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Scooter Morris (http://www.cgl.ucsf.edu/home/scooter/) talks about the opportunities and challenges in mapping biological networks and gives an brief overview of Cytoscape (http://www.cytoscape.org/), an open source bioinformatics software platform for visualizing molecular interaction...

Scientific topics: Pathway or network

Keywords: Cells and Organisms, Pathway

Resource type: Video

Biological Networkshttps://bivi.co/presentation/biological-networkshttps://tess.elixir-europe.org/materials/biological-networksScooter Morris (http://www.cgl.ucsf.edu/home/scooter/) talks about the opportunities and challenges in mapping biological networks and gives an brief overview of Cytoscape (http://www.cytoscape.org/), an open source bioinformatics software platform for visualizing molecular interaction networks.(PLEASE NOTE: There is a small formatting problem with the presentation slides for the first 2 min of the talk only). This video was filmed and distributed with permission under a Creative Commons license.
Created at: VIZBI 2013.Dr. Scooter MorrisPathway or networkCells and Organisms, Pathway2017-01-31

The increasing scale and complexity of genome scale studies has led to more widespread use of unsupervised analysis pipelines and reduced inspection and sanity checking of the underlying data. Here we will illustrate how the use of interactive visualisation tools along with an explorative...

Keywords: Genome

Resource type: Video

SeqMonk: Using visualisation to identify errors and biases in genome scale sequencing datahttps://bivi.co/presentation/seqmonk-using-visualisation-identify-errors-and-biases-genome-scale-sequencing-datahttps://tess.elixir-europe.org/materials/seqmonk-using-visualisation-to-identify-errors-and-biases-in-genome-scale-sequencing-dataThe increasing scale and complexity of genome scale studies has led to more widespread use of unsupervised analysis pipelines and reduced inspection and sanity checking of the underlying data. Here we will illustrate how the use of interactive visualisation tools along with an explorative approach to analysis can identify problems which would otherwise go undetected by standard pipelines.
Created at: 3rd BiVi Annual Meeting (2017).Dr. Simon AndrewsGenome2017-05-15