Abstract. A new approach is explored for computing estimates of the error covariance associated with the intrinsic errors of a numerical forecast model in regions characterized by upwelling and downwelling. The approach used is based on a combination of strong constraint data assimilation, twin model experiments, linear inverse modeling, and Bayesian hierarchical modeling. The resulting model error covariance estimates Q are applied to a model of the California Current System using weak constraint four-dimensional variational (4D-Var) data assimilation to compute estimates of the ocean circulation. The results of this study show that the estimates of Q derived following our approach lead to demonstrable improvements in the model circulation estimates and isolate regions where model errors are likely to be important and that have been independently identified in the same model in previously published work.

We present a method for estimating intrinsic model error in a model of the California Current System. The estimated model error covariance matrix is used in the weak constraint formulation of the Regional Ocean Modeling System, four-dimensional variational data assimilation system, and comparison of the circulation estimates computed in this way show demonstrable improvement to those computed in the strong constraint formulation, where intrinsic model error is not taken into account.

We present a method for estimating intrinsic model error in a model of the California Current...