# curatedTCGAData
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## CHANGES IN VERSION 1.6.0
### New features
* Methylation data represented as a `DelayedMatrix` with associated HDF5 files
within a `SummarizedExperiment` object. They can be downloaded using the
`Methyl*` assay keyword.
* Big changes to documentation with table added for detailing `ExperimentList`
data types (thanks to @lgeistlinger)
* Vignette now includes some helper functions provided by `TCGAutils`
### Bug fixes and minor improvements
* `TCGAutils` is available for use with `curatedTCGAData`
* 'GISTIC_Peak' datasets are force downloaded due to caching mechanism issues
* Issue of missing 'GISTIC' data for `LAML` and `SKCM` due to incorrect file
links has been resolved (#29 @pcheng84)
* Updated data documentation
## CHANGES IN VERSION 1.4.0
### New features
* `dry.run` argument in `curatedTCGAData` returns a list of metadata file
matches
### Bug fixes and minor improvements
* Main function now uses the `MultiAssayExperiment` constructor function
## CHANGES IN VERSION 1.2.0
### New features
* Released to Bioconductor
* Supports multiple cancers with auto-merge of `colData`
* Added full list of data types
### Bug fixes and minor improvements
* Code clean up (helper functions)
* Use metadata in main function to return list of datasets
## CHANGES IN VERSION 0.99.38
### New features
* Updated `curatedTCGAData` function
* Supports multiple cancers
* Includes curated `colData` datasets
* Updated vignette, documentation from new builds
* Updated metadata from pipeline
### Bug fixes and minor improvements
* Updated NAMESPACE and DESCRIPTION
* Included test for number of resources in EH and in metadata
* Improved input handling of main function
## CHANGES IN VERSION 0.2.0
### Bug fixes and minor improvements
* Updated `DESCRIPTION` file to reflect authorship.
* Progress towards submission to ExperimentHub
## CHANGES IN VERSION 0.1.0
* Added a `NEWS` file to track changes to the package.