fragmentation of chinook salmon in the Grande Ronde Basin (Figure 1; Table 1). Escapement of spring/summer chinook salmon in the Snake River basin included 1,799 adults in 1995, less than half of the previous record low of 3,913 adults in 1994. Catherine Creek, Grande Ronde River and Lostine River were historically three of the most productive populations in the Grande Ronde Basin (Carmichael and Boyce 1986). However, productivity of these populations has been poor for recent brood years. Escapement (based on total redd counts) in Catherine Creek and Grande Ronde and Lostine rivers dropped to alarmingly low levels in 1994 and 1995. A total of 11, 3 and 16 redds were observed in 1994 in Catherine Creek, upper Grande Ronde River and Lostine River, respectively, and 14, 6 and 11 redds were observed in those same streams in 1995. In contrast, the maximum number of redds observed in the past was 505 in Catherine Creek (1971), 304 in the Grande Ronde River (1968) and 261 in 1956 in the Lostine River (Tranquilli et al 2003). Redd counts for index count areas (a standardized portion of the total stream) have also decreased dramatically for most Grande Ronde Basin streams from 1964-2002, dropping to as low as 37 redds in the 119.5 km in the index survey areas in 1995 from as high as 1,205 redds in the same area in 1969 (Table 1). All streams reached low points (0-6 redds in the index areas) in the 1990's, except those in which no redds were found for several years and surveys were discontinued, such as Spring, Sheep and Indian creeks which had a total of 109 redds in 1969. The Minam and Wenaha rivers are tributaries of the Grande Ronde River located primarily in wilderness areas. Chinook salmon numbers in these two streams (based on redd counts) also decreased dramatically beginning in the early 1970's (Table 1). Since then there have been a few years of increasing numbers of redds but counts have generally been 25-40% of the number seen in the 1960's. No hatchery fish have been released into either of these streams and we monitor them during spawning ground surveys for the presence of hatchery strays. These populations will be used as a type of control for evaluating our supplementation efforts in Catherine Creek, upper Grande Ronde River and Lostine River. In this way, we can attempt to filter out the effects of downstream variables, over which we have no control, when we interpret the results of the captive broodstock program as the F1 and F2 generations spawn and complete their life cycles in the wild. The Grande Ronde Basin Captive Broodstock Program was initiated because these chinook salmon populations had reached critical levels where dramatic and unprecedented efforts were needed to prevent extinction and preserve any future options for use of endemic fish for artificial propagation programs for recovery and mitigation. This program was designed to quickly increase numbers of returning adults, while maintaining the genetic integrity of each endemic population.

The Comparative Survival Study (CSS) was initiated in 1996 as a multi-year program of the fishery agencies and tribes to estimate survival rates over different life stages for spring and summer chinook (hereafter, chinook) produced in major hatcheries in the Snake River basin and from selected hatcheries in the lower Columbia River. Much of the information evaluated in the CSS is derived from fish tagged with Passive Integrated Transponder (PIT) tags. A comparison of survival rates of chinook marked in two different regions (which differ in the number of dams chinook have to migrate through) provides insight into the effects of the Snake/Columbia hydroelectric system (hydrosystem). The CSS also compares the smolt-to-adult survival rates (SARs) for Snake Riverchinook that were transported versus those that migrated in-river to below Bonneville Dam. Additional comparisons can be made within in-river experiences as well comparison between the different collector projects from which smolts are transported. CSS also compares these survival rates for wild Snake River spring and summer chinook. These comparisons generate information regarding the relative effects of the current management actions used to recover this listed species.Scientists and managers have recently emphasized the importance of delayed hydrosystem mortality to long-term management decisions. Delayed hydrosystem mortality may be related to the smolts. experience in the Federal Columbia River Power System, and could occur for both smolts that migrate in-river and smolts that are transported. The CSS PIT tag information on in-river survival rates and smolt-to-adult survival rates (SARs) of transported and in-river fish are relevant to estimation of ''D'', which partially describes delayed hydrosystem mortality. ''D'', or differential delayed mortality, is the differential survival rate of transported fish relative to fish that migrate in-river, as measured from below Bonneville Dam to adults returning to Lower Granite Dam. A ''D'' equal to one indicates that there is no difference in survival rate after hydrosystem passage, while a ''D'' less than one indicates that transported smolts die at a greater rate after release, than smolts that have migrated through the hydrosystem. While the relative survival rates of transported and in-river migrants are important, the SARs must be also be sufficient to allow the salmon to persist and recover (Mundy et al. 1994). Decreased SARs could result from delayed hydrosystem mortality for either transported or in-river migrants, or both. Major objectives of CSS include: (1) development of a long-term index of transport SAR to in-river SAR for Snake River hatchery spring and summer chinook smolts measured at Lower Granite Dam; (2) develop a long-term index of survival rates from release of smolts at Snake River hatcheries to return of adults to the hatcheries; (3) compute and compare the overall SARs for selected upriver and downriver spring and summer chinook hatcheries; (4) begin a time series of SARs for use in hypothesis testing and in the regional long-term monitoring and evaluation program; (5) evaluate growth patterns of transported and in-river migrating smolts, and of upriver and downriver stocks. Primary CSS focus in this report for the 1997-1999 migration years included hatchery chinook tasks for objectives 1, 4 and 5.

The purpose of this compliance study was to estimate dam passage survival of subyearling Chinook salmon smolts at The Dalles Dam during summer 2010. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.93 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailrace 2 km below the dam The forebay-to-tailrace survival estimate satisfies the “BRZ-to-BRZ” survival estimate called for in the Fish Accords. , as well as the forebay residence time, tailrace egress time, and spill passage efficiency, as required in the Columbia Basin Fish Accords. The estimate of dam survival for subyearling Chinook salmon at The Dalles in 2010 was 0.9404 with an associated standard error of 0.0091.

The USFWS Mid-Columbia River Fishery Resource Office conducted snorkel surveys at 11 sites during the summer 2006 survey period and at 15 sites during fall 2006 and winter 2007 survey periods as part of the Integrated Status and Effectiveness Monitoring Program in the Entiat River. A total of 39,898 fish from 14 species/genera and an unknown category were enumerated. Chinook salmon were the overall most common fish observed and comprised 19% of fish enumerated followed by mountain whitefish (18%) and rainbow trout (14%). Day and night surveys were conducted during the summer 2006 period (August), while night surveys were conducted during the fall 2006 (October) and winter 2007 (February/March) surveys. This is second annual progress report to Bonneville Power Administration for the snorkel surveys conducted in the Entiat River as related to long-term effectiveness monitoring of restoration programs in this watershed. The objective of this study is to monitor the fish habitat utilization of planned in-stream restoration efforts in the Entiat River by conducting pre- and post-construction snorkel surveys at selected treatment and control sites.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

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Flaming Gorge Dam, a hydroelectric facility operated by the Bureau of Reclamation (Reclamation), is located on the Green River in Daggett County, northeastern Utah. In recent years, single peak releases each day or steady flows have been the operational pattern during the winter period. A double-peak pattern (two flow peaks each day) was implemented during the winter of 2006-2007 by Reclamation. Because there is no recent history of double-peaking at Flaming Gorge Dam, the potential effects of double-peaking operations on the body condition of trout in the dam's tailwater are not known. A study plan was developed that identified research activities to evaluate potential effects from double-peaking operations during winter months. Along with other tasks, the study plan identified the need to conduct a statistical analysis of existing data on trout condition and macroinvertebrate abundance to evaluate potential effects of hydropower operations. This report presents the results of this analysis. We analyzed historical data to (1) describe temporal patterns and relationships among flows, benthic macroinvertebrate abundance, and condition of brown trout (Salmo trutta) and rainbow trout (Oncorhynchus mykiss) in the tailwaters of Flaming Gorge Dam and (2) to evaluate the degree to which flow characteristics (i.e., flow volumes and flow variability) and benthic macroinvertebrate abundance affect the condition of trout in this area. This information, together with further analyses of size-stratified trout data, may also serve as baseline data to which the effects of potential future double-peaking flows can be compared. The condition (length, weight and/or relative weight) of rainbow trout (Oncorhynchus mykiss) at two sites in the Green River downstream of Flaming Gorge Dam (Tailrace and Little Hole) and weight of brown trout (Salmo trutta) at the Little Hole site has been decreasing since 1990 while the abundance of brown trout has been increasing at the two sites. At the same time, flow variability in the river has decreased and the abundance of total benthic macroinvertebrates at the Tailrace site has increased. The condition of trout in spring (averaged across all sampled trout) was positively correlated with fall and winter flow variability (including within-day skewness, within-season skewness and/or change in flow between days) at both locations. No negative correlations between trout condition and any measure of flow variability were detected. The length and weight of rainbow trout at the Little Hole site were negatively correlated with increasing fall and winter flow volume. The condition of brown trout at Little Hole and the condition of brown and rainbow trout at Tailrace were not correlated with flow volume. Macroinvertebrate variables during October were either positively correlated or not correlated with measures of trout condition at the Tailrace and Little Hole sites. With the exception of a positive correlation between taxa richness of macroinvertebrates in January and the relative weight of brown trout at Tailrace, the macroinvertebrate variables during January and April were either not correlated or negatively correlated with measures of trout condition. We hypothesize that high flow variability increased drift by dislodging benthic macroinvertebrates, and that the drift, in turn, resulted in mostly lower densities of benthic macroinvertebrates, which benefited the trout by giving them more feeding opportunities. This was supported by negative correlations between benthic macroinvertebrates and flow variability. Macroinvertebrate abundance (with the exception of ephemeropterans) was also negatively correlated with flow volume. The change in trout condition from fall to spring, as measured by the ratio of spring to fall relative weight, was evaluated to determine their usefulness as a standardized index to control for the initial condition of the fish as they enter the winter period. The ratio values were less correlated with the fall condition values than the spring condition values and did not show the same re

Threemile Falls Dam (Threemile Dam), located near the town of Umatilla, is the major collection and counting point for adult salmonids returning to the Umatilla River. Returning salmon and steelhead were collected at Threemile Dam from September 5, 1995 to July 1, 1996. A total of 2,081 summer steelhead (Oncorhynchus mykiss); 603 adult, 288 jack, and 338 subjack fallchinook (O. tshawytscha); 946 adult and 53 jack coho (O. kisutch); and 2,152 adult and 121 jack spring chinook (O. tshawytscha) were collected. All fish were trapped at the east bank facility. The Westland Canal juvenile facility (Westland), located near the town of Echo at rivermile (RM) 27, is the major collection point for outmigrating juvenile salmonids and steelhead kelts. The Threemile Dam west bank juvenile bypass was operated from September 8 to October 13, 1995 and from March 18 to June 30, 1996. The juvenile trap was operated from July 1 to July 11. Daily operations at the facility were conducted by the ODFW Fish Passage Research project to monitor juvenile outmigration.

This project was initiated to monitor surface fine sediment levels and overwinter intrusion of fine sediment in spring chinook salmon spawning habitat in the North Folk John Day and Grande Ronde Rivers, for five years.

The study was designed to evaluate the passage and survival of yearling and subyearling Chinook salmon and juvenile steelhead at McNary Dam as stipulated by the 2008 Biological Opinion and Fish Accords and to assess performance measures including route-specific fish passage proportions, travel times, and survival based upon a virtual/paired-release model. This study supports the USACE’s continual effort to improve conditions for juvenile anadromous fish passing through Columbia River dams.

The USFWS Mid-Columbia River Fishery Resource Office conducted snorkel surveys at 24 sites during the summer and fall periods of 2006 survey periods as part of the Integrated Status and Effectiveness Monitoring Program in the Entiat River. A total of 37,938 fish from 15 species/genera and an unknown category were enumerated. Chinook salmon were the overall most common fish observed and comprised 15% of fish enumerated followed by rainbow trout (10%) and mountain whitefish (7%). Day surveys were conducted during the summer period 2007 (August), while night surveys were conducted during the fall 2007 (October) surveys. The USFWS Mid-Columbia River Fishery Resource Office (MCFRO) operated two rotary screw traps on the Entiat River as part of the Integrated Status and Effectiveness Monitoring Program (ISEMP) program from August through November of 2007. Along with the smolt traps, juvenile emigrants were also captured at remote locations throughout the Entiat watershed and its major tributary, the Mad River. A total of 999 wild Oncorhynchus mykiss and 5,107 wild run O. tshawytscha were PIT tagged during the study period. Rotary screw trap efficiencies averaged 22.3% for juvenile O. tshawytscha and 9.0% for juvenile O. mykiss. Rotary screw traps operated 7 days a week and remote capture operations were conducted when flow and temperature regimes permitted. This is third annual progress report to Bonneville Power Administration for the snorkel surveys conducted in the Entiat River as related to long-term effectiveness monitoring of restoration programs in this watershed. The objective of this study is to monitor the fish habitat utilization of planned in-stream restoration efforts in the Entiat River by conducting pre- and post-construction snorkel surveys at selected treatment and control sites.

This report summarizes the life history and production data collected in the Hood River subbasin during FY 2008. Included is a summary of jack and adult life history data collected at the Powerdale Dam trap on seventeen complete run years of winter steelhead, spring and fallchinook salmon, and coho salmon, and on fifteen complete run years of summer steelhead. Also included are summaries of (1) the hatchery winter steelhead broodstock collection program; (2) hatchery production releases in the Hood River subbasin; (3) subbasin wild summer and winter steelhead smolt production, (4) numbers of hatchery summer and winter steelhead smolts leaving the subbasin; (5) smolt migration timing past Bonneville Dam, (6) wild and hatchery steelhead smolt-to-adult survival rates; (7) wild summer and winter steelhead egg to smolt survival rates; and (8) streamflow at selected locations in the Hood River subbasin. Data will be used in part to (1) evaluate the HRPP relative to its impact on indigenous populations of resident and anadromous salmonids (see Ardren Draft), (2) evaluate the HRPP's progress towards achieving the biological fish objectives defined in the Hood River Subbasin Plan (Coccoli 2004) and the Revised Master Plan for the Hood River Production Program (HDR|FishPro, ODFW, and CTWSRO 2008), (3) refine spawner escapement objectives to more accurately reflect subbasin carrying capacity, and (4) refine estimates of subbasin smolt production capacity to more accurately reflect current and potential subbasin carrying capacity.

The purpose of this compliance study was to estimate dam passage survival of subyearling Chinook salmon at The Dalles Dam during summer 2012. Under the 2008 Federal Columbia River Power System Biological Opinion, dam passage survival is required to be greater than or equal to 0.93 and estimated with a standard error (SE) less than or equal to 0.015. The study also estimated survival from the forebay 2 km upstream of the dam and through the tailrace to 2 km downstream of the dam, forebay residence time, tailrace egress time, spill passage efficiency (SPE), and fish passage efficiency (FPE), as required by the 2008 Columbia Basin Fish Accords.

The acoustic telemetry study reported here was conducted by researchers at Pacific Northwest National Laboratory (PNNL) and the University of Washington (UW) for the U.S. Army Corps of Engineers, Portland District (USACE). The purpose of the study was to estimate dam passage survival and other performance measures for yearling and subyearling Chinook salmon and steelhead at The Dalles Dam as stipulated by the 2008 Biological Opinion on operation of the Federal Columbia River Power System (FCRPS) and 2008 Columbia Basin Fish Accords.

Observations on the effects of water level fluctuations in the Hanford Reach of the Columbia River, Washington, were made in 1976 and 1977. The two years provided contrasting flow regimes: high water and fluctuations of greater magnitude prevailed in 1976; low water and higher temperatures prevailed in 1977. Situations where fish and other aquatic organisms were destroyed by changing water levels were observed and evaluated each year in three study areas: Hanford, F-Area, and White Bluffs sloughs. Losses primarily were due to stranding, entrapment (with or without complete dewatering), and predation. Juvenile fish were more susceptible to entrapment and stranding than were adult fish. Estimates of actual losses were biased and conservative because relatively few fish could be found after each decline of water level and dewatering. The most valued species of fish affected by water level fluctuations at Hanford were the anadromus fallchinook salmon (Oncorhynchus tshawytscha) and the resident smallmouth bass (Micropterus dolomieui). Crucial periods for chinook salmon occurred during winter when incubating eggs were in the gravel of the main channel, and before and during seaward migration in the spring when fry were abundant in shoreline zones. The crucial period for smallmouth bass was during spring and early summer when adults were spawning in warmed sloughs and shoreline zones. Chinook salmon and smallmouth bass fry were vulnerable to stranding and entrapment, and smallmouth bass nests were susceptible to exposure and temperature changes resulting from repeated water level fluctuations. Thus, flow manipulation may be crucial to their survival. The extent to which other species of riverine fish were affected by water level fluctuations depended upon their use of shoreline zones for spawning and rearing young.

