Category Archives: Geobiology, palaeontology, and evolution

Michael Rampino has produced a new book (Rampino, M.R. 2017. Cataclysms: A New Geology for the Twenty-First Century. Columbia University Press; New York). As the title subtly hints, Rampino is interested in mass extinctions and impacts; indeed quite a lot more, as he lays out a hypothesis that major terrestrial upheavals may stem from gravitational changes during the Solar System’s progress around the Milky Way galaxy. Astronomers reckon that this 250 Ma orbit involves wobbling through the galactic plane and possibly varying distributions of mass – stars, gas, dust and maybe dark matter – in a 33 Ma cycle. Changing gravitational forces affecting the Solar System may possibly fling small objects such as comets and asteroids towards the Earth on a regular basis. In the 1980s and 90s Rampino and others linked mass extinctions, flood-basalt outpourings and cratering events, with a 27 Ma periodicity. So the books isn’t entirely new, though it reads pretty well.

Such ideas have been around for decades, but it all kicked off in 1980 when Luis and Walter Alvarez and co-workers published their findings of iridium anomalies at the K-Pg boundary and suggested that this could only have arisen from a major asteroid impact. Since it coincided with the mass extinction of dinosaurs and much else besides at the end of the Cretaceous it could hardly be ignored. Indeed their chance discovery launched quite a bandwagon. The iridium-rich layer also included glass spherules, shocked mineral grains, soot and other carbon molecules –nano-scale diamonds, nanotubes and fullerenes whose structure is akin to a geodesic dome – and other geochemical anomalies. Because the Chicxulub crater off the Yucatán Peninsula of Mexico is exactly the right age and big enough to warrant a role in the K-Pg extinction, these lines of evidence have been widely adopted as the forensic smoking gun for other impacts. In the last 37 years every extinction event horizon has been scrutinized to seek such an extraterrestrial connection, with some success, except for exactly coincident big craters.

The K-Pg event is the only one that shows a clear temporal connection with a small mountain falling out of the sky, most of the others seeming to link with flood basalt events and their roughly cyclical frequency – but hence Rampino’s Shiva hypothesis that impacts may have caused the launch of mantle plumes from the core-mantle boundary. Others have used the ‘smoking gun’ components to link lesser events to a cosmic cause, the most notorious being the 2007 connection to the extinction of the North American Pleistocene megafauna and the start of the Younger Dryas return of glacial conditions. Since 1980 alternative mechanisms for producing most of the impact-connected materials have been demonstrated. It emerged in 2011 that nano-diamonds and fullerenes may form in a candle flame and their global distribution could be due to forest fires. And now it seems that shocked mineral grains can form during a lightning strike (Chen, J. et al. 2017. Generation of shock lamellae and melting in rocks by lightning-induced shock waves and electrical heating. Geophysical Research Letters, v. 44, p. 8757-8768; doi:10.1002/2017GL073843). Shocked or not, quartz and feldspar grains are resistant enough to be redistributed into sediments. Although platinum-group metals, such as iridium, are likely to be mainly locked away in Earth’s core, some volcanic exhalations and many flood basalts – especially those with high titanium contents – significantly are enriched in them. So even the Alvarez’s evidence for a K-Pg impact has an alternative explanation. Rampino is to be credited for acknowledging that in his book.

An awful lot of ideas about rare yet dreadful events in the biosphere depend, like many criminal cases, on the ‘weight of evidence’ and defy absolute proof. The evidence generally permits alternatives, such the cunning Verneshot hypothesis for the extinction-flood basalt connection supported by one of the founders of plate tectonics, W. Jason Morgan. As regards The K-Pg extinction, it is certain that a very large mass did fall on Chicxulub at the time of the mass extinction, whereas the Deccan flood basalts span a million years or so either side. But the jury is out on whether either or both did the deed. For other events of this scale and larger ones the money is on internal origins. As for Rampino’s galactic hypothesis, the statistics are decidedly dodgy, but chasing down more forensics is definitely on the cards.

To see traces of where our forebears walked, such as the famous Australopithecusafarensistrackway at Laetoli in Tanzania, the footprints of Neanderthal children in 350 ka old Italian volcanic ash (The first volcanologists? Earth Pages March 2003) or even those of Mesolithic families in estuarine mud is about as heart stopping as it gets for a geologist. But imagine the astonishment of members of a multinational team working on Miocene shore-line sediments on Crete when they came upon a bedding surface covered with what are almost certainly the footprints of another bipedal animal from 5.7 Ma ago (Gierliński, G.D. et al. 2017. Possible hominin footprints from the late Miocene (c. 5.7 Ma) of Crete? Proceedings of the Geologists’ Association, online; https://doi.org/10.1016/j.pgeola.2017.07.006). Trackways preserve a few moments in time, however old they are and the chances of their being preserved are very small, yet they can supply information that is lost from even the best preserved fossil, such as gait, weight, speed and so forth.

