This message is a reply to message 1 below.
Hi Dennis,
You might want to try UCLA-DOE Fold Server, PSIPred or Bioinbgu's server.
Good luck,
Hewei
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From: bio_bulletin_board-request at bioinformatics.org
[mailto:bio_bulletin_board-request at bioinformatics.org]
Sent: Friday, January 03, 2003 12:01 PM
To: bio_bulletin_board at bioinformatics.org
Subject: BiO_Bulletin_Board digest, Vol 1 #387 - 3 msgs
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Today's Topics:
1. Protein fold prediction (Dennis Livesay)
2. Re: Distance Education Program in Bioinformatics (ravi mayreddy)
3. Re: Distance Education Program in Bioinformatics (Pooja Jain)
--__--__--
Message: 1
Date: Thu, 2 Jan 2003 12:05:00 -0800
From: Dennis Livesay <drlivesay at csupomona.edu>
To: bio bulletin <bio_bulletin_board at bioinformatics.org>
Subject: [BiO BB] Protein fold prediction
Reply-To: bio_bulletin_board at bioinformatics.org
Hello all,
I'm trying to determine the best (threading) software for a large scale,
multiple proteome fold prediction study. We have two competing factors that
I
have to consider... (1) We're especially interested in sequences with
little
homology to others, but (2) due to the size of our dataset, we need software
that is robust and requires little human involvement.
>From a cursory assesment of the available software, it appears that PROSPECT
meets the first requirement, but doesn't do as well with the second. On the
other hand, 3D-PSSM or 123D seem to be the opposite. Any advice???
Thanks in advance,
Dennis
--------------------------------------------------------------------
Dr. Dennis Livesay
Department of Chemistry
Cal Poly, Pomona
phone: 909-869-4409
email: drlivesay at csupomona.eduhttp://www.csupomona.edu/~drlivesay/
--__--__--
Message: 2
Date: Thu, 2 Jan 2003 12:55:44 -0800 (PST)
From: ravi mayreddy <ravi_mayreddy at yahoo.com>
Subject: Re: [BiO BB] Distance Education Program in Bioinformatics
To: bio_bulletin_board at bioinformatics.org
Reply-To: bio_bulletin_board at bioinformatics.org
--0-474254075-1041540944=:58620
Content-Type: text/plain; charset=us-ascii
Pls send details, location etc. by mail.
-Ravi
Mukesh Sharma <agabindia at hotmail.com> wrote:
Admission Notice-
Academy of Genomics & Applied Biology
The new emerging field Bioinformatics is an integration of mathematical,
statistical and computer methods to analyze biological, biochemical and
biophysical data. Than Bioinformatics required a best knowledge not only in
biology but in mathematics too. At that time many private institution in
india providing bioinformatics education but offered courses are totaly
dedicated to biological stream students, so this is necessary to know to
actual requirments of bioinformatics field.
AGAB understand all the requirment of the real bioinformatics world and
designed two bioinformatics course based on the international standards and
market requirments. Course offered by AGAB have the best mixture of biology
& mathamatics to get best growth in the market.
AGAB is trying to get best industrial interaction to provide best
bioinformatics potential in India as well as in international market too.
\"Academy of Genomics & Applied Biology\" is the non-profit making institute
conducting the distance learning program in Bioinformatics for promoting
high-end quality education in the field of Bioinformatics through its two
program:
1) Advance Diploma in Bioinformatics (Hons.)
Duration : 18 months
Fee : 4500/- (4000/- for SC/ST/Govt./Defence prof)
For Foreign Students: US$ 350
Elig. : Graduation in Science Stream with min 50% marks
2) Diploma in Bioinformatics
Duration : 12 months
Fee : 3500/- (3000/- for SC/ST/Govt./Defence prof)
For Foreign Students: US$ 250
Elig. : 10+2 in Science Stream with min 50% marks
The aim of these programs is to provide bioinformatics professionals for
difference pharmacuticals/IT sectors/R&D Dept./Govt. & Non Govt.
Organisations.
Course commencing from 31st of Jan. 2003
How to apply
Application form and Brochure:
The online application form-course details can be obtain through the e-mail.
(For hardcopy send e-mail with your postal address)
Soon we are going to provide online registration facility through our
website.
For more information & any query write us:
agabindia at hotmail.com
Thanx,
Vineet Massey
Manager-Academics
_________________________________________________________________
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--0-474254075-1041540944=:58620
Content-Type: text/html; charset=us-ascii
<P>Pls send details, location etc. by mail.
