Posts by jbarker2

... I need help figuring out the best way to do the following experiment. I did some previous work which separated the samples into 4 groups based on data other than RNASeq. I then used EBSeq to look for differentially expressed genes in those groups, and I found 6 genes. Now I have a fresh set of sa ...

... Hello,
I am using the EBSeq to look at differential expression in RNA seq data. I have 99 samples and 20531 genes and four conditions. I made my ran the code largely following the example in the "Gene level DE analysis (more than two conditions)" from the EBSeq vignette pdf. Specifically, for m ...