Installation

Prerequisites

Java SE runtime (JRE) 7 or later - remember to select the 64-bit version if your OS is 64-bit! Verify your Java version here. (Optional) Install R. R is required for certain modules (e.g. baseline correction and heat maps). (Optional) Install the required R packages using the following commands in the R console:

Adjust to define the total amount of memory available to MZmine
Location where temporary files will be stored
Adjust if you wish to run a specific Java Virtual Machine (Usually not necessary to modify)