The tracks clearly indicate that whatever left them was bipedal and lacked claws, and closely resemble those attributed to A. afarensis at Laetoli in a 3.7 Ma old volcanic ash. What they do not resemble closely are those of non-hominin modern primates, such as chimpanzees. They are diminutive compared with adult modern human prints, being about 12.5 cm long (equivalent to a UK child’ shoe size 4 – US size 4.5, EU 20) and about a third to half the size of those at Laetoli. Were they around the age of those at Laetoli or younger there seems little doubt that they would be widely interpreted as being of hominin origin. But being from an island in the Mediterranean as well as far from sites in Africa that have yielded Miocene hominins (Ardipithecus kadabba from Ethiopia, Orrorin from Kenya and Sahelanthropusfrom Chad), such an interpretation is bound to create controversy. Somewhat less controversial might be to regard them as having been created by a late-Miocene primate that convergently evolved a hominin-like upright gait and foot. Being preserved in what seem to be coastal marine sediments, there is probably little chance of body fossils being preserved in the exposed horizon. Since foot bones are so fragile, even if a primate fossil is discovered in the late Miocene of Crete the chances of resolving the issue are pretty remote. Yet fossil primate specialists will undoubtedly beat a well-trodden path to the Trachilos site near Kissamos on Crete

It is now certain that the Cretaceous-Palaeogene boundary 66 Ma ago coincided with the impact of a ~10 km diameter asteroid that produced the infamous Chicxulub crater north of Mexico’s Yucatán peninsula. Whether or not this was the trigger for the mass extinction of marine and terrestrial fauna and flora – the flood basalts of the Deccan Traps are still very much in the frame – the worldwide ejecta layer from Chicxulub coincides exactly with the boundary that separates the Mesozoic and Cenozoic Eras. As well as shocked quartz grains, anomalously high iridium concentrations and glass spherules the boundary layer contains abundant elemental carbon, which has been widely ascribed to soot released by vegetation that went up in flames on a massive scale. Atmospheric oxygen levels in the late Cretaceous were a little lower than those at present, or so recent estimates from carbon isotopes in Mesozoic to Recent ambers suggest (Tappert, R. et al. 2013. Stable carbon isotopes of C3 plant resins and ambers record changes in atmospheric oxygen since the Triassic. Geochimica et Cosmochimica Acta, v.121, p. 240-262,) – other estimates put the level substantially above that in modern air. Whatever, global wildfires occurred within the time taken for the Chicxulub ejecta to settle from the atmosphere; probably a few years. It has been estimated that about 700 billion tonnes of soot were laid down, suggesting that most of the Cretaceous terrestrial biomass and even a high proportion of that in soils literally went up in smoke.

Charles Bardeen and colleagues at the University of Colorado, Boulder, have modelled the climatic and chemical effects of this aspect of the catastrophe (Bardeen, C.G. et al. 2017. On transient climate change at the Cretaceous−Paleogene boundary due to atmospheric soot injections. Proceedings of the National Academy of Sciences; doi:10.1073/pnas.1708980114). Despite the associated release of massive amounts of CO2 and water vapour by both the burning and the impact into seawater, giving increased impetus to the greenhouse effect, the study suggests that fine-grained soot would have lingered as an all enveloping pall in the stratosphere. Sunlight would have been blocked for over a year so that no photosynthesis would have been possible on land or in the upper ocean, the temperatures of the continent and ocean surfaces would have dropped by as much as 28 and 11 °C respectively to cause freezing temperatures at mid-latitudes. Moreover, absorption of solar radiation by the stratospheric soot layer would have increased the temperature of the upper atmosphere by several hundred degrees to destroy the ozone layer. Consequently, once the soot cleared the surface would have had a high ultraviolet irradiation for around a year.

The main implication of the modelling is a collapse in both green terrestrial vegetation and oceanic phytoplankton; most of the food chain would have been absent for long enough to wipe out those animals that depended on it entirely. While an enhanced greenhouse effect and increased acidification of the upper ocean through CO2 emissions by the Deccan flood volcanism would have placed gradually increasing and perhaps episodic stresses on the biosphere, the outcome of the Chicxulub impact would have been immediate and terrible.