This engineering feasibility and predesign report on the Tumwater Falls and Dryden Dam Fish Passage Project provides BPA with information for planning purposes and will serve as a discussion document for interested agencies. Tumwater Falls and Dryden Dams, both on the Wenatchee River, were built in the early 1900's as diversions for hydropower, and irrigation and hydropower, respectively. The present fishway facilities at both sites are inadequate to properly pass the anadromous fish runs in the Wenatchee River. These runs include spring and summer chinook salmon, sockeye salmon, coho salmon and steelhead trout. Predesign level drawings are provided in this report that represent fishway schemes capable of adequately passing present and projected fish runs. The effects of present passage facilities on anadromous fish stocks is addressed both quantitatively and qualitatively. The quantitative treatment assesses losses of adult migrants due to the structures and places an estimated value on those fish. The dollar figure is estimated to be between $391,000 and $701,000 per year for both structures. The qualitative approach to benefits deals with the concept of stock vigor, the need for passage improvements to help ensure the health of the anadromous fish stock. 29 references, 27 figures, 5 tables.

This project has developed procedures to assess the role of the fungal parasite, Saprolegnia in the biology of salmon, particularly adult Chinook, in the Columbia River Basin. Both morphological and DNA ``fingerprinting`` surveys reveal that Saprolegnia parasitica (=S. diclina, Type I) is the most common pathogen of these fish. In the first phase of this study 92% of 620 isolates, from salmon lesions, conformed to this taxa of Saprolegnia. In the current phase, the authors have developed variants of DNA fingerprinting (RAPD and SWAPP analysis) that permit examination of the sub-structure of the parasite population. These results confirm the predominance of S. parasitica, and suggest that at least three different sub-groups of this fungus occur in the Pacific N.W., USA. The use of single and paired primers with PCR amplification permits identification of pathogenic types, and distinction from other species of the genus considered to be more saprophytic in character. A year`s survey of saprolegniaceous fungi from Lake Washington indicated that the fish-pathogen was not common in the water column. Where and how fish encounter this parasite can be approached with the molecular tags identified in this project.

This report summarizes the life history and production data collected in the Hood River subbasin during FY 1998 and 1999. Included is a summary of jack and adult life history data collected at the Powerdale Dam trap on eight complete run years of winter steelhead, spring and fallchinook salmon, and coho salmon, and on seven complete run years of summer steelhead. Also included are summaries of (1) the hatchery winter steelhead broodstock collection program; (2) hatchery production releases in the Hood River subbasin; (3) the number of outmigrant wild rainbow-steelhead and hatchery summer and winter steelhead smolts; and (4) streamflow at selected locations in the Hood River subbasin. Data will be used in part to (1) evaluate the HRPP with respect to its impact on indigenous populations of resident and anadromous salmonids, (2) refine spawner escapement objectives to more accurately reflect subbasin carrying capacity, and (3) refine estimates of subbasin smolt production capacity to more accurately reflect current and potential subbasin carrying capacity. Baseline information on indigenous populations of resident and anadromous salmonids will continue to be collected for several years prior to full implementation of the Hood River Production Program.

A field study was conducted at Lower Granite Dam on the Snake River in 1992 to evaluate the feasibility of using time-lapse video technology to document and estimate fish ladder passage of chinook salmon Oncorhynchus tshawytscha, sockeye salmon 0. nerka, and steelhead 0. mykiss using time-lapse video technology. High quality video images were produced with a time-lapse video system operating in 72 h mode from 1 May through 31 December, 1992 and fish were counted from 1 June through 15 December. From the video record we counted 15 sockeye salmon, 3,283 summer chinook salmon, 1,022 fallchinook salmon, and 125,599 steelhead. The composite count of target species generated from the video record was similar (p = 0.617) to the estimate made by on-site counters during identical time periods indicating that the two methods were precise. Comparisons of 24 h video counts and on-site (10 and 16 h) counts showed that a significant (p < 0.001) proportion of target salmonids migrated during the nighttime when on-site counts are not typically made at Lower Granite Dam. The mean sockeye salmon fork length measured from video images was 453 mm. Mean fork-lengths reported for Snake River sockeye salmon between 1953 and 1965 were much greater ({female} = 546 mm {male} = 577 mm). Cost comparisons showed that video costs were less than half those of on-site counting methods. The video method also included the collection of additional data. A computer software demonstration program was developed that graphically illustrated the possibilities of a completely automated, computerized fish counting and identification system.

The purpose of this study was to estimate the survival for yearling Chinook salmon and steelhead smolts during spring 2010 in a portion of the Columbia River that includes Bonneville Dam. The study estimated smolt survival from a virtual release at Bonneville Dam to a survival array 81 km downstream of Bonneville Dam. We also estimated median forebay residence time, median tailrace egress time, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. A single release design was used to estimate survival from Bonneville Dam to a primary array located 81 km downstream of Bonneville. The approach did not include a reference tailrace release. Releases of acoustic-tagged smolts above John Day Dam to Hood River contributed to the formation of virtual releases at a Bonneville Dam forebay entrance array and at the face of the dam. A total of 3,880 yearling Chinook salmon and 3,885 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation.

The purpose of this study was to estimate the survival for yearling Chinook salmon and steelhead smolts during spring 2010 in a portion of the Columbia River that includes Bonneville Dam. The study estimated smolt survival from a virtual release at Bonneville Dam to a survival array 81 km downstream of Bonneville Dam. We also estimated median forebay residence time, median tailrace egress time, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. A single release design was used to estimate survival from Bonneville Dam to a primary array located 81 km downstream of Bonneville. The approach did not include a reference tailrace release. Releases of acoustic-tagged smolts above John Day Dam to Hood River contributed to the formation of virtual releases at a Bonneville Dam forebay entrance array and at the face of the dam. A total of 3,880 yearling Chinook salmon and 3,885 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation.

This report summarizes activities conducted by the Oregon Department of Fish and Wildlife's Juvenile Outmigration and Survival M&E project in the Umatilla River subbasin between 2004-2006. Information is used to make informed decisions on hatchery effectiveness, natural production success, passage improvement and flow enhancement strategies. Data collected includes annual estimates of smolt abundance, migration timing, and survival, life history characteristics and productivity status and trends for spring and fallChinook salmon, coho salmon and summer steelhead. Productivity data provided is the key subbasin scale measure of the effectiveness of salmon and steelhead restoration actions in the Umatilla River. Information is also used for regional planning and recovery efforts of Mid-Columbia River (MCR) ESA-listed summer steelhead. Monitoring is conducted via smolt trapping and PIT-tag interrogation at Three Mile Falls Dam. The Umatilla Juvenile Outmigration and Survival Project was established in 1994 to evaluate the success of management actions and fisheries restoration efforts in the Umatilla River Basin. Project objectives for the 2004-2006 period were to: (1) operate the PIT tag detection system at Three Mile Falls Dam (TMFD), (2) enhance provisional PIT-tag interrogation equipment at the east bank adult fish ladder, (3) monitor the migration timing, abundance and survival of naturally-produced juvenile salmonids and trends in natural production, (4) determine migration parameters and survival of hatchery-produced fish representing various rearing, acclimation and release strategies, (5) evaluate the relative survival between transported and non-transported fish, (6) monitor juvenile life history characteristics and evaluate trends over time, (7) investigate the effects of river, canal, fishway operations and environmental conditions on smolt migration and survival, (8) document the temporal distribution and diversity of resident fish species, and (9) participate in planning and coordination activities within the basin and dissemination of results.

Columbia River terminal fisheries have been conducted in Youngs Bay, Oregon, since the early 1960`s targeting coho salmon produced at the state facility on the North Fork Klaskanine River. In 1977 the Clatsop County Economic Development Council`s (CEDC) Fisheries Project began augmenting the Oregon Department of Fish and Wildlife production efforts. Together ODFW and CEDC smolt releases totaled 5,060,000 coho and 411,300 spring chinook in 1993 with most of the releases from the net pen acclimation program. During 1980-82 fall commercial terminal fisheries were conducted adjacent to the mouth of Big Creek in Oregon. All past terminal fisheries were successful in harvesting surplus hatchery fish with minimal impact on nonlocal weak stocks. In 1993 the Northwest Power Planning Council recommended in its` Strategy for Salmon that terminal fishing sites be identified and developed. The Council called on the Bonneville Power Administration to fund a 10-year study to investigate the feasibility of creating and expanding terminal known stock fisheries in the Columbia River Basin. The findings of the initial year of the study are included in this report. The geographic area considered for study extends from Bonneville Dam to the river mouth. The initial year`s work is the beginning of a 2-year research stage to investigate potential sites, salmon stocks, and methodologies; a second 3-year stage will focus on expansion in Youngs Bay and experimental releases into sites with greatest potential; and a final 5-year phase establishing programs at full capacity at all acceptable sites. After ranking all possible sites using five harvest and five rearing criteria, four sites in Oregon (Tongue Point, Blind Slough, Clifton Channel and Wallace Slough) and three in Washington (Deep River, Steamboat Slough and Cathlamet Channel) were chosen for study.

The Nez Perce Tribe Johnson Creek Artificial Propagation Enhancement Project (JCAPE) has conducted juvenile and adult monitoring and evaluation studies for its 10th consecutive year. Completion of adult and juvenile Chinook salmon studies were conducted for the purpose of evaluating a small-scale production initiative designed to increase the survival of a weak but recoverable spawning aggregate of summer Chinook salmon Oncorhynchus tshawytscha. The JCAPE program evaluates the life cycle of natural origin (NOR) and hatchery origin (HOR) supplementation fish to quantify the key performance measures: abundance, survival-productivity, distribution, genetics, life history, habitat, and in-hatchery metrics. Operation of a picket style weir and intensive multiple spawning ground surveys were completed to monitor adult Chinook salmon and a rotary screw trap was used to monitor migrating juvenile Chinook salmon in Johnson Creek. In 2007, spawning ground surveys were conducted on all available spawning habitat in Johnson Creek and one of its tributaries. A total of 63 redds were observed in the index reach and 11 redds for all other reaches for a combined count of 74 redds. Utilization of carcass recovery surveys and adult captures at an adult picket weir yielded a total estimated adult escapement to Johnson Creek of 438 Chinook salmon. Upon deducting fish removed for broodstock (n=52), weir mortality/ known strays (n=12), and prespawning mortality (n=15), an estimated 359 summer Chinook salmon were available to spawn. Estimated total migration of brood year 2005 NOR juvenile Chinook salmon at the rotary screw trap was calculated for three seasons (summer, fall, and spring). The total estimated migration was 34,194 fish; 26,671 of the NOR migrants left in the summer (July 1 to August 31, 2005) as fry/parr, 5,852 left in the fall (September 1 to November 21, 2005) as presmolt, and only 1,671 NOR fish left in the spring (March 1 to June 30, 2006) as smolt. In addition, there were 120,415 HOR supplementation smolts released into Johnson Creek during the week of March 12, 2007. Life stage-specific juvenile survival from Johnson Creek to Lower Granite and McNary dams was calculated for brood year 2005 NOR and HOR supplementation juvenile Chinook salmon. Survival of NOR parr Chinook salmon migrating from Johnson Creek to Lower Granite and McNary dams was 28.2% and 16.2%. Survival of NOR presmolt Chinook salmon migrating from Johnson Creek to Lower Granite and McNary dams was 28.2% and 22.3%. Survival of NOR smolt Chinook salmon migrating from Johnson Creek to Lower Granite and McNary dams was 44.7% and 32.9%. Survival of HOR smolt Chinook salmon migrating from Johnson Creek to Lower Granite and McNary dams was 31.9% and 26.2%. Multi-year analysis on smolt to adult return rate's (SAR's) and progeny to parent ratio's (P:P's) were calculated for NOR and HOR supplementation Brood Year 2002 Chinook salmon. SAR's were calculated from Johnson Creek to Johnson Creek (JC to JC), Lower Granite Dam to Lower Granite (LGD to LGD), and Lower Granite Dam to Johnson Creek (LGD to JC); for NOR fish SAR's were 0.16%, 1.16% and 1.12%, while HOR supplementation SAR's from JC to JC, LGD to LGD and LGD to JC were 0.04%, 0.19% and 0.13%. P:P's for all returning NOR and HOR supplemented adults were under replacement levels at 0.13 and 0.65, respectively. Recruit per spawner estimates (R/S) for Brood Year 2005 adult Chinook salmon were also calculated for NOR and HOR supplemented Chinook salmon at JC and LGD. R/S estimates for NOR and HOR supplemented fish at JC were 231 and 1,745, while R/S estimates at LGD were 67 and 557. Management recommendations address (1) effectiveness of data collection methods, (2) sufficiency of data quality (statistical power) to enable management recommendations, (3) removal of uncertainty and subsequent cessation of M&E activities, and (4) sufficiency of findings for program modifications prior to five-year review.

The objective of this study was to determine the best overall suture material to close incisions from the surgical implantation of Juvenile Salmon Acoustic Telemetry System (JSATS) acoustic microtransmitters in subyearling Chinook salmon Oncorhynchus tshawytscha. The effects of seven suture materials, four surgeons, and two water temperatures on suture retention, incision openness, tag retention, tissue inflammation, and tissue ulceration were quantified. The laboratory study, conducted by researchers at the Pacific Northwest National Laboratory, supports a larger effort under way for the U.S. Army Corps of Engineers, Portland District, aimed at determining the suitability of acoustic telemetry for estimating short- and longer-term (30-60 days) juvenile-salmonid survival at Columbia and Snake River dams and through the lower Columbia River.

This project was developed to conduct research to improve the efficacy of captive broodstock programs and advance hatchery reform throughout the Columbia River Basin. The project has three objectives: (1) maintain adaptive life history characteristics in Chinook salmon, (2) improve imprinting in juvenile sockeye salmon, and (3) match wild phenotypes in Chinook and sockeye salmon reared in hatcheries. A summary of the results are as follows: Objective 1: The ratio of jack to adult male Chinook salmon were varied in experimental breeding populations to test the hypothesis that reproductive success of the two male phenotypes would vary with their relative frequency in the population. Adult Chinook salmon males nearly always obtained primary access to nesting females and were first to enter the nest at the time of spawning. Jack male spawning occurred primarily by establishing satellite positions downstream of the courting pair, and 'sneaking' into the nest at the time of spawning. Male dominance hierarchies were fairly stable and strongly correlated with the order of nest entry at the time of spawning. Observed participation in spawning events and adult-to-fry reproductive success of jack and adult males was consistent with a negative frequency-dependent selection model. Overall, jack males sired an average of 21% of the offspring produced across a range of jack male frequencies. Implications of these and additional findings on Chinook salmon hatchery broodstock management will be presented in the FY 2009 Annual Report. Objective 2: To determine the critical period(s) for imprinting for sockeye salmon, juvenile salmon were exposed to known odorants at key developmental stages. Molecular assessments of imprinting-induced changes in odorant receptor gene expression indicated that regulation of odorant expression is influenced by developmental status and odor exposure history. Expression levels of basic amino acid receptor (BAAR) mRNA in the olfactory epithelium increased dramatically during final maturation in both Stanley Basin and Okanogan River sockeye. These increases appeared to be independent of odor exposure history, rising significantly in both arginine-naive and arginine-exposed fish. However, sockeye exposed to arginine during smolting demonstrated a larger increase in BAAR mRNA than arginine-naive fish. These results are consistent with the hypothesis that odorant receptors sensitive to home stream waters may be upregulated at the time of the homing migration and may afford opportunities to exploit this system to experimentally characterize imprinting success and ultimately identify hatchery practices that will minimize straying of artificially produced salmonids. Additional analysis of Sockeye salmon imprinting and further implications of these findings will be presented in the FY 2009 Annual Report. Objective 3: Photoperiod at emergence and ration after ponding were varied in Yakima River spring Chinook salmon to test the hypothesis that seasonal timing of emergence and growth during early stages of development alter seasonal timing of smoltification and age of male maturation. Fish reared under conditions to advance fry emergence and accelerate growth had the greatest variation in seasonal timing of smolting (fall, spring and summer) and highest rates of early male maturation with most males maturing at age 1 (35-40%). In contrast, fish with delayed emergence and slow growth had the least variation in phenotypes with most fish smolting as yearlings in the spring and no age-1 male maturation. Growth (not emergence timing) altered rates of age-2 male maturation. Results of this study demonstrate that altering fry development, as is often done in hatcheries, can profoundly affect later life history transitions and the range of phenotypes within a spring Chinook salmon population. Additional work in the next funding period will determine if these rearing regimes affected other aspects of smolt quality, which may affect ultimate survival upon ocean entry.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

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The Comparative Survival Study (CSS) was initiated in 1996 as a multi-year program of the fishery agencies and tribes to estimate survival rates over different life stages for spring and summer Chinook (hereafter, Chinook) produced in major hatcheries in the Snake River basin and from selected hatcheries in the lower Columbia River. Much of the information evaluated in the CSS is derived from fish tagged with Passive Integrated Transponder (PIT) tags. A comparison of survival rates of Chinook marked in two different regions (which differ in the number of dams Chinook have to migrate through) provides insight into the effects of the Snake/Columbia hydroelectric system (hydrosystem). The CSS also compares the smolt-to-adult survival rates (SARs) for Snake RiverChinook that were transported versus those that migrated in-river to below Bonneville Dam. Additional comparisons can be made within in-river experiences as well as comparison between the different collector projects from which smolts are transported. CSS also compares survival rates for wild Snake River spring and summer Chinook. These comparisons generate information regarding the relative effects of the current management actions used to recover this listed species. Scientists and managers have recently emphasized the importance of delayed hydrosystem mortality to long-term management decisions. Delayed hydrosystem mortality may be related to the smolts experience in the Federal Columbia River Power System, and could occur for both smolts that migrate in-river and smolts that are transported. The CSS PIT tag information on in-river survival rates and smolt-to-adult survival rates (SARs) of transported and in-river fish are relevant to estimation of ''D'', which partially describes delayed hydrosystem mortality. The parameter D is the differential survival rate of transported fish relative to fish that migrate in-river, as measured from below Bonneville Dam to adults returning to Lower Granite Dam. When D = 1, there is no difference in survival rate after hydrosystem passage. When D < 1, then transported smolts die at a greater rate after release below Bonneville Dam than smolts that have migrated in-river to below Bonneville Dam Major objectives of the CSS include: (1) development of a long-term index of transport SAR to in-river SAR for Snake River hatchery and wild spring and summer Chinook smolts measured at Lower Granite Dam; (2) develop a long-term index of survival rates from release of smolts at Snake River hatcheries to return of adults to the hatcheries; (3) compute and compare the overall SARs for selected upriver and downriver spring and summer Chinook hatchery and wild stocks; and (4) begin a time series of SARs for use in hypothesis testing and in the regional long-term monitoring and evaluation program. Primary CSS focus in this report is for wild and hatchery spring/summer Chinook that outmigrated in 1997 to 2002 and their respective adult returns through 2004.

The Nez Perce Tribe, through funding provided by the Bonneville Power Administration, has implemented a small scale chinook salmon supplementation program on Johnson Creek, a tributary in the South Fork of the Salmon River, Idaho. The Johnson Creek Artificial Propagation Enhancement project was established to enhance the number of threatened Snake River summer chinook salmon (Oncorhynchus tshawytscha) returning to Johnson Creek through artificial propagation. Adult chinook salmon collection and spawning began in 1998. A total of 114 fish were collected from Johnson Creek and 54 fish (20 males and 34 females) were retained for Broodstock. All broodstock were transported to Lower Snake River Compensation Plan's South Fork Salmon River adult holding and spawning facility, operated by the Idaho Department of Fish and Game. The remaining 60 fish were released to spawn naturally. An estimated 155,870 eggs from Johnson Creek chinook spawned at the South Fork Salmon River facility were transported to the McCall Fish Hatchery for rearing. Average fecundity for Johnson Creek females was 4,871. Approximately 20,500 eggs from females with high levels of Bacterial Kidney Disease were culled. This, combined with green-egg to eyed-egg survival of 62%, resulted in about 84,000 eyed eggs produced in 1998. Resulting juveniles were reared indoors at the McCall Fish Hatchery in 1999. All of these fish were marked with Coded Wire Tags and Visual Implant Elastomer tags and 8,043 were also PIT tagged. A total of 78,950 smolts were transported from the McCall Fish Hatchery and released directly into Johnson Creek on March 27, 28, 29, and 30, 2000.

We PIT-tagged juvenile spring chinook salmon reared at Lookingglass Hatchery in October 2002 as part of the Comparative Survival Rate Study (CSS) for migratory year (MY) 2003. We tagged 20,950 Imnaha stock spring chinook salmon, and after mortality and tag loss, we allowed the remaining 20,904 fish to leave the acclimation pond at our Imnaha River satellite facility beginning 1 April 2003 to begin their seaward migration. The fish remaining in the pond were forced out on 15 April 2003. We tagged 20,820 Catherine Creek stock captive and conventional brood progeny spring chinook salmon, and after mortality and tag loss, we allowed the remaining 20,628 fish to leave the acclimation ponds at our Catherine Creek satellite facility beginning during two acclimation periods. The volitional release for the early acclimation group began 12 March 2003, and all remaining fish were forced out of the ponds on 23 March 2003. The volitional release for the late acclimation group began 31 March 2003, and all remaining fish were forced out of the ponds on 14 April 2003. We estimated survival rates, from release to Lower Granite Dam in MY 2003, for three stocks of hatchery spring chinook salmon tagged at Lookingglass Hatchery to determine their relative migration performance. Survival rates for the Imnaha River, Lostine River, and Catherine Creek stocks were 0.714, 0.557, and 0.350, respectively. We PIT-tagged 20,944 BY 2002 Imnaha River stock and 20,980 BY 2002 Catherine Creek stock captive and conventional brood progeny in October and November 2003 as part of the CSS for MY 2004. From tagging to January 28, 2004, the rates of mortality and tag loss for Imnaha River stock were 0.16% and 0.04%, respectively. Catherine Creek stock, during the same period, had rates of mortality and tag loss of 0.19% and 0.06%, respectively.

In 1984, the Nez Perce National forest and the Bonneville Power Administration entered into a contractual agreement which provided for improvement of spring chinook salmon and summer steelhead trout habitat in south Fork Clearwater River tributaries. Project work was completed in seven main locations: Crooked River, Red River, Meadow Creek Haysfork Gloryhole, Cal-Idaho Gloryhole, Fisher Placer and Leggett Placer. This report describes restoration activities at each of these sites.

Chinook winds bring unseasonably warm temperatures to southern Alberta in the winter. They also melt the snow and evaporate, the surface and near surface soil water. Hitherto, the warmth of the wind had almost exclusively been linked to the ...

The purpose of this compliance study was to estimate dam passage survival of yearling and subyearling Chinook salmon and steelhead smolts at John Day Dam during the spring and summer outmigrations in 2012. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 for spring migrants and greater than or equal to 0.93 for summer migrants, estimated with a standard error (SE) less than or equal to 0.015. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailrace 3 km downstream of the dam, as well as the forebay residence time, tailrace egress time, spill passage efficiency (SPE), and fish passage efficiency (FPE), as required in the Columbia Basin Fish Accords (Fish Accords). A virtual/paired-release design was used to estimate dam passage survival at John Day Dam. The approach included releases of smolts, tagged with acoustic micro-transmitters, above John Day Dam that contributed to the formation of a virtual release at the face of John Day Dam. A survival estimate from this release was adjusted by a paired release below John Day Dam. A total of 3376 yearling Chinook salmon, 5726 subyearling Chinook salmon, and 3239 steelhead smolts were used in the virtual releases. Sample sizes for the below-dam paired releases (R2 and R3, respectively) were 997 and 995 for yearling Chinook salmon smolts, 986 and 983 for subyearling Chinook salmon smolts, and 1000 and 1000 for steelhead smolts. The Juvenile Salmon Acoustic Telemetry System (JSATS) tags were manufactured by Advanced Telemetry Systems. Model SS300 tags, weighing 0.304 g in air, were surgically implanted in yearling and subyearling Chinook salmon, and Model SS130 tag, weighing 0.438 g in air, were surgically implanted in juvenile steelhead for this investigation. The intent of the spring study was to estimate dam passage survival during both 30% and 40% spill conditions. The two spill conditions were to be systematically performed in alternating 2-day test intervals over the course of the spring outmigration. High flow conditions in 2012 interrupted the spill study. Dam passage survival was therefore estimated season-wide regardless of spill conditions.

The purpose of this compliance study was to estimate dam passage survival of yearling Chinook salmon and steelhead smolts at The Dalles Dam during spring 2010. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated smolt passage survival from the forebay boat-restricted zone (BRZ) to the tailrace BRZ at The Dalles Dam, as well as the forebay residence time, tailrace egress, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. A virtual/paired-release design was used to estimate dam passage survival at The Dalles Dam. The approach included releases of acoustic-tagged smolts above John Day Dam that contributed to the formation of a virtual release at the face of The Dalles Dam. A survival estimate from this release was adjusted by a paired release below The Dalles Dam. A total of 4,298 yearling Chinook salmon and 4,309 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation. The dam passage survival results are summarized as follows: Yearling Chinook Salmon 0.9641 (SE = 0.0096) and Steelhead 0.9535 (SE = 0.0097).

) or remain relatively productive (e.g., Hanford Reach fallchinook). Accordingly, this plan emphasizes, and migrating salmon and steelhead in the mainstem. This includes, among other things, protecting the Hanford included in these amendments to be "interim" while the Council works with the region to determine the most

This study investigated the maximum depth at which juvenile Chinook salmon Oncorhynchus tshawytscha can acclimate by attaining neutral buoyancy. Depth of neutral buoyancy is dependent upon the volume of gas within the swim bladder, which greatly influences the occurrence of injuries to fish passing through hydroturbines. We used two methods to obtain maximum swim bladder volumes that were transformed into depth estimations - the increased excess mass test (IEMT) and the swim bladder rupture test (SBRT). In the IEMT, weights were surgically added to the fishes exterior, requiring the fish to increase swim bladder volume in order to remain neutrally buoyant. SBRT entailed removing and artificially increasing swim bladder volume through decompression. From these tests, we estimate the maximum acclimation depth for juvenile Chinook salmon is a median of 6.7m (range = 4.6-11.6 m). These findings have important implications to survival estimates, studies using tags, hydropower operations, and survival of juvenile salmon that pass through large Kaplan turbines typical of those found within the Columbia and Snake River hydropower system.

Damaging foehn winds, locally known as “chinook” winds, are loosely defined and generally described for the east slopes of the Montana Rockies. Three upper-level patterns associated with chinook episodes in Montana are described and illustrated. ...

The Comparative Survival Study (CSS) was initiated in 1996 as a multi-year program of the fishery agencies and tribes to estimate survival rates over different life stages for spring and summer chinook (hereafter, chinook) produced in major hatcheries in the Snake River basin and from selected hatcheries in the lower Columbia River. Much of the information evaluated in the CSS is derived from fish tagged with Passive Integrated Transponder (PIT) tags. A comparison of survival rates of chinook marked in two different regions (which differ in the number of dams chinook have to migrate through) provides insight into the effects of the Snake/Columbia hydroelectric system (hydrosystem). The CSS also compares the smolt-to-adult survival rates (SARs) for Snake Riverchinook that were transported versus those that migrated in-river to below Bonneville Dam. Additional comparisons can be made within in-river experiences as well comparison between the different collector projects from which smolts are transported. CSS also compares these survival rates for wild Snake River spring and summer chinook. These comparisons generate information regarding the relative effects of the current management actions used to recover this listed species. Scientists and managers have recently emphasized the importance of delayed hydrosystem mortality to long-term management decisions. Delayed hydrosystem mortality may be related to the smolts experience in the Federal Columbia River Power System, and could occur for both smolts that migrate in-river and smolts that are transported. The CSS PIT tag information on in-river survival rates and smolt-to-adult survival rates (SARs) of transported and in-river fish are relevant to estimation of ''D'', which partially describes delayed hydrosystem mortality. The parameter D is the differential survival rate of transported fish relative to fish that migrate in-river, as measured from below Bonneville Dam to adults returning to Lower Granite Dam. When D = 1, there is no difference in survival rate after hydrosystem passage. When D < 1, then transported smolts die at a greater rate after release below Bonneville Dam than smolts that have migrated in-river to below Bonneville Dam. While the relative survival rates of transported and in-river migrants are important, the SARs must be also be sufficient to allow the salmon to persist and recover (Mundy et al. 1994). Decreased SARs could result from delayed hydrosystem mortality for either transported or in-river migrants, or both. Major objectives of the CSS include: (1) development of a long-term index of transport SAR to in-river SAR for Snake River hatchery and wild spring and summer chinook smolts measured at Lower Granite Dam; (2) develop a long-term index of survival rates from release of smolts at Snake River hatcheries to return of adults to the hatcheries; (3) compute and compare the overall SARs for selected upriver and downriver spring and summer chinook hatchery and wild stocks; and (4) begin a time series of SARs for use in hypothesis testing and in the regional long-term monitoring and evaluation program. Primary CSS focus in this report is for wild and hatchery spring/summer chinook that outmigrated in 1997 to 2000 and returned in 2003. Another goal of CSS was to help resolve uncertainty concerning marking, handling and bypass effects associated with control fish used in National Marine Fisheries Service's (NMFS) transportation research and evaluation. Significant concern had been raised that the designated control groups, which were collected, marked and released at dams, did not experience the same conditions as the in-river migrants which were not collected and bypassed under existing management, and that the estimated ratios of SARs of transported fish to SARs of control fish may be biased (Mundy et al. 1994). Instead of marking at the dams, as traditionally done for NMFS transportation evaluations, CSS began marking sufficient numbers of fish at the hatcheries and defining in-river groups from the detection histories at the dams (e.g., total

This report describes the Yakima Fisheries Project facilities (Cle Elum Hatchery and acclimation satellites) which provide the mechanism to conduct state-of-the-art research for addressing questions about spring chinook supplementation strategies. The definition, descriptions, and specifications for the Yakima spring chinook supplementation program permit evaluation of alternative fish culture techniques that should yield improved methods and procedures to produce wild-like fish with higher survival that can be used to rebuild depleted spring chinook stocks of the Columbia River Basin. The definition and description of three experimental treatments, Optimal Conventional (OCT), Semi-Natural (SNT), Limited Semi-Natural (LSNT), and the biological specifications for facilities have been completed for the upper Yakima spring chinook salmon stock of the Yakima Fisheries Project. The task was performed by the Biological Specifications Work Group (BSWG) represented by Yakama Indian Nation, Washington Department of Fish and Wildlife, National Marine Fisheries Service, and Bonneville Power Administration. The control and experimental variables of the experimental treatments (OCT, SNT, and LSNT) are described in sufficient detail to assure that the fish culture facilities will be designed and operated as a production scale laboratory to produce and test supplemented upper Yakima spring chinook salmon. Product specifications of the treatment groups are proposed to serve as the generic templates for developing greater specificity for measurements of product attributes. These product specifications will be used to monitor and evaluate treatment effects, with respect to the biological response variables (post release survival, long-term fitness, reproductive success and ecological interactions).

The goal of this project is to enhance and restore the ecological integrity and ecosystem function of the Grays River watershed. The recommended restoration and enhancement efforts developed in this project should incorporate local community stakeholder interests and needs. The objectives of this project are (1) to perform a comprehensive watershed and biological analysis, including hydrologic, geomorphic, and ecological assessment; (2) to develop a prioritized list of actions that protect and restore critical chum and Chinook salmon spawning habitat in the Grays River based on comprehensive geomorphic, hydrologic, and stream channel assessments; and (3) to gain a better understanding of chum and Chinook salmon habitat requirements and survival within the lower Columbia River and the Grays River sub-basin.

Underwater time- lapse video technology has been used to monitor adult spring and summer chinook salmon (Oncorhynchus tshawytscha) escapement into the Secesh River and Lake Creek, Idaho, since 1998. Underwater time-lapse videography is a passive methodology that does not trap or handle this Endangered Species Act listed species. Secesh Riverchinook salmon represent a wild spawning aggregate that has not been directly supplemented with hatchery fish. The Secesh River is also a control stream under the Idaho Salmon Supplementation study. This project has successfully demonstrated the application of underwater video monitoring to accurately quantify chinook salmon abundance in Lake Creek in 1998, 1999, 2001 and 2002. The adult salmon spawner escapement into Lake Creek in 2002 was 410 fish. Jack salmon comprised 7.1 percent of the run. Estimated hatchery composition was 6.1 percent of the spawning run. The first fish passage on Lake Creek was recorded on June 26, 15 days after installation of the fish counting station. Peak net upstream movement of 41 adults occurred on July 8. Peak of total movement activity was August 18. The last fish passed through the Lake Creek fish counting station on September 2. Snow pack in the drainage was 91% of the average during the winter of 2001/2002. Video determined salmon spawner abundance was compared to redd count expansion method point estimates in Lake Creek in 2002. Expanded index area redd count and extensive area redd count point estimates in 2002, estimated from one percent fewer to 56 percent greater number of spawners than underwater video determined spawner abundance. Redd count expansion methods varied from two percent fewer to 55 percent greater in 2001, 11 to 46 percent fewer in 1999 and 104 to 214 percent greater in 1998. Redd count expansion values had unknown variation associated with the point estimates. Fish per redd numbers determined by video abundance and multiple pass redd counts of the larger extensive survey areas in Lake Creek have varied widely. In 2002 there were 2.05 fish per redd. There were 2.07 fish per redd in 2001, 3.58 in 1999 and in 1998, with no jacks returning to spawn, there were 1.02 fish per redd. Migrating salmon in Lake Creek exhibited two behaviorally distinct segments of fish movement in 2002. Mainly upstream only movement of both sexes characterized the first segment. The second segment consisted of upstream and downstream movement with less net upstream movement and appeared to correspond with the time of active spawning. The fish counting stations did not impede salmon movements, nor was spawning displaced downstream. Fish moved freely upstream and downstream through the fish counting structures. The downstream movement of salmon afforded by this fish counting station design may be an important factor in the reproductive success of listed salmon. This methodology provides more accurate salmon spawner abundance information than expansion of single-pass and multiple-pass redd counts. Accurate adult escapement information would allow managers to determine if recovery actions benefited listed chinook salmon in tributary streams.

