Fusion

STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:query proteins and first shell of interactors

white nodes:second shell of interactors

Node Content

empty nodes:proteins of unknown 3D structure

filled nodes:some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Phatrdraft1384

SURF1-like protein; Probably involved in the biogenesis of the COX complex (343 aa)

Predicted Functional Partners:

Phatr21354

Predicted protein (422 aa)

0.977

Phatr32550

Predicted protein (393 aa)

0.955

Phatr16147

Predicted protein (200 aa)

0.949

Phatr14770

Predicted protein (171 aa)

0.941

Phatr26515

Predicted protein (272 aa)

0.906

Phatr11016

Predicted protein (91 aa)

0.885

Phatr15417

Predicted protein (83 aa)

0.857

Phatr20948

Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (104 aa)

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1

node2

node1 annotation

node2 annotation

score

Phatr11016

Phatr14770

Predicted protein

Predicted protein

0.812

Phatr11016

Phatr15417

Predicted protein

Predicted protein

0.853

Phatr11016

Phatr16147

Predicted protein

Predicted protein

0.959

Phatr11016

Phatr20787

Predicted protein

Predicted protein; Belongs to the peptidase M16 family

0.835

Phatr11016

Phatr20948

Predicted protein

Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain

0.971

Phatr11016

Phatr21354

Predicted protein

Predicted protein

0.969

Phatr11016

Phatr26515

Predicted protein

Predicted protein

0.938

Phatr11016

Phatr32550

Predicted protein

Predicted protein

0.811

Phatr11016

Phatrdraft1384

Predicted protein

SURF1-like protein; Probably involved in the biogenesis of the COX complex

0.885

Phatr14770

Phatr11016

Predicted protein

Predicted protein

0.812

Phatr14770

Phatr15417

Predicted protein

Predicted protein

0.898

Phatr14770

Phatr16147

Predicted protein

Predicted protein

0.958

Phatr14770

Phatr20948

Predicted protein

Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain

0.815

Phatr14770

Phatr21354

Predicted protein

Predicted protein

0.953

Phatr14770

Phatr32550

Predicted protein

Predicted protein

0.931

Phatr14770

Phatr50559

Predicted protein

Predicted protein

0.431

Phatr14770

Phatrdraft1384

Predicted protein

SURF1-like protein; Probably involved in the biogenesis of the COX complex

0.941

Phatr15417

Phatr11016

Predicted protein

Predicted protein

0.853

Phatr15417

Phatr14770

Predicted protein

Predicted protein

0.898

Phatr15417

Phatr16147

Predicted protein

Predicted protein

0.924

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Network Stats

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Functional enrichments in your networkNote: some enrichments may be expected here (why?)

Enrichment analysis is still ongoing, please wait ...

Statistical background

For the above enrichment analysis, the following statistical background is assumed: