The water legislation, which authorizes dozens of infrastructure projects around the country, includes $170 million in authorizing language for the Flint drinking water crisis — with the goal of appropriating the money in a continuing resolution (CR).

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The House-passed version of the water bill authorized $170 million for Flint, while a Senate version appropriated $220 million for communities all around the country facing a drinking water emergency.

“The [measure] invests in America by addressing critical port, waterway, flood protection, and other water resources infrastructure across the country,” said Republican leaders on the House Transportation and Infrastructure, Senate Environment and Public Works, House Natural Resources and House Energy and Commerce committees.

Rep. Dan Kildee (D-Mich.), who has been leading Flint efforts in the House, said he hopes leadership follows through with their commitment to help Flint.

“After weeks of good faith negotiations, I am concerned about last-minute changes by the Republican majority to the Water Resources Development Act [WRDA],” Kildee said in a statement. “Democrats and Republicans have already made a commitment to help the people of Flint by passing legislation in both the House and Senate. Lawmakers now must finish those promises and work to deliver real aid to families before the end of the year.”

House Majority Leader Kevin McCarthy and other California Republicans have long been pushing to divert more water to the drought-stricken areas in central and southern California.

McCarthy said the drought language inserted into the water bill “will bring more water to our communities and supports critical storage projects,” while also providing resources for Democratic drought priorities like conservation, efficiency and recycling efforts.

“This is an important moment for California, and the timing of this deal is critical — we cannot afford to miss capturing water from storms during this wet season,” McCarthy said in a statement, adding that the deal “signals that there is a path to getting more done to restore California’s greatness.”

But critics like Boxer worry the proposed move would harm the fishery industry, roll back the Endangered Species Act and change the way Congress approves new dams.

She said during a press conference that House Republicans “ruined a beautiful bill” because McCarthy “wanted to flex his muscles.”

“I called you here today to express my strong opposition to an outrageous poison pill,” Boxer said Monday. “This is a devastating maneuver. This last-minute backroom deal is so wrong, it is shocking.”

“This bill isn’t perfect but I do believe it will help California and it has bipartisan support including Republicans and Democrats in the House, and that’s why I’m supporting it,” she said in a statement.

Even if the water bill doesn’t pass, however, Congress may still be able to appropriate funding for Flint.

“I remain focused on holding Republicans to their commitment to complete a Flint aid package before Congress adjourns — even if that means using the end of year spending bill as a vehicle,” Sen. Gary Peters (D-Mich.) said in a statement.

Peters told reporters that he is also concerned about the drought provision, but would still support WRDA if the Flint component is included.

Also tucked into WRDA is an authorization for permit programs for the control of coal combustion residuals, as well as language providing infrastructure assistance for Indian country and certainty for several water rights settlements.

Democrats were not successful in an attempt to include a so-called “Buy America” provision in the final bill after GOP leadership worked to strip the language from the measure. Democrats wanted to permanently require that American iron and steel products be used in certain drinking water projects.

The final language that was included in WRDA is the same one-year extension already included in annual appropriations bills, which supporters of the provision say is a disingenuous way to address the issue.

—Timothy Cama contributed to this report, which was updated at 6:30 p.m.