The chinook is the best example of the family of mountain winds that blows in regions where long mountain chains lie more or less at right angles to the prevailing wind. Apart from the unseasonable warmth it brings to the continental interior in ...

Investigation into the nature and size of the divergence of net radiation at night in Canada's chinook belt showed that the mean rate of radiative cooling exceeded the measured cooling rate by a statistically significant 2.26 in the layer z1–10 ...

From 1966 to 1968, Raymond estimated an average survival rate of 89% for yearling chinook salmon (Oncorhynchus tshawytscha) migrating from trap sites on the Salmon River to Ice Harbor Dam, which was then the uppermost dam on the Snake River. During the 1970s, the estimated survival rate declined as the proportion of hatchery fish increased and additional dams were constructed. Recent survival indices for yearling chinook salmon smolts in the Snake River Basin indicate that substantial mortalities are occurring en route to Lower Granite Dam, now the uppermost dam on the Snake River. Detection rates for wild and hatchery PIT-tagged smolts at Lower Granite Dam have been much lower than expected. However, for wild fish, there is considerable uncertainty whether overwinter mortality or smolt loss during migration is the primary cause for low survival. Efforts to rebuild these populations will have a better chance of success after the causes of mortality are identified and addressed. Information on the migrational characteristics and survival of wild fish are especially needed. The goal of this initial planning phase is to develop a research plan to outline potential investigations that will determine the timing, location, magnitude, and cause of smolt mortality above Lower Granite Dam.

The results of an analysis of the returns of PIT-tagged Snake River spring chinook and steelhead detected at Lower Granite Dam are summarized. Included is theoretical work on statistical power calculations for tests of return rates. The phrase return rate will be taken to mean return and detection rate. Knowledge that a fish has returned depends upon it being detected at Lower Granite Dam. Some returns are unaccounted for because they go through the navigation lock or manage to go through the adult bypass undetected. (1) Adult PIT tag recoveries to date are informative at least from a qualitative perspective. (2) The tagging levels by geographic region, rearing type, and, for chinook, life history stage have varied considerably since PIT tagging began on the Columbia River system. Early tagging studies were directed at Juvenile problems rather than adult return rates. As a result, comparisons in adult return rates between years, regions, etc., are more difficult. Global conclusions about the effect of potential treatments and/or natural factors, such as region of origin, on adult return rates are difficult to make until a more balanced. more consistent tagging study is implemented. (3) Along the same lines, tagging levels will need to be increased considerably if experiments are to be conducted to determine factors that affect return rates. E.g., approximately 46,000 fish in both the control and the treatment groups need to be PIT-tagged to detect a statistically significant difference with 80% probability. (4) Analysis of the available data suggests that life stage (parr or smolt), rearing type (hatchery or wild), and geographic location all affect the return rates for spring chinook. The data are limited, however. (5) Return rates for Snake River steelhead are roughly an order of magnitude greater than Snake River spring chinook return rates.

This is the ninth annual report for a multi-year project designed to monitor and evaluate supplementation of endemic spring Chinook salmon in Catherine Creek and the upper Grande Ronde River. These two streams historically supported anadromous fish populations that provided significant tribal and non-tribal fisheries, but in recent years, have experienced severe declines in abundance. Conventional and captive broodstock supplementation methods are being used to restore these spring Chinook salmon populations. Spring Chinook salmon populations in Catherine Creek and the upper Grande Ronde River, and other streams in the Snake River Basin have experienced severe declines in abundance over the past two decades (Nehlsen et al. 1991). A supplementation program was initiated in Catherine Creek and the upper Grande Ronde River, incorporating the use of both captive and conventional broodstock methods, in order to prevent extinction in the short term and eventually rebuild populations. The captive broodstock component of the program (BPA Project 199801001) uses natural-origin parr collected by seining and reared to maturity at facilities near Seattle, Washington (Manchester Marine Laboratory) and Hood River, Oregon (Bonneville Hatchery). Spawning occurs at Bonneville Hatchery, and resulting progeny are reared in hatcheries. Shortly before outmigration in the spring, juveniles are transferred to acclimation facilities. After an acclimation period of about 2-4 weeks, volitional release begins. Any juveniles remaining after the volitional release period are forced out. The conventional broodstock component uses returning adults collected at traps near the spawning areas, transported to Lookingglass Hatchery near Elgin, Oregon, held, and later spawned. The resulting progeny are reared, acclimated, and released similar to the captive broodstock component. All progeny released receive one or more marks including a fin (adipose) clip, codedwire tag, PIT tag, or visual implant elastomer tag. The numbers of adults used for conventional broodstock are determined by an agreement among comanagers (Zimmerman and Patterson 2002). Activities for this project focus on two life stages of spring Chinook salmon: juveniles during the migration from freshwater to the ocean and adults during prespawning migration through the end of spawning. Life history, production, and genetics are monitored and used to evaluate program effectiveness.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

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The Comparative Survival Study (CSS; BPA Project 199602000) began in 1996 with the objective of establishing a long term dataset of the survival rate of annual generations of salmon from their outmigration as smolts to their return to freshwater as adults to spawn (smolt-to-adult return rate; SAR). The study was implemented with the express need to address the question whether collecting juvenile fish at dams and transporting them downstream in barges and trucks and releasing them downstream of Bonneville Dam was compensating for the effect of the Federal Columbia River Power System (FCRPS) on survival of Snake Basin spring/summer Chinook salmon migrating through the hydrosystem. The Completion of this annual report for the CSS signifies the 12th outmigration year of hatchery spring/summer Chinook salmon marked with Passive Integrated Transponder (PIT) tags as part of the CSS and the 9th complete brood year return as adults of those PIT-tagged fish (report covers adult returns from 1997-2006 hatchery Chinook juvenile migrations). In addition, the CSS has provided PIT-tags to on-going tagging operations for wild Chinook since 2002 (report covers adult returns from 1994-2006 wild Chinook juvenile migrations). The CSS tags wild steelhead on the lower Clearwater River and utilized wild and hatchery steelhead from other tagging operations in evaluations of transportation (report covers adult returns from 1997-2005 wild and hatchery steelhead migrations). The primary purpose of this report is to update the time series of smolt-to-adult survival rate data and related parameters with additional years of data since the completion of the CSS 10-yr retrospective analysis report (Schaller et al 2007). The 10-yr report provided a synthesis of the results from this ongoing study, the analytical approaches employed, and the evolving improvements incorporated into the study as reported in CSS annual progress reports. This current report specifically addresses the constructive comments of the most recent regional technical review conducted by the Independent Scientific Advisory Board and Independent Scientific Review Panel (ISAB and ISRP 2007). This report completes the 3-salt returns from migration years 2004 for wild and hatchery Chinook and steelhead (all returns are to Lower Granite Dam). For wild and hatchery Chinook, this report also provides 3-salt returns from migration year 2005 and 2-salt returns from migration year 2006 through a cutoff date of August 13, 2008. For wild and hatchery steelhead, it provides completed 2-salt returns for wild and hatchery steelhead that outmigrated in 2005 (any 3-salt returns of PIT-tagged steelhead are few, but will occur after July 1, 2008). All of the Chinook salmon evaluated in the CSS study exhibit a stream-type life history. All study fish used in this report were uniquely identifiable based on a PIT-tag implanted in the body cavity during (or before) the smolt life stage and retained through their return as adults. These tagged fish can then be detected as juveniles and adults at several locations of the Snake and Columbia rivers. Reductions in the number of individuals detected as the tagged fish grow older provide estimates of survival. This allows comparisons of survival over different life stages between fish with different experiences in the hydrosystem (e.g. transportation vs. in-river migrants and migration through various numbers of dams) as illustrated in Figure 1.1. The CSS is a long term study within the Northwest Power and Conservation Council's Columbia Basin Fish and Wildlife Program (NPCC FWP) and is funded by Bonneville Power Administration (BPA). Study design and analyses are conducted through a CSS Oversight Committee with representation from Columbia River Inter-Tribal Fish Commission (CRITFC), Idaho Department of Fish and Game (IDFG), Oregon Department of Fish and Wildlife (ODFW), U.S. Fish and Wildlife Service (USFWS), and Washington Department of Fish and Wildlife (WDFW). The Fish Passage Center (FPC) coordinates the PIT-tagging efforts, data management and preparation

In 2010, researchers at Pacific Northwest National Laboratory (PNNL) and the University of Washington (UW) conducted a compliance monitoring study—the Lower Columbia River Acoustic Transmitter Investigations of Dam Passage Survival and Associated Metrics 2010 (Carlson et al. in preparation)—for the U.S. Army Corps of Engineers (USACE), Portland District. The purpose of the compliance study was to evaluate juvenile Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) passage routes and survival through the lower three Columbia River hydroelectric facilities as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp; NOAA Fisheries 2008) and the Columbia Basin Fish Accords (Fish Accords; 3 Treaty Tribes and Action Agencies 2008).

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This project was developed to conduct research to improve the efficacy of captive broodstock programs and advance hatchery reform throughout the Columbia river basin. The project has three objectives: (1) maintain adaptive life history characteristics in Chinook salmon, (2) improve imprinting in juvenile sockeye salmon, and (3) match wild phenotypes in Chinook and sockeye salmon reared in hatcheries. A summary of the results are as follows: Objective 1: Adult and jack Chinook salmon males were stocked into four replicate spawning channels at a constant density (N = 16 per breeding group), but different ratios, and were left to spawn naturally with a fixed number of females (N = 6 per breeding group). Adult males obtained primary access to females and were first to enter the nest at the time of spawning. Jack male spawning occurred primarily by establishing satellite positions downstream of the courting pair, and 'sneaking' into the nest at the time of spawning. Male dominance hierarchies were fairly stable and strongly correlated with the order of nest entry at the time of spawning. Spawning participation by jack and adult males is consistent with a negative frequency dependent selection model, which means that selection during spawning favors the rarer life history form. Results of DNA parentage assignments will be analyzed to estimate adult-to-fry fitness of each male. Objective 2: To determine the critical period(s) for imprinting for sockeye salmon, juvenile salmon were exposed to known odorants at key developmental stages. Molecular assessments of imprinting-induced changes in odorant receptor gene expression indicated that regulation of odorant expression is influenced by developmental status and odor exposure history. The results suggest that sockeye salmon are capable of imprinting to homing cues during the developmental periods that correspond to several of current release strategies employed as part of the Captive Broodstock program (specifically, planting eyed eggs, fall and smolt releases into the lake) appear to be appropriate for successful homing of sockeye in Redfish Lake. Also, our findings indicated that sockeye salmon were capable of olfactory imprinting at multiple life stages and over varying exposure durations. Fish exposed to odors just prior to smolting showed the strongest attraction to the imprinting odor arginine and this period corresponds to the period of highest plasma thyroxine levels and increased BAAR receptor mRNA in juveniles. Objective 3: Spring Chinook salmon were exposed to three different photoperiods and three feed rations at the button-up stage of development. Both photoperiod at emergence and ration post-ponding affected the number of males maturing at age one. Nearly 70% of the males in the early emergence and satiation fed group matured after the first year of rearing, while none of the fish reared on late emergence photoperiod (equivalent to emergence on May 1) matured during this time irrespective of ration treatment. Within the early emergence groups, reducing growth using ration (low or high) appeared to reduce the number of males maturing at age one from 70% to 40-50%. Maturation rates of fish that emerged in a photoperiod equivalent to mid-February (middle emergence) ranged from 10-25%. Together these data indicate that the seasonal timing of fry emergence and growth after ponding can alter life history patterns in spring Chinook salmon. The results imply that hatchery rearing practices that alter seasonal timing of fry emergence can have drastic effects on life history patterns in juvenile Chinook salmon. All three objectives are on-going and will result in recommendations (at the end of the FY 2009 performance period) to advance hatchery reforms in conventional and captive broodstock programs.

The year of 2002 represented the eighth year of a multi-year project, monitoring the outmigration and survival of juvenile salmonids in the lower Umatilla River. This project both supplements and complements various ongoing and completed work within the Umatilla River basin. Knowledge gained on juvenile outmigration and survival assists researchers and managers in adapting hatchery practices, flow enhancement strategies, canal and fish ladder operations, and supplementation and enhancement efforts of natural and restored fish populations. Findings from this study also assist in assessment of the success of upriver habitat improvement projects and provide an overall evaluation of the Umatilla River fisheries restoration program. General project objectives include: Evaluation of the outmigration and survival of natural and hatchery juvenile salmonids in the lower Umatilla River, in an effort to enhance the understanding of migration characteristics, survival bottlenecks, species interactions and effects of management strategies. Specific objectives for 2002 included: (1) Operation of the remote interrogation system at Three Mile Falls Dam, West Extension Canal; (2) Design of improved PIT tag detection capabilities at Three Mile Falls Dam east bank adult fish ladder; (3) Estimates of migrant abundance, migration timing and in-basin survival of tagged juvenile salmonids representing various hatchery, rearing, acclimation and release strategies; (4) Monitoring of abundance and trends in natural production of salmon, steelhead and pacific lamprey; (5) Continuation of transport evaluation studies to evaluate the relative survival between transported and nontransported fish; (6) Assessment of the condition, health, size, growth and smolt status of hatchery and natural migrants; (7) Investigation of the effects of canal and fishway operations and environmental conditions on fish migration and survival; (8) Documentation of temporal distribution and diversity of resident fish species; and (9) Participation in planning and coordination activities within the basin and dissemination of results. Key findings for 2002 revealed: (1) Migrant abundance of natural fish was roughly 10% that of hatchery produced fish; (2) An undetermined number of hatchery summer steelhead are residualizing in the upper Umatilla basin and potentially overwintering and migrating out as 2 year old smolts; (3) Transported fish may have a survival advantage over non-transported fish; (4) The later release of hatchery summer steelhead resulted in emigration timing that differed from that of naturally-produced fish; (5) Large-grade summer steelhead released lower in the river displayed improved survival over fish released higher; (6) Extended reared steelhead did not exhibit a survival advantage over standard reared fish; (7) Second year evaluation following reduction in the subyearling fallchinook program revealed survival to be similar to pre-reduction estimates; (8) Migration success was not improved nor in-river residence time reduced by acclimation of coho salmon at RM 56; (9) Early released spring chinook salmon migration and survival was unable to be evaluated due downstream monitoring facilities being in-operable during the early migration.

In the advent of the installation of a PIT-tag interrogation system in the Cascades Island fish ladder at Bonneville Dam, this report provides guidance on the anticipated precision of in-river survival estimates for returning adult salmonids, between Bonneville and Lower Granite dams, for various levels of system-wide adult detection probability at Bonneville Dam. Precision was characterized by the standard error of the survival estimates and the coefficient of variation of the survival estimates. The anticipated precision of in-river survival estimates for returning adult salmonids was directly proportional to the number of PIT-tagged smolts released and to the system-wide adult detection efficiency at Bonneville Dam, as well as to the in-river juvenile survival above Lower Granite Dam. Moreover, for a given release size and system-wide adult detection efficiency at Bonneville Dam, higher estuarine and marine survival rates also produced more precise survival estimates. With a system-wide detection probability of P{sub BA} = 1 at Bonneville Dam, the anticipated CVs for in-river survival estimate ranged between 9.4 and 20% with release sizes of 10,000 smolts. Moreover, if the system-wide adult detection efficiency at Bonneville Dam is less than maximum (i.e., P{sub BA} < 1), precision of CV {le} 20% could still be attained. For example, for releases of 10,000 PIT-tagged fish a CV of 20% in the estimates of in-river survival for returning adult salmon could be reach with system-wide detection probabilities of 0.2 {le} P{sub BA} {le} 0.6, depending on the tagging scenario.

The purpose of this study was to compare dam passage survival, at two spill treatment levels, of yearling Chinook salmon and steelhead smolts at John Day Dam during spring 2010. The two treatments were 30% and 40% spill out of total project discharge. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated forebay residence time, tailrace egress time, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. However, by agreement among the stakeholders, this study was not an official BiOp compliance test because the long-term passage measures at John Day Dam have yet to be finalized and another year of spill-treatment testing was desired.

The Portland District of the U.S. Army Corps of Engineers contracted with the Pacific Northwest National Laboratory (PNNL) to conduct three studies using acoustic telemetry to estimate detection probabilities and survival of juvenile Chinook salmon at three hydropower projects on the lower Columbia River. The primary goals were to estimate detection and survival probabilities based on sampling with JSATS equipment, assess the feasibility of using JSATS for survival studies, and estimate sample sizes needed to obtain a desired level of precision in future studies. The 2006 JSATS arrays usually performed as well or better than radio telemetry arrays in the JDA and TDA tailwaters, and underperformed radio arrays in the BON tailwater, particularly in spring. Most of the probabilities of detection on at least one of all arrays in a tailwater exceeded 80% for each method, which was sufficient to provide confidence in survival estimates. The probability of detection on one of three arrays includes survival and detection probabilities because fish may die or pass all three arrays undetected but alive.

