The Iraqi Counter Terrorism Bureau directs the Iraqi Counter Terrorism Command, which is a further military force answerable to the Prime Minister of Iraq directly. As of 30 June 2009, there had been legislation in progress for a year to make the Iraqi CTB a separate ministry.[3]

The position of Minister of Defense was left vacant in the current Iraqi cabinet, approved on 21 December 2010. While it is vacant, Prime Minister Khaled al-Obaidi serves as the acting defense minister.

The previous Minister of Defense, Lieutenant General Abd al-Qadr Muhammed Jassim al-Obaidi, is a Sunni career military officer and political independent. He had limited experience and faced a number of hurdles impeding his effective governance. Some of the major problems included inheriting a staff that is notorious for favorism, corruption, and deeply divided along sectarian and ethnic lines. He was a rival of the former Minister of the Interior Jawad al-Bolani, National Security Advisor Muwafaq al-Rubai, and Minister of Staff for National Security Affairs Shirwan al-Waili. He has been criticized for not being able to stand up to the Badr Organization and Mehdi Army members which dominate his own party. In addition, as a Sunni he faced inherent challenges working within a Shiite-dominated government.