The dominant feature of Phanerozoic stratigraphy is surely the way that many of the formally named major time boundaries in the Stratigraphic Column coincide with sudden shifts in the abundance and diversity of fossil organisms. That is hardly surprising since all the globally recognised boundaries between Eras, Periods and lesser divisions in relative time were, and remain, based on palaeontology. Two boundaries between Eras – the Palaeozoic-Mesozoic (Permian-Triassic) at 252 Ma and Mesozoic-Cenozoic (Cretaceous-Palaeogene) at 66 Ma – and a boundary between Periods – Triassic-Jurassic at 201 Ma – coincide with enormous declines in biological diversity. They are defined by mass extinctions involving the loss of up to 95 % of all species living immediately before the events. Two other extinction events that match up to such awesome statistics do not define commensurately important stratigraphic boundaries. The Frasnian Stage of the late-Devonian closed at 372 Ma with a prolonged series of extinctions (~20 Ma) that eliminated at least 70% of all species that were alive before it happened. The last 10 Ma of the Ordovician period witnessed two extinction events that snuffed out about the same number of species. The Cambrian Period is marked by 3 separate events that in percentage terms look even more extreme than those at the end of the Ordovician, but there are a great many less genera known from Cambrian times than formed fossils during the Ordovician.

Faunal extinctions during the Phanerozoic in relation to the Stratigraphic Column.

Empirical coincidences between the precise timing of several mass extinctions with that of large igneous events – mainly flood basalts – suggest a repeated volcanic connection with deterioration of conditions for life. That is the case for four of the Famous Five, the end-Ordovician die-off having been ascribed to other causes; global cooling that resulted in south-polar glaciation of the Gondwana supercontinent and/or an extra-solar gamma-ray burst (predicated on the preferential extinction of Ordovician near-surface, planktonic fauna such as some trilobite families). Neither explanation is entirely satisfactory, but new evidence has emerged that may support a volcanic trigger (Jones, D.S. et al. 2017. A volcanic trigger for the Late Ordovician mass extinction? Mercury data from south China and Laurentia. Geology, v. 45, p. 631-634; doi:10.1130/G38940.1). David Jones and his US-Japan colleagues base their hypothesis on several very strong mercury concentrations in thin sequences in the western US and southern China of late Ordovician marine sediments that precede, but do not exactly coincide with, extinction pulses. They ascribe these to large igneous events that had global effects, on the basis of similar Hg anomalies associated with extinction-related LIPs. Yet no such volcanic provinces have been recorded from that time-range of the Ordovician, although rift-related volcanism of roughly that age has been reported from Korea. That does not rule out the possibility as LIPs, such as the Ontong Java Plateau, are known from parts of the modern ocean floor that formed in the Mesozoic and Cenozoic. Ordovician ocean floor was subducted long ago.

The earlier Hg pulses coincide with evidence for late Ordovician glaciations over what is now Africa and eastern South America. The authors suggest that massive volcanism may then have increased the Earth’s albedo by blasting sulfates into the stratosphere. A similar effect may have resulted from chemical weathering of widely exposed flood basalts which draws down atmospheric CO2. The later pulses coincide with the end of Gondwanan glaciation, which may signify massive emanation of volcanic CO2 into the atmosphere and global warming. Despite being somewhat speculative, in the absence of evidence, a common link between the Big Five plus several other major extinctions and LIP volcanism would quieten their popular association with major asteroid and/or comet impacts currently being reinvigorated by drilling results from the K-Pg Chicxulub crater offshore of Mexico’s Yucatan Peninsula.

That seawater circulates through the axial regions of rifts associated with sea-floor spreading has been known since well before the acceptance of plate tectonics. The idea stems from the discovery in 1949 of brines with a temperature of 60°C on the central floor of the Red Sea, which in the early 60s turned out to be anomalously metal-rich as well. Advanced submersibles that can withstand the high pressures at great depth a decade later produced images of swirling clouds of sediment from large sea-floor springs, first on the Galapagos rift and subsequently on many others. The first shots were of dark, turbulent clouds, prompting the term ‘black smoker’ for such hydrothermal vents and it turns out that others produce light-coloured clouds – ‘white smokers’. Sampling revealed that the sediments in black smokers were in fact fine-grained precipitates of metallic sulfides, whereas those forming white smokers were sulfates, carbonates and oxides of barium calcium and silicon also precipitated from solute-rich brines produced by partial dissolution of ocean floor through which they had passes.

