Fusion

STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:query proteins and first shell of interactors

white nodes:second shell of interactors

Node Content

empty nodes:proteins of unknown 3D structure

filled nodes:some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Phatr11336

Predicted protein (270 aa)

Predicted Functional Partners:

SKT1

Succinyl-coenzyme A-3-oxo-acid coenzyme a-transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate (511 aa)

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1

node2

node1 accession

node2 accession

node1 annotation

node2 annotation

score

NRPS

Phatr11336

Phatr47104

Phatr11336

Non ribosomal peptide synthase

Predicted protein

0.530

Phatr10378

Phatr11336

Phatr10378

Phatr11336

Predicted protein

Predicted protein

0.651

Phatr10378

Phatr41807

Phatr10378

Phatr41807

Predicted protein

Predicted protein

0.996

Phatr11235

Phatr11336

Phatr11235

Phatr11336

Predicted protein

Predicted protein

0.519

Phatr11235

Phatr13895

Phatr11235

Phatr13895

Predicted protein

Predicted protein

0.518

Phatr11235

Phatr15371

Phatr11235

Phatr15371

Predicted protein

Predicted protein

0.523

Phatr11235

Phatr43556

Phatr11235

Phatr43556

Predicted protein

Predicted protein

0.517

Phatr11235

Phatr48122

Phatr11235

Phatr48122

Predicted protein

Predicted protein

0.506

Phatr11336

NRPS

Phatr11336

Phatr47104

Predicted protein

Non ribosomal peptide synthase

0.530

Phatr11336

Phatr10378

Phatr11336

Phatr10378

Predicted protein

Predicted protein

0.651

Phatr11336

Phatr11235

Phatr11336

Phatr11235

Predicted protein

Predicted protein

0.519

Phatr11336

Phatr13895

Phatr11336

Phatr13895

Predicted protein

Predicted protein

0.516

Phatr11336

Phatr15371

Phatr11336

Phatr15371

Predicted protein

Predicted protein

0.513

Phatr11336

Phatr36165

Phatr11336

Phatr36165

Predicted protein

Predicted protein

0.651

Phatr11336

Phatr41807

Phatr11336

Phatr41807

Predicted protein

Predicted protein

0.651

Phatr11336

Phatr43556

Phatr11336

Phatr43556

Predicted protein

Predicted protein

0.521

Phatr11336

Phatr48122

Phatr11336

Phatr48122

Predicted protein

Predicted protein

0.513

Phatr11336

SKT1

Phatr11336

Phatr23365

Predicted protein

Succinyl-coenzyme A-3-oxo-acid coenzyme a-transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate

0.775

Phatr13895

Phatr11235

Phatr13895

Phatr11235

Predicted protein

Predicted protein

0.518

Phatr13895

Phatr11336

Phatr13895

Phatr11336

Predicted protein

Predicted protein

0.516

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Network Stats

Network Stats analysis is still ongoing, please wait ...

Functional enrichments in your networkNote: some enrichments may be expected here (why?)

Enrichment analysis is still ongoing, please wait ...

Statistical background

For the above enrichment analysis, the following statistical background is assumed: