I finally figured out how to encode videos to make them less fuzzier looking on ニコニコ動画.After much research through numerous Japanese and English websites, I figured out that videos have to be made in a certain resolution before uploading to the website. No wonder all my uploads were in bad quality. owo

Had to download different Video converters as well. I was testing out which ones convert better. Finally found one that actually encoded into flv well enough. =A=;;

You can see the result down there in the English version of Bokumote that I uploaded.