Changlong,
Lastz (and many other tools) allow you to select a reference from your history
instead of picking one of Galaxy's built-in references. To do this, upload
your reference and then when you run Lastz select "in your history" for the
reference location, and pick your uploaded file as the reference dataset.

-Dannon
On Dec 9, 2011, at 4:44 AM, changlong wen wrote:
> Hi,
>
> In the NGS mapping option with "lastz" I cannot find the Cucumber genome.
> Could you please make this reference genome available?
> Or we have the reference sequence. How to add them in in the local server?
> Many thanks.
>
> Have a good day.
>
> Best regards
> changlong
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___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/