In 2008, the National Marine Fisheries Service completed the sixteenth year of a study to estimate survival and travel time of juvenile salmonids Oncorhynchus spp. passing through dams and reservoirs on the Snake and Columbia Rivers. All estimates were derived from detections of fish tagged with passive integrated transponder (PIT) tags. We PIT tagged and released a total of 18,565 hatchery steelhead O. mykiss, 15,991 wild steelhead, and 9,714 wild yearling Chinook salmon O. tshawytscha at Lower Granite Dam in the Snake River. In addition, we utilized fish PIT tagged by other agencies at traps and hatcheries upstream from the hydropower system and at sites within the hydropower system in both the Snake and Columbia Rivers. These included 122,061 yearling Chinook salmon tagged at Lower Granite Dam for evaluation of latent mortality related to passage through Snake River dams. PIT-tagged smolts were detected at interrogation facilities at Lower Granite, Little Goose, Lower Monumental, Ice Harbor, McNary, John Day, and Bonneville Dams and in the PIT-tag detector trawl operated in the Columbia River estuary. Survival estimates were calculated using a statistical model for tag-recapture data from single release groups (the single-release model). Primary research objectives in 2008 were to: (1) estimate reach survival and travel time in the Snake and Columbia Rivers throughout the migration period of yearling Chinook salmon and steelhead, (2) evaluate relationships between survival estimates and migration conditions, and (3) evaluate the survival estimation models under prevailing conditions. This report provides reach survival and travel time estimates for 2008 for PIT-tagged yearling Chinook salmon (hatchery and wild), hatchery sockeye salmon O. nerka, hatchery coho salmon O. kisutch, and steelhead (hatchery and wild) in the Snake and Columbia Rivers. Additional details on the methodology and statistical models used are provided in previous reports cited here. Survival and detection probabilities were estimated precisely for most of the 2008 yearling Chinook salmon and steelhead migrations. Hatchery and wild fish were combined in some of the analyses. For yearling Chinook salmon, overall percentages for combined release groups used in survival analyses in the Snake River were 80% hatchery-reared and 20% wild. For steelhead, the overall percentages were 65% hatchery-reared and 35% wild. Estimated survival from the tailrace of Lower Granite Dam to the tailrace of Little Goose Dam averaged 0.939 for yearling Chinook salmon and 0.935 for steelhead.

Steelhead (Oncorhynchus mykiss) and chinook salmon (Oncorhynchus tshawytscha) populations in the Northwest are decreasing. Genetic diversity is being lost at an alarming rate. Along with reduced population and genetic variability, the loss of biodiversity means a diminished environmental adaptability. The Nez Perce Tribe (Tribe) strives to ensure availability of genetic samples of the existing male salmonid population by establishing and maintaining a germplasm repository. The sampling strategy, initiated in 1992, has been to collect and preserve male salmon and steelhead genetic diversity across the geographic landscape by sampling within the major river subbasins in the Snake River basin, assuming a metapopulation structure existed historically. Gamete cryopreservation conserves genetic diversity in a germplasm repository, but is not a recovery action for listed fish species. The Tribe was funded in 2001 by the Bonneville Power Administration (BPA) and the U.S. Fish and Wildlife Service Lower Snake River Compensation Plan (LSRCP) to coordinate gene banking of male gametes from Endangered Species Act (ESA) listed steelhead and spring and summer chinook salmon in the Snake River basin. In 2001, a total of 398 viable chinook salmon semen samples from the Lostine River, Catherine Creek, upper Grande Ronde River, Lookingglass Hatchery (Imnaha River stock), Lake Creek, the South Fork Salmon River weir, Johnson Creek, Big Creek, Capehorn Creek, Marsh Creek, Pahsimeroi Hatchery, and Sawtooth Hatchery (upper Salmon River stock) were cryopreserved. Also, 295 samples of male steelhead gametes from Dworshak Hatchery, Fish Creek, Grande Ronde River, Little Sheep Creek, Pahsimeroi Hatchery and Oxbow Hatchery were also cryopreserved. The Grande Ronde chinook salmon captive broodstock program stores 680 cryopreserved samples at the University of Idaho as a long-term archive, half of the total samples. A total of 3,206 cryopreserved samples from Snake River basin steelhead and spring and summer chinook salmon, from 1992 through 2001, are stored in two independent locations at the University of Idaho (UI) and Washington State University (WSU). Two large freezer tanks are located at each university. Recommendations for future gene banking efforts include the need for establishment of a regional genome resource bank, an emphasis on cryopreserving wild unmarked fish, continued fertility trials, and genetic analysis on all fish represented in the germplasm repository.

The Grande Ronde Basin Spring Chinook Salmon Captive Broodstock Program is designed to rapidly increase numbers of Chinook salmon in stocks that are in imminent danger of extirpation in Catherine Creek (CC), Lostine River (LR) and upper Grande Ronde River (GR). Natural parr are captured and reared to adulthood in captivity, spawned (within stocks) and their progeny reared to smoltification before being released into the natal stream of their parents. This program is co-managed by ODFW, National Marine Fisheries Service, Nez Perce Tribe and Confederated Tribes of the Umatilla Indian Reservation. Presmolt rearing was initially conducted at Lookingglass Fish Hatchery (LFH) but parr collected in 2003 and later were reared at Wallowa Fish Hatchery (WFH). Post-smolt rearing is conducted at Bonneville Fish Hatchery (BOH - freshwater) and at Manchester Research Station (MRS - saltwater). The CC and LR programs are being terminated, as these populations have achieved the goal of a consistent return of 150 naturally spawning adults, so the 2005 brood year was the last brood year collected for theses populations. The Grande Ronde River program continued with 300 fish collected each year. Currently, we are attempting to collect 150 natural parr and incorporate 150 parr collected as eggs from females with low ELISA levels from the upper Grande Ronde River Conventional Hatchery Program. This is part of a comparison of two methods of obtaining fish for a captive broodstock program: natural fish vs. those spawned in captivity. In August 2007, we collected 152 parr (BY 2006) from the upper Grande Ronde River and also have 155 Grande Ronde River parr (BY 2006) that were hatched from eyed eggs at LFH. During 2008, we were unable to collect natural parr from the upper Grande Ronde River. Therefore, we obtained 300 fish from low ELISA females from the upper Grande Ronde River Conventional Program. In October 2008 we obtained 170 eyed eggs from the upper Grande Ronde river Conventional Hatchery Program. We will attempt to collect natural parr in August 2009. This year 752 fish were removed from the captive population: 629 fish survived to gamete production and 123 fish died from various causes prior to spawning. Growth of the Captive Broodstock fish was similar to previous years. The saltwater fish have grown more slowly than those reared in freshwater. A total of 720 fish were sorted as maturing and 629 (87.4%) of them survived to spawn. We collected gametes from 273 females and 350 males from the 2002-2006 brood years in 2008, using 111 spawning matrices and collected 474,187 green eggs (1,737 eggs/female). All ripe males were spawned and no semen was collected for cryo-preservation. Of the 474,187 eggs collected for the BY 2008 F1 generation, 448,373 (94.6%) survived to the eyed stage. 68,612 (15.3%) were culled from females with high ELISA OD values for BKD prevention. For BY 2007, we collected a total of 477,048 eggs from all three populations and 407,369 (85.4%) reached the eyed stage, while 95,024 eyed eggs (23.3%) were culled for BKD prevention. Eyed eggs were hatched at Lookingglass Fish Hatchery, producing 267,131 fry. As parr, 153,371 fish were coded-wire tagged (CWT). For the 2006 F1 brood year, we collected 177,890 eggs and 149,073 (83.8%) reached the eyed stage. 83,826 eyed eggs (56.2%) were culled at the eyed stage for BKD prevention. 61,044 fry were produced (93.6%), 53,688 (88 %) survived to smolt. There were 54 bacterial kidney disease (BKD) mortalities at BOH and MRS, combined in this reporting period. Overall, there were fewer BKD mortalities in 2008 due to a reduced number of fish coming into the Captive Broodstock Program and a shift away from collecting wild parr to using eyed eggs from low ELISA females from the Conventional Hatchery Program. Unknown causes of death accounted for 32 deaths at MRS and BOH, combined in 2008. We continually examine and modify the operations of the Captive Broodstock Program to make improvements wherever possible. We continue to have difficulty with prevention and treatment of BKD outbreak

This study began in 1998 to assess salmonid distribution, relative abundance, genetics, and the condition of salmonid habitats in the Walla Walla River basin. Stream flows in the Walla Walla Basin continue to show a general trend that begins with a sharp decline in discharge in late June, followed by low summer flows and then an increase in discharge in fall and winter. Manual stream flow measurements at Pepper bridge showed an increase in 2002 of 110-185% from July-September, over flows from 2001. This increase is apparently associated with a 2000 settlement agreement between the U.S. Fish and Wildlife Service (USFWS) and the irrigation districts to leave minimum flows in the river. Stream temperatures in the Walla Walla basin were similar to those in 2001. Upper montane tributaries maintained maximum summer temperatures below 65 F, while sites in mid and lower Touchet and Walla Walla rivers frequently had daily maximum temperatures well above 68 F (high enough to inhibit migration in adult and juvenile salmonids, and to sharply reduce survival of their embryos and fry). These high temperatures are possibly the most critical physiological barrier to salmonids in the Walla Walla basin, but other factors (available water, turbidity or sediment deposition, cover, lack of pools, etc.) also play a part in salmonid survival, migration, and breeding success. The increased flows in the Walla Walla, due to the 2000 settlement agreement, have not shown consistent improvements to stream temperatures. Rainbow/steelhead (Oncorhynchus mykiss) trout represent the most common salmonid in the basin. Densities of Rainbow/steelhead in the Walla Walla River from the Washington/Oregon stateline to Mojonnier Rd. dropped slightly from 2001, but are still considerably higher than before the 2000 settlement agreement. Other salmonids including; bull trout (Salvelinus confluentus), chinook salmon (Oncorhynchus tshawytscha), mountain whitefish (Prosopium williamsoni), and brown trout (Salmo trutta) had low densities, and limited distribution throughout the basin. A large return of adult spring chinook to the Touchet River drainage in 2001 produced higher densities of juvenile chinook in 2002 than have been seen in recent years, especially in the Wolf Fork. The adult return in 2002 was substantially less than what was seen in 2001. Due to poor water conditions and trouble getting personnel hired, spawning surveys were limited in 2002. Surveyors found only one redd in four Walla Walla River tributaries (Cottonwood Ck., East Little Walla Walla, West Little Walla Walla, and Mill Ck.), and 59 redds in Touchet River tributaries (10 in the North Fork Touchet, 30 in the South Fork Touchet, and 19 in the Wolf Fork). Bull trout spawning surveys in the upper Touchet River tributaries found a total of 125 redds and 150 live fish (92 redds and 75 fish in the Wolf Fork, 2 redds and 1 fish in the Burnt Fork, 0 redds and 1 fish in the South Fork Touchet, 29 redds and 71 fish in the North Fork Touchet, and 2 redds and 2 fish in Lewis Ck.). A preliminary steelhead genetics analysis was completed as part of this project. Results indicate differences between naturally produced steelhead and those produced in the hatchery. There were also apparent genetic differences among the naturally produced fish from different areas of the basin. Detailed results are reported in Bumgarner et al. 2003. Recommendations for assessment activities in 2003 included: (1) continue to monitor the Walla Walla River (focusing from the stateline to McDonald Rd.), the Mill Ck system, and the Little Walla Walla System. (2) reevaluate Whiskey Ck. for abundance and distribution of salmonids, and Lewis Ck. for bull trout density and distribution. (3) select or develop a habitat survey protocol and begin to conduct habitat inventory and assessment surveys. (4) summarize bull trout data for Mill Ck, South Fork Touchet, and Lewis Ck. (5) begin to evaluate temperature and flow data to assess if the habitat conditions exist for spring chinook in the Touchet River.

Bacterial kidney disease (BKD), caused by Renibacterium salmoninarum (RS), is a serious disease of salmonid fish worldwide. The disease has a major impact on spring chinook salmon populations in the Columbia River system. There is strong evidence that RS can be transmitted from parent to progeny, and segregation of progeny based on levels of antigen detected in adult fish may obviate this mode of transmission. Results from the second year of a four year study to investigate segregation of broodstock as a tool for controlling BKD are presented. To segregate the progeny of adult fish infected with RS we have used enzyme-linked immunosorbent assays (ELISAs) optimized in the first year of this project. Gametes from fish either injected with erythromycin or receiving no antibiotic injection were successfully segregated into groups having either high or low levels of the RS soluble antigen. Screening of eggs from infected adults has not revealed any detectable antigen present in the egg tissue. Development of a rapid, field ELISA has been accomplished this year. The field ELISA utilizes monoclonal antibodies currently employed in the monoclonal antibody-based ELISA. The sensitivity of the field ELISA approaches that of the monoclonal ELISA, and has been tested on 150 adult chinook salmon. A high correlation exists between samples assayed by the monoclonal ELISA, field ELISA, and direct FAT. An alternative system for detecting RS soluble antigen, the Western blot, has also been improved. Using a chemiluminescent substrate, the sensitivity of detection has been increase 50--100 fold. 16 refs., 15 figs., 2 tabs.

A multifactor study was conducted by Battelle for the US Army Corps of Engineers to assess the significance of the presence of a radio telemetry transmitter on the effects of rapid decompression from simulated hydro turbine passage on depth acclimated juvenile run-of-the-riverChinook salmon. Study factors were: (1) juvenile chinook salmon age;, subyearling or yearling, (2) radio transmitter present or absent, (3) three transmitter implantation factors: gastric, surgical, and no transmitter, and (4) four acclimation depth factors: 1, 10, 20, and 40 foot submergence equivalent absolute pressure, for a total of 48 unique treatments. Exposed fish were examined for changes in behavior, presence or absence of barotrauma injuries, and immediate or delayed mortality. Logistic models were used to test hypotheses that addressed study objectives. The presence of a radio transmitter was found to significantly increase the risk of barotrauma injury and mortality at exposure to rapid decompression. Gastric implantation was found to present a higher risk than surgical implantation. Fish were exposed within 48 hours of transmitter implantation so surgical incisions were not completely healed. The difference in results obtained for gastric and surgical implantation methods may be the result of study design and the results may have been different if tested fish had completely healed surgical wounds. However, the test did simulate the typical surgical-release time frame for in-river telemetry studies of fish survival so the results are probably representative for fish passing through a turbine shortly following release into the river. The finding of a significant difference in response to rapid decompression between fish bearing radio transmitters and those not implies a bias may exist in estimates of turbine passage survival obtained using radio telemetry. However, the rapid decompression (simulated turbine passage) conditions used for the study represented near worst case exposure for fish passing through turbines. At this time, insufficient data exist about the distribution of river-run fish entering turbines, and particularly, the distribution of fish passing through turbine runners, to extrapolate study findings to the population of fish passing through FCRPS turbines. This study is the first study examining rapid decompression study to include acclimation depth as an experimental factor for physostomous fish. We found that fish acclimated to deeper depth were significantly more vulnerable to barotrauma injury and death. Insufficient information about the distribution of fish entering turbines and their depth acclimation currently exists to extrapolate these findings to the population of fish passing through turbines. However, the risk of barotrauma for turbine-passed fish could be particularly high for subyearling Chinook salmon that migrate downstream at deeper depths late in the early summer portion of the outmigration. Barotrauma injuries led to immediate mortality delayed mortality and potential mortality due to increased susceptibility to predation resulting from loss of equilibrium or swim bladder rupture.

The Umatilla habitat improvement program is funded under the Northwest Power Planning Council`s Columbia River Basin Fish and Wildlife Program measure 704 (d) (1) 34.02, and targets the improvement of water quality and the restoration of riparian areas, spawning and rearing habitat of steelhead, spring and fallchinook and coho salmon. The Confederated Tribes of the Umatilla Indian Reservation are responsible for enhancing stream reaches within the Reservation boundaries as guided by an implementation plan developed cooperatively with the Oregon Department of Fish and Wildlife and the USDA Forest Service, Umatilla National Forest. Treatment areas included the lower 4 miles of Meacham Creek, the lower {1/4} mile of Boston Canyon Creek, and the Umatilla River between RM 78.5 and 80. The upper {1/2} of the Meacham Creek project area including Boston Canyon Creek, which were initially enhanced during 1989, were reentered for maintenance and continued enhancements. Approximately 2400 cu. yds. of boulders and 1000 cu. yds. of riprap was used in the construction of in-stream, stream bank and flood plain structures and in the anchoring of large organic debris (LOD) placements. In-stream structures were designed to increase instream cover and channel stability and develop of a defined thalweg to focus low summer flows. Flood plain structures were designed to reduce sediment inputs and facilitate deposition on flood plains. Riparian recovery was enhanced through the planting of over 1000 willow cuttings and 400 lbs. of grass seed mix and through the exclusion of livestock from the riparian corridor with 4.5 miles of high tensile smooth wire fence. Photo documentation and elevational transects were used to monitor changes in channel morphology and riparian recovery at permanent standardized points throughout the projects. Water quality (temperature and turbidity) data was collected at locations within the project area and in tributaries programmed for future enhancements.

