Abstract

The genotyping report from the Illumina CLIA WGS pipeline using the HumanOmni2.5-8v1 BeadChip
Genotyping was performed as part of the Illumina CLIA WGS pipeline using the HumanOmni2.5-8v1 BeadChip. The genotyping report is included as a tab-delimited text file and includes a header followed by a number of columns that describe the data within, including: the SNP name, GC score, Allele A – Forward, Allele B – Forward, Allele A – Design and Allele B – Design. The allele calls for the genotyping array are listed in forward orientation.