<P>
<P>-Ravi
<P> <B><I>Mukesh Sharma <agabindia at hotmail.com></I></B> wrote:
<BLOCKQUOTE style="BORDER-LEFT: #1010ff 2px solid; MARGIN-LEFT: 5px;
PADDING-LEFT: 5px"><BR>Admission Notice-<BR>Academy of Genomics &
Applied Biology<BR><BR>The new emerging field Bioinformatics is an
integration of mathematical, <BR>statistical and computer methods to analyze
biological, biochemical and <BR>biophysical data. Than Bioinformatics
required a best knowledge not only in <BR>biology but in mathematics too. At
that time many private institution in <BR>india providing bioinformatics
education but offered courses are totaly <BR>dedicated to biological stream
students, so this is necessary to know to <BR>actual requirments of
bioinformatics field.<BR><BR>AGAB understand all the requirment of the real
bioinformatics world and <BR>designed two bioinformatics course based on the
international standards and <BR>market requirments. Course offered by AGAB
have the best mixture of biology <BR>& mathamatics to get best growth in
the market.<BR><BR>AGAB is trying to g
et best industrial interaction to provide best <BR>bioinformatics potential
in India as well as in international market too.<BR><BR>\"Academy of
Genomics & Applied Biology\" is the non-profit making institute
<BR>conducting the distance learning program in Bioinformatics for promoting
<BR>high-end quality education in the field of Bioinformatics through its
two <BR>program:<BR><BR>1) Advance Diploma in Bioinformatics
(Hons.)<BR>Duration : 18 months<BR>Fee : 4500/- (4000/- for
SC/ST/Govt./Defence prof)<BR>For Foreign Students: US$ 350<BR>Elig. :
Graduation in Science Stream with min 50% marks<BR><BR>2) Diploma in
Bioinformatics<BR>Duration : 12 months<BR>Fee : 3500/- (3000/- for
SC/ST/Govt./Defence prof)<BR>For Foreign Students: US$ 250<BR>Elig. : 10+2
in Science Stream with min 50% marks<BR><BR>The aim of these programs is to
provide bioinformatics professionals for <BR>difference pharmacuticals/IT
sectors/R&D Dept./Govt. & Non Govt. <BR>Organisations.<BR><BR>Cou
rse commencing from 31st of Jan. 2003<BR><BR>How to apply<BR>Application
form and Brochure:<BR>The online application form-course details can be
obtain through the e-mail. <BR>(For hardcopy send e-mail with your postal
address)<BR>Soon we are going to provide online registration facility
through our <BR>website.<BR><BR>For more information & any query write
us:<BR>agabindia at hotmail.com<BR><BR>Thanx,<BR>Vineet
Massey<BR>Manager-Academics<BR><BR><BR><BR><BR><BR><BR><BR><BR><BR>_________
________________________________________________________<BR>MSN 8: advanced
junk mail protection and 3 months FREE*.
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ancedjmf_3mf<BR><BR>_______________________________________________<BR>BiO_B
ulletin_Board maillist -
BiO_Bulletin_Board at bioinformatics.org<BR>https://bioinformatics.org/mailman/
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--__--__--
Message: 3
From: "Pooja Jain" <pooja_jain25 at hotmail.com>
To: bio_bulletin_board at bioinformatics.org
Subject: Re: [BiO BB] Distance Education Program in Bioinformatics
Date: Fri, 03 Jan 2003 11:17:23 +0530
Reply-To: bio_bulletin_board at bioinformatics.org
Hi,
As this is a distance education program, I assume a bunch of books would be
provided to the registered students. Is there any option to arrange some
contact classes to solve the doubts and difficulties that would arise while
reading?
I would also like to know the location of the Institute and how old is this
course?
Thank you
Pooja
>From: ravi mayreddy <ravi_mayreddy at yahoo.com>
>Reply-To: bio_bulletin_board at bioinformatics.org>To: bio_bulletin_board at bioinformatics.org>Subject: Re: [BiO BB] Distance Education Program in Bioinformatics
>Date: Thu, 2 Jan 2003 12:55:44 -0800 (PST)
>>>Pls send details, location etc. by mail.
>>-Ravi
> Mukesh Sharma <agabindia at hotmail.com> wrote:
>Admission Notice-
>Academy of Genomics & Applied Biology
>>The new emerging field Bioinformatics is an integration of mathematical,
>statistical and computer methods to analyze biological, biochemical and
>biophysical data. Than Bioinformatics required a best knowledge not only in
>biology but in mathematics too. At that time many private institution in
>india providing bioinformatics education but offered courses are totaly
>dedicated to biological stream students, so this is necessary to know to
>actual requirments of bioinformatics field.
>>AGAB understand all the requirment of the real bioinformatics world and
>designed two bioinformatics course based on the international standards and
>market requirments. Course offered by AGAB have the best mixture of biology
>& mathamatics to get best growth in the market.
>>AGAB is trying to get best industrial interaction to provide best
>bioinformatics potential in India as well as in international market too.
>>\"Academy of Genomics & Applied Biology\" is the non-profit making
>institute
>conducting the distance learning program in Bioinformatics for promoting
>high-end quality education in the field of Bioinformatics through its two
>program:
>>1) Advance Diploma in Bioinformatics (Hons.)
>Duration : 18 months
>Fee : 4500/- (4000/- for SC/ST/Govt./Defence prof)
>For Foreign Students: US$ 350
>Elig. : Graduation in Science Stream with min 50% marks
>>2) Diploma in Bioinformatics
>Duration : 12 months
>Fee : 3500/- (3000/- for SC/ST/Govt./Defence prof)
>For Foreign Students: US$ 250
>Elig. : 10+2 in Science Stream with min 50% marks
>>The aim of these programs is to provide bioinformatics professionals for
>difference pharmacuticals/IT sectors/R&D Dept./Govt. & Non Govt.
>Organisations.
>>Course commencing from 31st of Jan. 2003
>>How to apply
>Application form and Brochure:
>The online application form-course details can be obtain through the
>e-mail.
>(For hardcopy send e-mail with your postal address)
>Soon we are going to provide online registration facility through our
>website.
>>For more information & any query write us:
>agabindia at hotmail.com>>Thanx,
>Vineet Massey
>Manager-Academics
>>>>>>>>>>_________________________________________________________________
>MSN 8: advanced junk mail protection and 3 months FREE*.
>http://join.msn.com/?page=features/junkmail&xAPID=42&PS=47575&PI=7324&DI=7474&SU=
>http://www.hotmail.msn.com/cgi-bin/getmsg&HL=1216hotmailtaglines_advancedjmf_3mf
>>_______________________________________________
>BiO_Bulletin_Board maillist - BiO_Bulletin_Board at bioinformatics.org>https://bioinformatics.org/mailman/listinfo/bio_bulletin_board>>>---------------------------------
>Do you Yahoo!?
>Yahoo! Mail Plus - Powerful. Affordable. Sign up now
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