The study reported herein was funded as part of the Anadromous Fish Evaluation Program, which is managed by the U.S. Army Corps of Engineers (USACE). The Anadromous Fish Evaluation Program study code is EST P 02 01: A Study of Salmonid Survival and Behavior through the Columbia River Estuary Using Acoustic Tags. The study was conducted by the Pacific Northwest National Laboratory (PNNL) and National Oceanic and Atmospheric Administration (NOAA) Fisheries for the USACE Portland District. Estimated survival of acoustic-tagged juvenile Chinook salmon and steelhead through the lower Columbia River and estuary in 2009 was lowest in the final 50 km of the estuary. Probability of survival was relatively high (>0.90) for yearling and subyearling Chinook salmon from the Bonneville Dam forebay (rkm 236) to Three-tree Point (rkm 49.6). Survival of juvenile Chinook salmon declined sharply through the lower 50 km of the estuary. Acoustic-tagged steelhead smolts did not survive as well as juvenile Chinook salmon between Bonneville Dam and the mouth of the Columbia River. Steelhead survival began to decline farther upstream (at rkm 86) relative to that of the Chinook salmon stocks. Subyearling Chinook salmon survival decreased markedly as the season progressed. It remains to be determined whether later migrating subyearling Chinook salmon are suffering increasing mortality as the season progresses or whether some portion of the apparent loss is due to fish extending their freshwater residence. This study provided the first glimpse into what promises to be a very informative way to learn more about how juvenile salmonid passage experiences through the FCRPS may influence their subsequent survival after passing Bonneville Dam. New information regarding the influence of migration pathway through the lower 50 km of the Columbia River estuary on probability of survival of juvenile salmonids, combined with increased understanding regarding the foraging distances and time periods of avian predators should prove useful in developing or assessing management actions to reduce losses of juvenile salmonid smolts that attempt to pass through the estuary on their seaward migration.

The Nez Perce Tribal Hatchery (NPTH) program has the following goals (BPA, et al., 1997): (1) Protect, mitigate, and enhance Clearwater Subbasin anadromous fish resources; (2) Develop, reintroduce, and increase natural spawning populations of salmon within the Clearwater Subbasin; (3) Provide long-term harvest opportunities for Tribal and non-Tribal anglers within Nez Perce Treaty lands within four generations (20 years) following project initiation; (4) Sustain long-term fitness and genetic integrity of targeted fish populations; (5) Keep ecological and genetic impacts to non-target populations within acceptable limits; and (6) Promote Nez Perce Tribal management of Nez Perce Tribal Hatchery Facilities and production areas within Nez Perce Treaty lands. The NPTH program was designed to rear and release 1.4 million fall and 625,000 spring Chinook salmon. Construction of the central incubation and rearing facility NPTH and spring Chinook salmon acclimation facilities were completed in 2003 and the first full term NPTH releases occurred in 2004 (Brood Year 03). Monitoring and evaluation plans (Steward, 1996; Hesse and Cramer, 2000) were established to determine whether the Nez Perce Tribal Hatchery program is achieving its stated goals. The monitoring and evaluation action plan identifies the need for annual data collection and annual reporting. In addition, recurring 5-year program reviews will evaluate emerging trends and aid in the determination of the effectiveness of the NPTH program with recommendations to improve the program's implementation. This report covers the Migratory Year (MY) 2007 period of the NPTH Monitoring & Evaluation (M&E) program. There are three NPTH spring Chinook salmon treatment streams: Lolo Creek, Newsome Creek, and Meadow Creek. In 2007, Lolo Creek received 140,284 Brood Year (BY) 2006 acclimated pre-smolts at an average weight of 34.9 grams per fish, Newsome Creek received 77,317 BY 2006 acclimated pre-smolts at an average of 24.9 grams per fish, and Meadow Creek received 53,425 BY 2006 direct stream release parr at an average of 4.7 grams per fish. Natural and hatchery origin spring Chinook salmon pre-smolt emigrants were monitored from September - November 2006 and smolts from March-June 2007. Data on adult returns were collected from May-September. A suite of performance measures were calculated including total adult and spawner escapement, juvenile production, and survival probabilities. These measures were used to evaluate the effectiveness of supplementation and provide information on the capacity of the natural environment to assimilate and support supplemented salmon populations.

The Yakima River Spring Chinook Salmon Supplementation Project in Washington State is currently one of the most ambitious efforts to enhance a natural salmon population in the United States. Over the past five years we have conducted research to characterize the developmental physiology of naturally- and hatchery-reared wild progeny spring chinook salmon (Oncorhynchus tshawytscha) in the Yakima River basin. Fish were sampled at the main hatchery in Cle Elum, at remote acclimation sites and, during smolt migration, at downstream dams. Throughout these studies the maturational state of all fish was characterized using combinations of visual and histological analysis of testes, gonadosomatic index (GSI), and measurement of plasma 11-ketotestosterone (11-KT). We established that a plasma 11-KT threshold of 0.8 ng/ml could be used to designate male fish as either immature or precociously maturing approximately 8 months prior to final maturation (1-2 months prior to release as 'smolts'). Our analyses revealed that 37-49% of the hatchery-reared males from this program undergo precocious maturation at 2 years of age and a proportion of these fish appear to residualize in the upper Yakima River basin throughout the summer. An unnaturally high incidence of precocious male maturation may result in loss of potential returning anadromous adults, skewing of female: male sex ratios, ecological, and genetic impacts on wild populations and other native species. Precocious male maturation is significantly influenced by growth rate at specific times of year and future studies will be conducted to alter maturation rates through seasonal growth rate manipulations.

The Umatilla Basin Anadromous Fish Habitat Enhancement Project is funded under the Northwest Power Planning Council's Columbia River Basin Fish and Wildlife Program, Section 7.6-7.8 and targets the improvement of water quality and restoration of riparian areas, holding, spawning and rearing habitats of steelhead, spring and fallchinook and coho salmon. The project focused on implementing cooperative instream and riparian habitat improvements on private lands on the Umatilla Indian Reservation (hereafter referred to as Reservation) from April 1, 1988 to March 31, 1992. These efforts resulted in enhancement of the lower l/4 mile of Boston Canyon Creek, the lower 4 river miles of Meacham Creek and 3.2 river miles of the Umatilla River in the vicinity of Gibbon, Oregon. In 1993, the project shifted emphasis to a comprehensive watershed approach, consistent with other basin efforts, and began to identify upland and riparian watershed-wide causative factors impacting fisheries habitat and natural fisheries production capabilities throughout the Umatilla River Watershed. During the 1994-95 project period, a one river mile demonstration project was implemented on two privately owned properties on Wildhorse Creek. This was the first watershed improvement project to be implemented by the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) off of the Reservation. Four 15 year riparian easements and two right-of-way agreements were secured for enhancement of one river mile on Wildhorse Creek and l/2 river mile on Meacham Creek. Enhancements implemented between river mile (RM) 9.5 and RM 10.5 Wildhorse Creek included: (1) installation of 1.43 miles of smooth wire high tensile fence line and placement of 0.43 miles of fence posts and structures to restrict livestock from the riparian corridor, (2) construction of eighteen sediment retention structures in the stream channel to speed riparian recovery by elevating the stream grade, slowing water velocities and depositing sediments onto streambanks to provide substrate for revegetation, and (3) revegetation of the stream corridor, terraces and adjacent pasture areas with 644 pounds of native grass seed (when commercially available) or close species equivalents and 4,000 native riparian shrub/tree species to assist in floodplain recovery, stream channel stability and filtering of sediments during high flow periods. Three hundred pounds of native grass/legume seed (including other grasses/legumes exhibiting native species characteristics) were broadcast in existing Boston Canyon Creek, Meacham Creek and Umatilla River project areas. The addition of two properties into the project area between RM 4.25 and RM 4.75 Meacham Creek during the 1995-96 work period will provide nearly complete project coverage of lower Meacham Creek corridor areas on the Reservation. Water quality monitoring continued for temperature and turbidity throughout the upper Umatilla River Watershed. Survey of cross sections and photo documentation of riparian recovery within the project areas provided additional baseline data. Physical habitat surveys continued to be conducted to characterize habitat quality and to quantify various habitat types by area. This information will be utilized to assist in identification of habitat deficient areas within the watershed in which to focus habitat restoration efforts. These efforts were coordinated with the CTUIR Umatilla Basin Natural Production Monitoring and Evaluation (UBNPME) Project. Poor land use practices, which have altered natural floodplain dynamics and significantly reduced or eliminated fisheries habitat, continued to be identified in the Mission Creek Subbasin. Complied data is currently being incorporated into a data layer for a Geographic Information System (GIS) data base. This effort is being coordinated with the Natural Resource Conservation Service (NRCS). Community outreach efforts and public education opportunities continued during the reporting period. CTUIR cooperatively sponsored a bioengineering workshop on February 23, 1995 with the Oregon De

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

Note: This page contains sample records for the topic "river fall chinook" from the National Library of EnergyBeta (NLEBeta).
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The Nez Perce Tribe, through funding provided by the Bonneville Power Administration, has implemented a small scale chinook salmon supplementation program on Johnson Creek, a tributary in the South Fork of the Salmon River, Idaho. The Johnson Creek Artificial Propagation Enhancement project was established to enhance the number of threatened Snake River summer chinook salmon (Oncorhynchus tshawytscha) returning to Johnson Creek through artificial propagation. Adult chinook salmon trapping, broodstock selection, and spawning was first implemented in 1998, did not occur in 1999, and was resumed in 2000. A total of 152 salmon were trapped in Johnson Creek in 2000, of which 73 (25 males, 16 females, and 32 jacks) fish were transported to Idaho Fish and Game=s South Fork Salmon River adult holding and spawning facility for artificial propagation purposes. The remaining 79 (29 males, 16 females, and 24 jacks) fish were released above the weir to spawn naturally. A total of 65,060 green eggs were taken from 16 female salmon and transported to the McCall Fish Hatchery for incubation and rearing. Egg counts indicated an average eye-up rate of 86.0% for 55,971 eyed eggs. Average fecundity for Johnson Creek females was 4,066 eggs per female. Juvenile fish were reared indoors at the McCall Fish Hatchery through November 2001. These fish were transferred to outdoor rearing facilities in December 2001 where they remained until release in March 2002. All of these fish were marked with Coded Wire Tags and Visual Implant Elastomer tags. In addition 9,987 were also PIT tagged. Hand counts provided by marking crews were used to amend the number of juvenile salmon released from the original egg count. A total of 57,392 smolts were released into a temporary acclimation channel in Johnson Creek on March 18, 19, 20, 2002. These fish were held in this facility until a fish screen was removed on March 22, 2002 and the fish were allowed to emigrate.

In spite of an intensive management effort, chinook salmon (Oncorhynchus tshawytscha) and steelhead (Oncorhynchus mykiss) populations in the Northwest have not recovered and are currently listed as threatened species under the Endangered Species Act. In addition to the loss of diversity from stocks that have already gone extinct, decreased genetic diversity resulting from genetic drift and inbreeding is a major concern. Reduced population and genetic variability diminishes the environmental adaptability of individual species and entire ecological communities. The Nez Perce Tribe (NPT), in cooperation with Washington State University and the University of Idaho, established a germplasm repository in 1992 in order to preserve the remaining salmonid diversity in the region. The germplasm repository provides long-term storage for cryopreserved gametes. Although only male gametes can be cryopreserved, conserving the male component of genetic diversity will maintain future management options for species recovery. NPT efforts have focused on preserving salmon and steelhead gametes from the major river subbasins in the Snake River basin. However, the repository is available for all management agencies to contribute gamete samples from other regions and species. In 2002 a total of 570 viable semen samples were added to the germplasm repository. This included the gametes of 287 chinook salmon from the Lostine River, Catherine Creek, upper Grande Ronde River, Imnaha River (Lookingglass Hatchery), Lake Creek, South Fork Salmon River, Johnson Creek, Big Creek, Capehorn Creek, Marsh Creek, Pahsimeroi River (Pahsimeroi Hatchery), and upper Salmon River (Sawtooth Hatchery) and the gametes of 280 steelhead from the North Fork Clearwater River (Dworshak Hatchery), Fish Creek, Little Sheep Creek, Pahsimeroi River (Pahsimeroi Hatchery) and Snake River (Oxbow Hatchery). In addition, gametes from 60 Yakima River spring chinook and 34 Wenatchee River coho salmon were added to the repository by Washington Department of Fish and Wildlife and Columbia River Intertribal Fish Commission, respectively. To date, a total of 3,928 Columbia River salmon and steelhead gamete samples and three Kootenai River white sturgeon are preserved in the repository. Samples are stored in independent locations at the University of Idaho (UI) and Washington State University (WSU).

Tell President Obama About Coal River Mountain Coal River Mountain and the Heathrow Airport runway remind me how important it is to keep our eye on the ball. Coal River Mountain is the site of an absurdity. I learned about Coal River Mountain from students at Virginia Tech last fall. They were concerned

The Comparative Survival Rate Study (CSS) is a multi-year program of the fishery agencies and tribes to measure the smolt-to-adult survival rates of hatchery spring and summer chinook at major production hatcheries in the Snake River basin and at selected hatcheries in the lower Columbia River. The CSS also compares the smolt-to-adult survival rates for Snake River basin chinook that were transported versus those that migrated in-river to below Bonneville Dam. Estimates of smolt-to-adult survival rates will be made both from Lower Granite Dam back to Lower Granite Dam (upriver stocks) and from the hatchery back to the hatchery (upriver and downriver stocks). This status report covers the first three migration years, 1996 to 1998, of the study. Study fish were implanted with a PIT (Passive Integrated Transponder) tag which allows unique identification of individual fish. Beginning in 1997, a predetermined proportion of the PIT tagged study fish in the collection/bypass channel at the transportation sites, such as Lower Granite and Little Goose dams, was purposely routed to the raceways for transportation and the rest was routed back to the river. Two categories of in-river migrating fish are used in this study. The in-river group most representative of the non-tagged fish are fish that migrate past Lower Granite, Little Goose, and Lower Monumental dams undetected in the bypass systems. This is because all non-tagged fish collected at these three dams are currently being transported. The other in-river group contains those fish remaining in-river below Lower Monumental Dam that had previously been detected at one or more dams. The number of fish starting at Lower Granite dam that are destined to one of these two in-river groups must be estimated. The Jolly-Seber capture-recapture methodology was used for that purpose. Adult (including jacks) study fish returning to the hatcheries in the Snake River basin were sampled at the Lower Granite Dam adult trap. There the PIT tag was recorded along with a measurement of length, a determination of sex, and a scale sample. The returns to the hatchery rack were adjusted for any sport and tribal harvest to provide an estimate of total return to the hatchery. Adult and jack return data from return years 1997 through 1999 are covered in this status report. Only the returns from the 1996 migration year are complete. A very low overall average of 0.136% survival rate from Lower Granite Dam and back to Lower Granite Dam was estimated for the 1996 migrants. The outcome expected for the 1997 migrants is much better. With one year of returns still to come, the overall average Lower Granite Dam to Lower Granite Dam survival rate is 0.666%, with the McCall Hatchery and Imnaha Hatchery fish already producing return rates in excess of 1%. With 635 returning adults (plus jacks) from the 1997 migration year detected at Lower Granite Dam to date, and one additional year of returns to come, there will be a large sample size for statistically testing differences in transportation versus in- river survival rates next year. From the conduct of this study over a series of years, in addition to obtaining estimates of smolt-to-adult survival rates, we should be able to investigate what factors may be causing differences in survival rates among the various hatchery stocks used in this study.

