Monday, 30 November 2015

A sea squirt (Ciona intestinalis) - a member of Tunicata Wikimedia Commons uploaded by perezoso (GFDL)

Genomics has clarified our position in the tree of life. To explain this I need to define some taxonomic terms.Phylum Chordata comprises three subphyla: Vertebrata (Craniata), Tunicata (Urochordata)and Cephalochordata. Tunicates include sea squirts such as Ciona (pictured) above. A familiar cephalochordate is the lancelet Branchiostoma lanceolatum better known as Amphioxus (shown below).

Amphioxus has long been used to exemplify the general plan of chordate organization and lancelets used to be regarded as the closest relatives to vertebrates. The genomic evidence, however, has tunicates like the sea squirts as sister group to vertebrates with cephalochordates as a deeper branch. Additional support is given by conserved molecular signatures (here).Chordates belong in the Superphylum Deuterostomia (brilliantly reviewed by Lowe et al. here) along with Phylum Hemichordata and Phylum Echinodermata. Echinoderms are richly represented in the fossil record and the five extant classes include sea urchins, sea cucumbers and starfish. Hemichordates include the acorn worms for which two genomes just became available (here and here).

One of many findings was a cluster of six genes that are conserved across chordates and implicated in patterning of gill slits. This is significant because gill slits were an innovation in the deuterostome lineage (although secondarily lost in echinoderms).Relationships between deuterostome phyla were largely worked out through their embryology, an example being the erection of Chordata by Haeckel. Understanding the genes involved in developmental processes remains a focus in working out our evolutionary history (see the review by Lowe et al. mentioned above).

Wednesday, 25 November 2015

Even before implantation, three cell lineages are apparent in the blastocyst of mouse and human. Outermost is the trophectoderm that will contribute trophoblast to the placenta. The inner cell mass has already differentiated into the epiblast and the primitive endoderm or hypoblast. For mouse, this much has been clear since the pioneering studies of Emil Selenka (here).Gene expression in these three lineages of mouse placenta has been known for some time. What does this tell us about human preimplantation development? A recent paper in Development (here) suggests less than some might like to think.

For trophectoderm, key lineages expressed in the mouse (e.g. Id2, Elf5, Eomes) either are not expressed in human trophectoderm or are expressed in alternative lineages.

There are several genes that are exclusively expressed in human epiblast (e.g.the transcription factor KLF17).

Expression of some genes in primitive endoderm is conserved between mouse and human (e.g. Foxa2/FOXA2).

These findings support other work indicating that the genes and signalling pathways involved in lineage specification differ between mouse and human blastocysts.

Friday, 13 November 2015

Great to see yolk sacs on the front cover of Placenta. Too often the mouse yolk sac is discarded or ignored in the laboratory - either through ignorance or because it has no obvious equivalent in human pregnancy. This particular study showed how mouse deficient in the OGA gene have defective blood vessel formation (vasculogenesis). This affected branching of the blood vessels in the yolk sac.Ignorance of the yolk sac is evidenced by a high impact journal publishing a schematic where mouse yolk sac is shown to be only residual as occurs in humans (here).I believe the mouse model of placentation is incomplete unless the yolk sac is studied along with the chorioallantoic placenta (argued here).

A recent paper discussed the domestic ferret as a model for perinatal brain injury. As the ferret is an altricial species, events that occur during human pregnancy are deferred to the postnatal period. However, neurogenesis and neuronal migration start in pregnancy and the effects of hypoxia on these processes could be explored.

Electron micrograph of the interhemal region in a ferret placenta.Courtest of Dr. Allen C. Enders

Like all carnivores (except hyenas), ferrets have an endotheliochorial placenta. The endothelium of the maternal capillaries is swollen as readily seen by comparing with the endothelium of fetal capillaries above.

The interhemal region of the ferret placenta.Courtesy of Dr. Allen C. Enders

At low power it can be seen that the fetal capillaries indent the surrounding trophoblast so the diffusion distance from maternal to fetal blood is minimized. Thus oxygen should diffuse across this barrier almost as readily as in the human hemochorial placenta.

Hematoidin crystals in the hemophagous region of the ferret placenta.From Strahl and Ballmann 1915

Like other carnivores, the ferret has a prominent hemophagous region (shown in the top figure). Here trophoblast takes up maternal red blood cells by phagocytosis and processes the contained hemoglobin to extract the iron. The hemoglobin breakdown product is hematoidin, which crystallizes out. We have described the same thing in tenrec placenta (here).The most thorough study of ferret placenta was published a century ago (full reference here). The ultrastructure was later described by Lawn and Chiquoine (here). There are recent reviews of endotheliochorial placentation (here) and placentation in carnivores (here).

Tuesday, 3 November 2015

A recent paper on a fossil ape (here) highlights the divergence of the lesser apes (gibbons and siamangs) from the great apes (orangutans, gorilla, chimpanzee, bonobo, human). The fossil (Pliobates cataloniae) has a combination of primitive and derived features that make it difficult to place on the evolutionary tree (discussed here).

Gibbons themselves have placentation with some monkey-like features and others shared with the great apes.

Uterus of an agile gibbon (H. agilis) opened to show the deciduacapsularis enclosing the embryo. From Selenka 1899

The most important shared characteristic is that the fetus develops beneath a decidua capsularis (see previous post) implying that implantation is interstitial as in great apes. In Old World monkeys implantation is superficial and no decidua capsularis is found.

However, when we examined the placenta of a Javan gibbon we found a continuous trophoblastic shell and a sharp boundary between the shell and the underlying endometrium - just as in Òld World monkeys. In great apes, the boundary is less distinct because trophoblast cells invade the endometrium by this route.