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Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:query proteins and first shell of interactors

white nodes:second shell of interactors

Node Content

empty nodes:proteins of unknown 3D structure

filled nodes:some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Dehly_0228

NADH dehydrogenase (622 aa)

Predicted Functional Partners:

Dehly_0229

NADH dehydrogenase 24 kDa subunit (166 aa)

0.999

Dehly_0623

Ferredoxin (243 aa)

0.999

nuoD

NADH dehydrogenase I subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (367 aa)

0.999

Dehly_0625

NADH dehydrogenase 24 kDa subunit (156 aa)

0.999

nuoB

NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (203 aa)

0.999

nuoH

NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone (351 aa)

0.999

nuoA

NADH-ubiquinone/plastoquinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (124 aa)

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1

node2

node1 accession

node2 accession

node1 annotation

node2 annotation

score

Dehly_0228

Dehly_0229

Dehly_0228

Dehly_0229

NADH dehydrogenase

NADH dehydrogenase 24 kDa subunit

0.999

Dehly_0228

Dehly_0623

Dehly_0228

Dehly_0623

NADH dehydrogenase

Ferredoxin

0.999

Dehly_0228

Dehly_0625

Dehly_0228

Dehly_0625

NADH dehydrogenase

NADH dehydrogenase 24 kDa subunit

0.999

Dehly_0228

Dehly_0836

Dehly_0228

Dehly_0836

NADH dehydrogenase

4Fe-4S ferredoxin

0.999

Dehly_0228

Dehly_0839

Dehly_0228

Dehly_0839

NADH dehydrogenase

Proton-translocating NADH-quinone oxidoreductase subunit L

0.999

Dehly_0228

Dehly_0840

Dehly_0228

Dehly_0840

NADH dehydrogenase

Proton-translocating NADH-quinone oxidoreductase subunit M

0.999

Dehly_0228

nuoA

Dehly_0228

Dehly_0831

NADH dehydrogenase

NADH-ubiquinone/plastoquinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient

0.999

Dehly_0228

nuoB

Dehly_0228

Dehly_0832

NADH dehydrogenase

NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient

0.999

Dehly_0228

nuoD

Dehly_0228

Dehly_0834

NADH dehydrogenase

NADH dehydrogenase I subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient

0.999

Dehly_0228

nuoH

Dehly_0228

Dehly_0835

NADH dehydrogenase

NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone

0.999

Dehly_0229

Dehly_0228

Dehly_0229

Dehly_0228

NADH dehydrogenase 24 kDa subunit

NADH dehydrogenase

0.999

Dehly_0229

Dehly_0623

Dehly_0229

Dehly_0623

NADH dehydrogenase 24 kDa subunit

Ferredoxin

0.999

Dehly_0229

Dehly_0625

Dehly_0229

Dehly_0625

NADH dehydrogenase 24 kDa subunit

NADH dehydrogenase 24 kDa subunit

0.827

Dehly_0229

Dehly_0836

Dehly_0229

Dehly_0836

NADH dehydrogenase 24 kDa subunit

4Fe-4S ferredoxin

0.999

Dehly_0229

Dehly_0839

Dehly_0229

Dehly_0839

NADH dehydrogenase 24 kDa subunit

Proton-translocating NADH-quinone oxidoreductase subunit L

0.999

Dehly_0229

Dehly_0840

Dehly_0229

Dehly_0840

NADH dehydrogenase 24 kDa subunit

Proton-translocating NADH-quinone oxidoreductase subunit M

0.999

Dehly_0229

nuoA

Dehly_0229

Dehly_0831

NADH dehydrogenase 24 kDa subunit

NADH-ubiquinone/plastoquinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient

0.999

Dehly_0229

nuoB

Dehly_0229

Dehly_0832

NADH dehydrogenase 24 kDa subunit

NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient

0.999

Dehly_0229

nuoD

Dehly_0229

Dehly_0834

NADH dehydrogenase 24 kDa subunit

NADH dehydrogenase I subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient

0.999

Dehly_0229

nuoH

Dehly_0229

Dehly_0835

NADH dehydrogenase 24 kDa subunit

NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone

0.999

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Network Stats

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Functional enrichments in your networkNote: some enrichments may be expected here (why?)

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Statistical background

For the above enrichment analysis, the following statistical background is assumed: