Whatever happens in the movie, I doubt the comics will go through all that trouble of changing them. I can't imagine any the editors or writers will be willing to sort out that much continuity (it affects Crystal and Luna too). Not all at once, anyway.

They somehow managed to turn Nick Fury black AND introduce Coulson in the 616 universe, QS and SW's origins shouldnt be that hard.

Just off the top of my head, shortly after they were born Mags found out they didnt carry the x-gene so he exposed them to the Mists and just lied to them.

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