A former rising star at the CIA accused of drugging, raping and taping Muslim women while stationed in the Middle East appeared before a federal judge in Virginia today after skipping a pre-trial hearing more than a week ago and going on what sources called an apparent drug binge. Andrew Warren was arrested after an intensive search by federal officials concerned he might be a danger to himself.

A U.S. government employee in Algeria allegedly drugged victims.

According to two federal law enforcement sources, drug paraphernalia and a handgun were found in the Virginia motel room where Warren, former CIA chief of station in Algeria, was arrested. Warren sat in a wheelchair during his Monday afternoon court appearance.

A person close to Warren told ABC News that State Department officials began searching for Warren 11 days ago after he missed a routine pre-trial appearance and could not be found. “His phones were shut off, and none of his family or friends had heard from him,” the person told ABC News.

Warren, 42, was located after federal law enforcement officers reached out to his friends and family, warning them that they were concerned for Warren’s safety and believed he was armed and consuming crack cocaine. He was arrested by local police, U.S. Marshals and the State Department’s Diplomatic Security Service at a Norfolk, Virginia Ramada Limited hotel late Monday. He was taken by law enforcement officials to a local hospital.

The former station chief’s fall from grace has been dramatic. According to two former CIA officials, Warren was a rising star at the CIA. He was a fluent Arabic speaker who had converted to Islam, making him an ideal officer in the Middle East for the intelligence agency. Officially, however, CIA has refused to acknowledge Warren was their spy.

Before being posted to Algeria, Warren had served in Egypt, Afghanistan, and a stint in that CIA domestic station in New York. It was in New York, a few years after 9/11, that supervisors spotted him as a potential star, ready to be deployed around the world as a spy. Within a very short time – four years – Warren had been posted as station chief in Algeria.

Warren worked for the agency in the Middle East until October 2008, until he was recalled from the region and then fired after two women came forward and accused him of rape, accusations which were first reported by ABC News’ Brian Ross in January 2009. He was charged with one federal count of sexual abuse in June.