Bonneville Power Administration Bonneville Power Administration S-1 Executive Summary S.1 Chapter 1: Purpose of and Need for Action The Confederated Tribes and Bands of the Yakama Nation (YN) have requested funding from the Bonneville Power Administration (BPA) to modify the existing Lyle Falls Fishway located on the lower Klickitat River in Klickitat County, Washington. This fishway is owned by the Washington Department of Fish and Wildlife (WDFW) and operated by the YN. The US Forest Service (USFS) administers portions of the Klickitat River and its corridor under the National Wild and Scenic Rivers Act). Lyle Falls, at river mile (RM) 2.2 of the Klickitat River, prevents some upstream migrating fish from reaching the upper watershed, especially when flows are low. The

During 2004, researchers from U.S. Geological Survey's Columbia River Research Laboratory (USGS-CRRL) collected temperature, flow, and habitat data to characterize physical habitat condition and variation within and among tributaries and mainstem sections in the Wind River subbasin. Juvenile salmonid population surveys were conducted within select study areas throughout the subbasin. We expanded our survey coverage of the mainstem Wind River to a reach in the vicinity of Carson National Fish Hatchery to assess effects of non-indigenous Chinook on native steelhead. These efforts add to a database of habitat and fish data collected in the Wind River since 1996. This research contributes to the Wind River Restoration Project, which includes active stream habitat restoration and monitoring of adult and juvenile steelhead populations. We maintained a network of 32 thermographs in the Wind River subbasin during 2004. Additionally, Underwood Conservation District provided us with data from seven thermographs that they maintained during 2004. Thermograph data are identifying areas with chronic high water temperatures and stream sections where high rates of warming are occurring. During 2004, water temperatures at 26 thermograph sites exceeded the 16 C limit for surface waters set by the Washington Department of Ecology. Water temperatures exceeded 20 C at five sites in the Trout Creek watershed. Our thermograph dataset includes information from as early as 1996 at some sites and has become a valuable long-term dataset, which will be crucial in determining bioenergetic relationships with habitat and life-histories. We have monitored salmonid populations throughout the Wind River subbasin by electrofishing and snorkeling. We electrofished four stream sections for population estimates during 2004. In these sections, and others where we simply collected fish without a population estimate, we tagged juvenile steelhead and Chinook salmon with Passive Integrated Transponder (PIT) tags to track growth and movement of individuals. We snorkeled nine stream sections during 2004. Juvenile steelhead populations have varied greatly between streams and between years. Numbers of age-0 steelhead have increased substantially since 2000 within the MINE reach (rkm 35.0-40.0) section of the upper Wind River. Because of potential negative interactions with steelhead, naturally spawned populations of introduced juvenile Chinook salmon are of concern in the mainstem of the Wind River. During 2004, we deployed over 3,000 PIT tags in the Wind River subbasin, primarily in juvenile steelhead, but also in juvenile Chinook. We are compiling a dataset of recapture information on these tagged fish as well as interrogation information from Bonneville Dam and other sites. The habitat and fish data collected have been used in Ecosystem Diagnosis and Treatment modeling efforts, the Wind River Subbasin Plan, and the Total Maximum Daily Load report from Washington Department of Ecology. Continued monitoring of changes in habitat, combined with data on fish populations, will help guide planning efforts of land and fish managers. As long-term active and passive restoration actions are implemented in the Wind River and its tributaries, these data will provide the ability to measure change. Because the Wind River subbasin has no steelhead hatchery or supplementation, these data will be useful to compare population trends in subbasins with hatchery or supplementation management.

The purpose of this study was to evaluate survival model assumptions associated with a concurrent study - Acoustic Telemetry Evaluation of Dam Passage Survival and Associated Metrics at John Day, The Dalles, and Bonneville Dams, 2010 by Thomas Carlson and others in 2010 - in which the Juvenile Salmonid Acoustic Telemetry System (JSATS) was used to estimate the survival of yearling and subyearling Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) migrating through the Federal Columbia River Power System (FCRPS). The micro-acoustic transmitter used in these studies is the smallest acoustic transmitter model to date (12 mm long x 5 mm wide x 4 mm high, and weighing 0.43 g in air). This study and the 2010 study by Carlson and others were conducted by researchers from the Pacific Northwest National Laboratory and the University of Washington for the U.S. Army Corps of Engineers, Portland District, to meet requirements set forth by the 2008 FCRPS Biological Opinion. In 2010, we compared survival, tag burden, and tag expulsion in five spring groups of yearling Chinook salmon (YCH) and steelhead (STH) and five summer groups of subyearling Chinook salmon (SYC) to evaluate survival model assumptions described in the concurrent study. Each tagging group consisted of approximately 120 fish/species, which were collected and implanted on a weekly basis, yielding approximately 600 fish total/species. YCH and STH were collected and implanted from late April to late May (5 weeks) and SYC were collected and implanted from mid-June to mid-July (5 weeks) at the John Day Dam Smolt Monitoring Facility. The fish were collected once a week, separated by species, and assigned to one of three treatment groups: (1) Control (no surgical treatment), (2) Sham (surgical implantation of only a passive integrated transponder [PIT] tag), and (3) Tagged (surgical implantation of JSATS micro-acoustic transmitter [AT] and PIT tags). The test fish were held for 30 days in indoor circular tanks at the Bonneville Dam Juvenile Monitoring Facility. Overall mortality ranged weekly from 45 to 72% for YCH, 55 to 83% for STH, and 56 to 84% for SYC. The high background mortality in all groups and species made it difficult to discern tag effects. However, for YCH, STH, and SYC, the Tagged treatment groups had the highest overall mean mortality - 62%, 79%, and 76%, respectively. Fungal infections were found on 35% of all fish. Mean tag burden for the Tagged treatment group was relatively low for YCH (1.7%) and moderate for SYC (4.2%), while STH had a very low mean tag burden (0.7%). Tag burden was significantly higher in the Tagged treatment group for all species when compared to the Sham treatment group because of the presence of two tags. Surgeon performance did not contribute to the difference in mortality between the Sham and Tagged treatment groups. Tag expulsion from fish that survived to the end of the 30-day experiment was low but occurred in all species, with only two PIT tags and one AT lost, one tag per species. The high background mortality in this experiment was not limited to a treatment, temperature, or month. The decreased number of surviving fish influenced our experimental results and thus analyses. For future research, we recommend that a more natural exposure to monitor tag effects and other factors, such as swimming ability and predator avoidance, be considered to determine the effects of AT- and PIT- implantation on fishes.

In the late 1990s, the Confederated Tribes of the Umatilla Indian Reservation, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife, along with many other agencies, began implementing fisheries restoration activities in the Walla Walla Basin. An integral part of these efforts is to alleviate the inadequate fish migration conditions in the basin. The migration concerns are being addressed by removing diversion structures, constructing fish passage facilities, implementing minimum instream flow requirements, and providing trap and haul efforts when needed. The objective of the Walla Walla River Fish Passage Operations Project is to increase the survival of migrating adult and juvenile salmonids in the Walla Walla River basin. The project is responsible for coordinating operation and maintenance of ladders, screen sites, bypasses, trap facilities, and transportation equipment. In addition, the project provides technical input on passage criteria and passage and trapping facility design and operation. Operation of the various passage facilities and passage criteria guidelines are outlined in an annual operations plan that the project develops. During the 2003-2004 project year, there were 379 adult summer steelhead (Oncorhynchus mykiss), 36 adult bull trout (Salvelinus confluentus); 108 adult and 3 jack spring chinook (O. tshawytscha) enumerated at the Nursery Bridge Dam fishway video counting window between December 21, 2003, and June 30, 2004. Summer steelhead and spring chinook were observed moving upstream while bull trout were observed moving both upstream and downstream of the facility. In addition, the old ladder trap was operated by the WWBNPME project in order to radio tag spring chinook adults. A total of 2 adult summer steelhead, 4 bull trout, and 23 adult spring chinook were enumerated at the west ladder at Nursery Bridge Dam during the trapping operations between May 6 and May 23, 2004. Operation of the Little Walla Walla River juvenile trap for trap and haul purposes was not necessary this year. The project transported adult spring chinook from Threemile Dam to the South Fork Walla Walla Brood Holding Facility. A total of 239 spring chinook were outplanted in August for natural spawning in the basin.

Bronson, James P. (Confederated Tribes of the Umatilla Indian Reservation, Department of Natural Resources, Pendleton, OR)

Bull trout (Salvelinus confluentus) are native to many tributaries of the Snake River in southeast Washington. The Washington Department of Wildlife (WDW) and the American Fisheries Society (AFS) have identified bull trout as a species of special concern which means that they may become threatened or endangered by relatively, minor disturbances to their habitat. Steelhead trout/rainbow trout (Oncorhynchus mykiss) and spring chinook salmon (O.tshawytscha) are also native to several tributaries of the Snake river in southeast Washington. These species of migratory fishes are depressed, partially due to the construction of several dams on the lower Snake river. In response to decreased run size, large hatchery program were initiated to produce juvenile steelhead and salmon to supplement repressed tributary stocks, a practice known as supplementation. There is a concern that supplementing streams with artificially high numbers of steelhead and salmon may have an impact on resident bull trout in these streams. Historically, these three species of fish existed together in large numbers, however, the amount of high-quality habitat necessary for reproduction and rearing has been severely reduced in recent years, as compared to historic amounts. The findings of the first year of a two year study aimed at identifying species interactions in southeast Washington streams are presented in this report. Data was collected to assess population dynamics; habitat utilization and preference, feeding habits, fish movement and migration, age, condition, growth, and the spawning requirements of bull trout in each of four streams. A comparison of the indices was then made between the study streams to determine if bull trout differ in the presence of the putative competitor species. Bull trout populations were highest in the Tucannon River (supplemented stream), followed by Mill Creek (unsupplemented stream). Young of the year bull trout utilized riffle and cascade habitat the most in all four streams. Juvenile bull trout utilized scour pool and run habitat the most in all four streams. YOY bull trout preferred plunge pool and scour pool habitat, as did juvenile bull trout in all four streams. These data show that while in the presence of the putative competitors, bull trout prefer the same habitat as in the absence of the putative competitors. Juvenile bull trout preferred mayflies and stoneflies in Mill Creek, while in the presence of the competitor species they preferred caddisflies, stoneflies, and Oligochaeta. It is felt that this difference is due to the differences in food items available and not species interactions, bull trout consume what is present. Adult bull trout were difficult to capture, and therefore it was difficult to determine the migratory habits in the Tucannon River. It is recommended that future studies use radio telemetry to determine the migratory habitat of these fish. The age, condition, and growth rates of bull trout differed only minimally between streams, indicating that if competitive interactions are occurring between these species it is not reflected by: (1) the length at age of bull trout; (2) the length-weight relationship of bull trout; or (3) the rate of growth of bull trout. The spawning habits of bull trout and spring chinook salmon are similar in the Tucannon River, however it was found that they spawn in different river locations. The salmon spawn below river kilometer 83, while 82% of bull trout spawn above that point. The peak of spawning for salmon occurred 10 days before the peak of bull trout spawning, indicating that very little competition for spawning locations occurs between these species in the Tucannon River. Future species interactions study recommendations include the use of electrofishing to enumerate bull trout populations, snorkeling to identify micro-habitat utilization, seasonal diet analysis, and radio transmitters to identify seasonal migration patterns of bull trout.

This Appendix C of the Final Environmental Impact Statement for the Columbia River System discusses impacts on andromous fish and juvenile fish transportation. The principal andromous fish in the Columbia basin include salmonid species (Chinook, coho, and sockeye salmon, and steelhead) and nonsalmoinid andromous species (sturgeon, lamprey, and shad). Major sections in this document include the following: background, scope and process; affected environment for salmon and steelhead, shaded, lamprey, sturgeon; study methods; description of alternatives: qualitative and quantitative findings.

To facilitate preparing Biological Assessments of proposed channel maintenance projects, the Portland District of the U.S. Army Corps of Engineers contracted the Pacific Northwest National Laboratory to consolidate and synthesize available information about the use of the lower Columbia River and estuary by juvenile anadromous salmonids. The information to be synthesized included existing published documents as well as data from five years (2004-2008) of acoustic telemetry studies conducted in the Columbia River estuary using the Juvenile Salmon Acoustic Telemetry System. For this synthesis, the Columbia River estuary includes the section of the Columbia River from Bonneville Dam at river kilometer (Rkm) 235 downstream to the mouth where it enters the Pacific Ocean. In this report, we summarize the seasonal salmonid presence and migration patterns in the Columbia River estuary based on information from published studies as well as relevant data from acoustic telemetry studies conducted by NOAA Fisheries and the Pacific Northwest National Laboratory (PNNL) between 2004 and 2008. Recent acoustic telemetry studies, conducted using the Juvenile Salmon Acoustic Telemetry System (JSATS; developed by the Portland District of the U.S. Army Corps of Engineers), provided information on the migratory behavior of juvenile steelhead (O. mykiss) and Chinook salmon in the Columbia River from Bonneville Dam to the Pacific Ocean. In this report, Section 2 provides a summary of information from published literature on the seasonal presence and migratory behavior of juvenile salmonids in the Columbia River estuary and plume. Section 3 presents a detailed synthesis of juvenile Chinook salmon and steelhead migratory behavior based on use of the JSATS between 2004 and 2008. Section 4 provides a discussion of the information summarized in the report as well as information drawn from literature reviews on potential effects of channel maintenance activities to juvenile salmonids rearing in or migrating through the Columbia River estuary and plume.

This report presents the findings of the independent audit of the Lyons Ferry Hatchery (Summer Steelhead). Lyons Ferry Hatchery is located downstream of the confluence of the Palouse and Snake rivers, about 7 miles west of Starbuck, Washington. The hatchery is used for adult collection of fallchinook and summer steelhead, egg incubation of fallchinook, spring chinook, steelhead, and rainbow trout and rearing of fallchinook, spring chinook, summer steelhead, and rainbow trout. The audit was conducted in April 1996 as part of a two-year effort that will include 67 hatcheries and satellite facilities located on the Columbia and Snake River system in Idaho, Oregon, and Washington. The hatchery operating agencies include the US Fish and Wildlife Service, Idaho Department of Fish and Game, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife.

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

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they are not comprehensive nor are they the most current set.
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In 2001 the Idaho Fisheries Resource Office continued as a cooperator on the Salmon Supplementation Studies in Idaho Rivers (ISS) project on Pete King and Clear creeks. Data relating to supplementation treatment releases, juvenile sampling, juvenile PIT tagging, brood stock spawning and rearing, spawning ground surveys, and snorkel surveys were used to evaluate project data points and augment past data. Due to low adult spring Chinook returns to Kooskia National Fish Hatchery (KNFH) in brood year 1999 there was no smolt supplementation treatment release into Clear Creek in 2001. A 17,014 spring Chinook parr supplementation treatment (containing 1000 PIT tags) was released into Pete King Creek on July 24, 2001. On Clear Creek, there were 412 naturally produced spring Chinook parr PIT tagged and released. Using juvenile collection methods, Idaho Fisheries Resource Office staff PIT tagged and released 320 naturally produced spring Chinook pre-smolts on Clear Creek, and 16 natural pre-smolts on Pete King Creek, for minimum survival estimates to Lower Granite Dam. There were no PIT tag detections of brood year 1999 smolts from Clear or Pete King creeks. A total of 2261 adult spring Chinook were collected at KNFH. Forty-three females were used for supplementation brood stock, and 45 supplementation (ventral fin-clip), and 45 natural (unmarked) adults were released upstream of KNFH to spawn naturally. Spatial and temporal distribution of 37 adults released above the KNFH weir was determined through the use of radio telemetry. On Clear Creek, a total of 166 redds (8.2 redds/km) were observed and data was collected from 195 carcasses. Seventeen completed redds (2.1 redds/km) were found, and data was collected data from six carcasses on Pete King Creek.

The impacts of pressure on juvenile salmon who pass through the turbines of hydroelectric dams while migrating downstream on the Columbia and Snake rivers has not been well understood, especially as these impacts relate to injury to the fish's swim bladder. The laboratory studies described here were conducted by Pacific Northwest National Laboratory for the US Army Corps of Engineers Portland District at PNNL's fisheries research laboratories in 2004 to investigate the impacts of simulated turbine passage pressure on fish permitted to achieve neutral buoyancy at pressures corresponding to depths at which they are typically observed during downstream migration. Two sizes of juvenile Chinook salmon were tested, 80-100mm and 125-145mm total length. Test fish were acclimated for 22 to 24 hours in hyperbaric chambers at pressures simulating depths of 15, 30, or 60 ft, with access to a large air bubble. High rates of deflated swim bladders and mortality were observed. Our results while in conclusive show that juvenile salmon are capable of drawing additional air into their swimbladder to compensate for the excess mass of implanted telemetry devices. However they may pay a price in terms of increased susceptibility to injury, predation, and death for this additional air.

In the late 1990's, the Confederated Tribes of the Umatilla Indian Reservation, Oregon Department of Fish and Wildlife, and Washington Department of Fish and Wildlife, along with many other agencies, began implementing fisheries restoration activities in the Walla Walla Basin. An integral part of these efforts is to alleviate the inadequate fish migration conditions in the basin. The migration concerns are being addressed by removing diversion structures, constructing fish passage facilities, implementing minimum instream flow requirements, and initiating trap and haul efforts. The objective of the Walla Walla River Fish Passage Operations Project is to increase the survival of migrating adult and juvenile salmonids in the Walla Walla River basin. The project is responsible for coordinating operation and maintenance of ladders, screen sites, bypasses, trap facilities, and transportation equipment. In addition, the project provides technical input on passage criteria and passage and trapping facility design and operation. Operation of the various passage facilities and passage criteria guidelines are outlined in an annual operations plan that the project develops. During the 2002-2003 project year, there were 545 adult summer steelhead (Oncorhynchus mykiss), 29 adult bull trout (Salvelinus confluentus); 1 adult and 1 jack spring chinook (O. tshawytscha) enumerated at the Nursery Bridge Dam fishway adult trap between January 1 and June 23, 2003. Summer steelhead and spring chinook were observed moving upstream while bull trout were observed moving both upstream and downstream of the facility. Operation of the Little Walla Walla River juvenile trap for trap and haul purposes was not necessary this year. The project transported 21 adult spring chinook from Ringold Springs Hatchery and 281 from Threemile Dam to the South Fork Walla Walla Brood Holding Facility. Of these, 290 were outplanted in August for natural spawning in the basin.

2-04 2-04 Preliminary Notice of Violation, Savannah River Nuclear Solutions, LLC - WEA-2012-04 November 9, 2012 Issued to Savannah River Nuclear Solutions (SRNS), LLC, related to a Worker Fall from a Scaffold in the K-Area Complex at the Savannah River Site This letter refers to the U.S. Department of Energy (DOE) Office of Health, Safety and Security's Office of Enforcement and Oversight investigation into the facts and circumstances associated with a worker fall from a Tele-TowerÂ® Adjustable Work Platform in the K-Area Complex at the Savannah River Site on July 1, 2011. The results of DOE's investigation were provided to Savannah River Nuclear Solutions, LLC (SRNS) in an investigation report dated May 8, 2012. An enforcement conference was held on June 27, 2012, with you and members of your staff to discuss the

In 2005, the National Marine Fisheries Service and the University of Washington completed the thirteenth year of a study to estimate survival and travel time of juvenile salmonids Oncorhynchus spp. passing through dams and reservoirs on the Snake and Columbia Rivers. All estimates were derived from detections of fish tagged with passive integrated transponder tags (PIT tags). We PIT tagged and released a total of 18,439 hatchery steelhead, 5,315 wild steelhead, and 6,964 wild yearling Chinook salmon at Lower Granite Dam in the Snake River. In addition, we utilized fish PIT tagged by other agencies at traps and hatcheries upstream from the hydropower system and at sites within the hydropower system in both the Snake and Columbia Rivers. PIT-tagged smolts were detected at interrogation facilities at Lower Granite, Little Goose, Lower Monumental, Ice Harbor, McNary, John Day, and Bonneville Dams and in the PIT-tag detector trawl operated in the Columbia River estuary. Survival estimates were calculated using a statistical model for tag-recapture data from single release groups (the ''single-release model''). Primary research objectives in 2005 were: (1) Estimate reach survival and travel time in the Snake and Columbia Rivers throughout the migration period of yearling Chinook salmon O. tshawytscha and steelhead O. mykiss. (2) Evaluate relationships between survival estimates and migration conditions. (3) Evaluate the survival estimation models under prevailing conditions. This report provides reach survival and travel time estimates for 2005 for PIT-tagged yearling Chinook salmon (hatchery and wild), hatchery sockeye salmon O. nerka, hatchery coho salmon O. kisutch, and steelhead (hatchery and wild) in the Snake and Columbia Rivers. Additional details on the methodology and statistical models used are provided in previous reports cited here.

The cytoskeletal protein alpha II-spectrin has specifi c neurodegenerative mechanisms that allow the necrotic (injury-induced) and apoptotic (non-injury-induced) pathways of proteolysis to be differentiated in an immunoblot. Consequently, ?II-spectrin breakdown products (SBDPs) are potential biomarkers for diagnosing traumatic brain injury (TBI). The purpose of the following investigation, consisting of two studies, was to evaluate the utility of the spectrin biomarker in diagnosing TBI in fi sh that travel through hydroelectric dams in the Columbia and Snake Rivers. The fi rst study used hyperbaric pressure chambers to simulate the pressure changes that affect fi sh during passage through a Federal Columbia River Power System (FCRPS) Kaplan turbine. The second study tested the effect of a removable spillway weir (RSW) on the passage of juvenile chinook (Oncorhynchus tshawytscha). This study was conducted in tandem with a balloon-tag study by the U.S. Army Corps of Engineers. Brain samples from fi sh were collected and analyzed using an immunoblot for SBDPs, and imaging software was used to quantify the protein band density and determine the ratio of cleaved protein to total protein. The biomarker analyses found higher SBDP expression levels in fi sh that were exposed to lower pressure nadirs and fi sh that passed through the RSW at a deep orientation. In general, the incidence of injuries observed after treatment positively correlated with expression levels, suggesting that the biomarker method of analysis is comparable to traditional methods of injury assessment. It was also found that, for some treatments, the 110 kDa spectrin fragment (SBDP 110) correlated more strongly with necrotic head injury incidence and mortality rates than did the total cleaved protein or the 120 kDa fragment. These studies will be informative in future decisions regarding the design of turbines and fi sh passage structures in hydroelectric dams and will hopefully contribute to the development of faster and more accurate techniques for diagnosing TBI in fi sh.

The purpose of this study was to estimate dam passage and route specific survival rates for subyearling Chinook salmon smolts to a primary survival-detection array located 81 km downstream of the dam, evaluate a BGS located in the B2 forebay, and evaluate effects of two spill treatments. The 2010 study also provided estimates of forebay residence time, tailrace egress time, spill passage efficiency (SPE), and spill + B2 Corner Collector (B2CC) efficiency, as required in the Columbia Basin Fish Accords. In addition, the study estimated forebay passage survival and survival of fish traveling from the forebay entrance array, through the dam and downstream through 81 km of tailwater.

The purpose of this study was to estimate dam passage and route specific survival rates for subyearling Chinook salmon smolts to a primary survival-detection array located 81 km downstream of the dam, evaluate a BGS located in the B2 forebay, and evaluate effects of two spill treatments. The 2010 study also provided estimates of forebay residence time, tailrace egress time, spill passage efficiency (SPE), and spill + B2 Corner Collector (B2CC) efficiency, as required in the Columbia Basin Fish Accords. In addition, the study estimated forebay passage survival and survival of fish traveling from the forebay entrance array, through the dam and downstream through 81 km of tailwater.

RiverRiver Nature Bulletin No. 22 July 7, 1945 Forest Preserve District of Cook County Clayton F. Smith, President Roberts Mann, Superintendent of Conservation OUR RIVER The people of Cook County are missing a bet. They are not using their DesPlaines River. The other day we took a boat trip down that river from Lake County to Lawndale Avenue in Summit. It being a week day, we saw few people other than an occasional fisherman or pairs of strolling boys. Except for a bridge now and then, there were no signs or sounds of civilization. Chicago might have been a thousand miles away. We rested. There was isolation. There was peace. Once in a while a heron flew ahead of us; or a squirrel scampered up a tree; once we saw a family of young muskrats playing around the entrance to their den in the bank; twice we saw and heard a wood duck; again and again big fish plowed ripples surging ahead of us. It was shady and cool and still beneath the arching trees. We thought of the centuries this river had traveled. We were babes nuzzling again at the breast of Mother Nature.

River Steamboats River Steamboats Nature Bulletin No. 628-A February 12, 1977 Forest Preserve District of Cook County George W. Dunne, President Roland F. Eisenbeis, Supt. of Conservation RIVER STEAMBOATS The westward migration of the pioneer settlers and the rapid growth of agriculture, commerce and industry in the Middle West is in large part the story of water transportation on our inland waterways. The two main water routes were the chain of Great Lakes on the north and the Ohio River on the south. Sailing vessels carrying hundreds of tons were able to navigate on the Great Lakes almost as freely as on the ocean. Also, on the Ohio and Mississippi rivers heavy loads could be floated downstream from Pittsburgh to New Orleans -- almost 2000 miles. But boats had to be hauled back upstream by manpower -- grueling labor, stretching over weeks or months to move a few tons a few hundred miles. The coming of the steamboat a century and a half ago changed all this.

During the winter months of 1979, an Active Scattering Aerosol Spectrometer was operated in down-town Calgary to measure the effect of chinooks on the aerosol particle size distribution in the range 0.1–1.0 ?m. An Aerovironment Acoustic Sounder ...

The National Weather Service is charged by law with the responsibility of issuing forecasts and warnings of floods to the nation to help save lives and mitigate property damage. This mission falls under the authority of the River and Flood ...

Sample records for river fall chinook from the National Library of Energy Beta (NLEBeta)

Note: This page contains sample records for the topic "river fall chinook" from the National Library of EnergyBeta (NLEBeta).
While these samples are representative of the content of NLEBeta,
they are not comprehensive nor are they the most current set.
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The Hood River Production Program (HRPP) is a Bonneville Power Administration (BPA) funded program initiated as a mitigation measure for Columbia River hydrosystem effects on anadromous fish. The HRPP began in the early 1990s with the release of spring Chinook and winter steelhead smolts into the basin. Prior to implementation, co-managers, including the Confederated Tribes of the Warm Springs Reservation and the Oregon Department of Fish and Wildlife drafted the Hood River Production Master Plan (O'Toole and ODFW 1991a; O'Toole and ODFW 1991b) and the Pelton Ladder Master Plan (Smith and CTWSR 1991). Both documents were completed in 1991 and subsequently approved by the Council in 1992 and authorized through a BPA-led Environmental Impact Statement in 1996. In 2003, a 10-year programmatic review was conducted for BPA-funded programs in the Hood River (Underwood et al. 2003). The primary objective of the HRPP Review (Review) was to determine if program goals were being met, and if modifications to program activities would be necessary in order to meet or revise program goals. In 2003, an agreement was signed between PacifiCorp and resource managers to remove the Powerdale Dam (RM 10) and associated adult trapping facility by 2010. The HRPP program has been dependant on the adult trap to collect broodstock for the hatchery programs; therefore, upon the dam's removal, some sort of replacement for the trap would be needed to continue the HRPP. At the same time the Hood River Subbasin Plan (Coccoli 2004) was being written and prompted the co-managers to considered future direction of the program. This included revising the numerical adult fish objectives based on the assimilated data and output from several models run on the Hood River system. In response to the Review as well as the Subbasin Plan, and intensive monitoring and evaluation of the current program, the HRPP co-managers determined the spring Chinook program was not achieving the HRPP's defined smolt-to-adult (SAR) survival rate guidelines. The observed low SAR was due to precocity, straying, and incidence of BKD in the spring Chinook program; which ultimately led to the program's inability to achieve the subbasin's overly optimistic biological fish objectives. The summer steelhead hatchery program was not providing the fishery or population benefits anticipated and will be discontinued. The winter steelhead program was performing as planned and no changes are foreseen. This updated Master Plan addresses the several proposed changes to the existing HRPP, which are described.

Oregon Department of Fish and Wildlife; Confederated Tribes of the Warm Springs Reservation

Color of fall leaves Color of fall leaves Name: macmillan Status: N/A Age: N/A Location: N/A Country: N/A Date: Around 1993 Question: Why do leaves change color in the fall? Is the cold a contributing factor? What determines the ultimate color of a leaf? Is the change due to an absence of chlorophyll or the presence of something else? Replies: This will be a partial answer. The colors are due to chemicals called carotenes, the same chemicals that give rise to color of carrots. There are several and they have different colors. They are present in the leaves all of the time. We see them in the fall because the chlorophyll production in the leaves stops. I think it is due to the cooling, not directly the presence of freezing temperatures, it seems to depend on the plant. It would be a good experiment to see what events contribute to the changes. Clearly the amount of water in the plant contributes to the quality of the color.

50: Flambeau River BioFuels, Inc. Proposed Wood 50: Flambeau River BioFuels, Inc. Proposed Wood Biomass-to-Liquid Fuel Biorefinery, Park Falls, Wisconsin EA-1850: Flambeau River BioFuels, Inc. Proposed Wood Biomass-to-Liquid Fuel Biorefinery, Park Falls, Wisconsin Summary NOTE: This EA has been cancelled. This EA will evaluate the environmental impacts of a proposal to provide federal funding to Flambeau River Biofuels (FRB) to construct and operate a biomass-to-liquid biorefinery in Park Falls, Wisconsin, on property currently used by Flambeau Rivers Paper, LLC (FRP) for a pulp and paper mill and Johnson Timber Corporation's (JTC) Summit Lake Yard for timber storage. This project would design a biorefinery which would produce up to 1,150 barrels per day (bpd) of clean syncrude. The biorefinery would also supply

Recent decline of Pacific lamprey Lampetra tridentata adult migrants to the Snake River drainage has focused attention on the species. Adult Pacific lamprey counted passing Ice Harbor Dam fishway averaged 18,158 during 1962-69 and 361 during 1993-2000. Human resource manipulations in the Snake River and Clearwater River drainages have altered ecosystem habitat in the last 120 years, likely impacting the productive potential of Pacific lamprey habitat. Timber harvest, stream impoundment, road construction, grazing, mining, and community development have dominated habitat alteration in the Clearwater River system and Snake River corridor. Hydroelectric projects in the Snake River corridor impact juvenile/larval Pacific lamprey outmigrants and returning adults. Juvenile and larval lamprey outmigrants potentially pass through turbines, turbine bypass/collection systems, and over spillway structures at the four lower Snake River hydroelectric dams. Clearwater River drainage hydroelectric facilities have impacted Pacific lamprey populations to an unknown degree. The Pacific Power and Light Dam on the Clearwater River in Lewiston, Idaho, restricted chinook salmon Oncorhynchus tshawytscha passage in the 1927-1940 period, altering the migration route of outmigrating Pacific lamprey juveniles/larvae and upstream adult migrants (1927-1972). Dworshak Dam, completed in 1972, eliminated Pacific lamprey spawning and rearing in the North Fork Clearwater River drainage. Construction of the Harpster hydroelectric dam on the South Fork of the Clearwater River resulted in obstructed fish passage 1949-1963. Through Bonneville Power Administration support, the Idaho Department of Fish and Game continued investigation into the status of Pacific lamprey populations in Idaho's Clearwater River drainage in 2001. Trapping, electrofishing, and spawning ground redd surveys were used to determine Pacific lamprey distribution, life history strategies, and habitat requirements in the South Fork Clearwater River drainage. Forty-three sites in Red River, South Fork Clearwater River, and their tributaries were electrofished in 2001. Sampling yielded a total of 442 juvenile/larval Pacific lamprey. Findings indicate Pacific lamprey juveniles/larvae are not numerous or widely distributed. Pacific lamprey distribution in the South Fork of the Clearwater River drainage was confined to lower reaches of Red River and the South Fork Clearwater River.

Work undertaken in 2008 included: (1) Seven new fence projects were completed thereby protecting approximately 10.97 miles of streams with 16.34 miles of riparian fence; (2) Renewal of one expired lease was completed thereby continuing to protect 0.75 miles of stream with 1.0 mile of riparian fence. (3) Maintenance of all active project fences (106.54 miles), watergaps (78), spring developments (33) were checked and repairs performed; (3) Planted 1000 willow/red osier on Fox Creek/Henslee property; (4) Planted 2000 willows/red osier on Middle Fork John Day River/Coleman property; (5) Planted 1000 willow/red osier cuttings on Fox Creek/Johns property; (6) Since the initiation of the Fish Habitat Project in 1984 we have 126.86 miles of stream protected using 211.72 miles of fence protecting 5658 acres. The purpose of the John Day Fish Habitat Enhancement Program is to enhance production of indigenous wild stocks of spring Chinook and summer steelhead within the sub basin through habitat protection, enhancement and fish passage improvement. The John Day River system supports the largest remaining wild runs of spring chinook salmon and summer steelhead in Northeast Oregon.

Since 1988, wild salmon have been PIT-tagged under programs conducted by the National Marine Fisheries Service, Idaho Department of Fish and Game, Oregon Department of Fish and Game and the U.S. Fish and Wildlife Service. The detection of tagged individuals at Lower Granite Dam provides a measure, of the temporal and spatial distribution of the wild populations. PIT Forecaster was developed to take advantage of this historical data to predict the proportion of a particular population which had arrived at the index site in real-time and to forecast elapsed time to some future percentile in a migration. This report evaluates the performance of the Least Squares (LS) method and the Synchronized historical pattern matching (SYNC) method used in the PIT Forecaster and two other possible methods of prediction reminiscent of methods recommended by the Fish Passage Center (FPC). Alternative No. 1 bases predictions on the historical proportion of PIT-Tags recovered in a specific year and Alternative No. 2 uses the historical cumulative distribution of smolt predicted of a previous season. Over the entire 1994 season, the LS method had the best prediction performance for both aggregate and individual streams. However, for the first half of the season, Alternative No. 1 was clearly a better predictor. This performance deteriorated for the last half of the season, and the LS method improved prediction for aggregate streams and for the individual streams. The algorithms used by PIT Forecaster provide a better prediction as the season progresses. For the first half of the season, Alternative No. 1 did very well for both index years selected. For the 1995 season, Alternative No. 1 will be combined with the LS method to create an improved predictor.

The purpose of this study was to evaluate dam passage survival of subyearling Chinook salmon (Oncorhynchus tshawytscha; CH0) at John Day Dam (JDA) during summer 2010. This study was conducted by researchers from the Pacific Northwest National Laboratory (PNNL) in collaboration with the Pacific States Marine Fisheries Commission (PSMFC) and the University of Washington (UW). The study was designed to estimate the effects of 30% and 40% spill treatment levels on single release survival rates of CH0 passing through two reaches: (1) the dam, and 40 km of tailwater, (2) the forebay, dam, and 40 km of tailwater. The study also estimated additional passage performance measures which are stipulated in the Columbia Basin Fish Accords.