A black smoker with associated organism. (credit: Wikipedia)

Excitement grew when hydrothermal vents were shown to have complex animal ecosystems completely new to science. A variety of chemical evidence, most importantly the common presence of proteins and other cell chemicals built around metal sulfide groups in most living organisms, prompted the idea that hydrothermal vents may have hosted the origins of life on Earth. Many fossil vent systems also contain fossils; macrofossils in the Phanerozoic and microbial ones from the Precambrian. But tangible signs of life, in the form of mats ascribed to bacteria or archaea holding together fine-grained sediments, go back no further than 3830 Ma in the Isua area of SW Greenland. Purely geochemical evidence that carbonaceous compounds may have formed in living systems are ambiguous since quite complex hydrocarbons can be synthesised abiogenically by Fischer-Tropsch reactions between carbon monoxide and hydrogen. Signs of deep sea hydrothermal activity are common in any geological terrain containing basalt lavas with the characteristic pillows indicating extrusion beneath water. So to trace life’s origins all that is needed to trigger the interest of palaeobiologists are the oldest known pillow lavas. Until quite recently, that meant the Isua volcano-sedimentary association, but heating, high pressures and very strong deformation affected those rocks when they were metamorphosed half a billion years after they were formed; a cause for skepticism by some geoscientists.

The primacy of Isua metavolcanic rocks has been challenged by more extensive metamorphosed basalts in the Nuvvuagittuk area in Quebec on the east side of Hudson Bay, Canada. They contain hydrothermal ironstones associated with pillowed basalts that are cut by more silica-rich intrusive igneous rocks dated between 3750 and 3775 Ma. That might place the age of basalt volcanism and the hydrothermal systems in the same ball park as those of Isua, but intriguingly the basalts’ 146Sm-142Nd systematics suggest a possible age of magma separation from the mantle of 4280 Ma (this age is currently disputed as it clashes with U-Pb dates for zircon grains extracted from the metabasalts around the same as the age at Isua). Nonetheless, some parts of the Nuvvuagittuk sequence are barely deformed and show only low-grade metamorphism, and they contain iron- and silicon-rich hot spring deposits (Dodd, M.S. et al. 2017. Evidence for early life in Earth’s oldest hydrothermal vent precipitates. Nature, v. 543, p. 60-64; doi:10.1038/nature21377). As at Isua, the ironstones contain graphite whose carbon isotope proportions have an ambiguous sign of having formed by living or abiotic processes. It is the light deformation and low metamorphism of the rocks that gives them an edge as regards being hosts to tangible signs of life. Extremely delicate rosettes and blades of calcium carbonate and phosphate, likely formed during deposition, remain intact. These signs of stasis are in direct contact with features that are almost identical to minute tubes and filaments formed in modern vents by iron-oxidising bacteria. All that is missing are clear signs of bacterial cells. Ambiguities in the dating of the basalt host rocks do not allow the authors claims that their signs of life are significantly older than those at Isua, but their biotic origins are less open to question. Neither offer definitive proof of life, despite widespread claims by media science correspondents, some of whom tend metaphorically to ‘run amok ‘ when the phrase ‘ancient life’ appears; in this case attempting to link the paper with life on Mars …

Until only a few decades ago artistic portrayals of dinosaurs had them as leathery and scaled like lizards or crocodiles, as indeed rare examples of their fossilized skin seemed to suggest. The animatronic and CGI dinosaurs of the first Jurassic Park film were scary, but brownish grey. Later films in the franchise had them mottled and sometimes in colour, but still as mainly scaled leathery monsters. Reality soon overtook imagination as more and more exquisitely preserved fossils of small species were turned up, mainly in China, that were distinctly furry, fuzzy or feathered as shown below in a Microraptor gui fossil. It is now well-established that birds arose in the Jurassic from saurischian dinosaurs, the order that also included all of the large carnivorous dinosaurs as well as the many more nimble and diminutive ones whose feathers sometimes conferred an ability to glide or fly. Even the other main order, the ornithischia noted for hugeness and herbivory, has yielded fossil skin that suggest furry or feathered pelts. Once fur and feathers had been found, the next big issue became whether or not dinosaurs may have been as gaudy as many modern birds.

Fossil of a feathered dinosaur Microraptor gui from the early Cretaceous Jiufotang Formation in China (source: Wikipedia)

One of the first palaeobiologists to become immersed in the search for colourful dinosaurs was Jakob Vinther, now of Britain’s Bristol University. In The March 2017 issue of Scientific American he summarises the progress that he and his colleagues have made (Vinther, J. 2017. The true colors of dinosaurs. Scientific American, v. 316(3), p. 42-49). On his account, the major breakthrough was Vinther’s discovery of tiny spherules in fossilised octopus ink that were identical to the granules of the pigment melanin that give the famous cephalopod ‘smoke screen’ its brownie-black colour. Melanin, or more precisely the melanosomes in which it is enclosed, is a key to coloration throughout much of the animal kingdom, especially in fur and feathers. There are two basic kinds, one conferring blackness and the other that imparts a rusty red hue, which combined with paleness due to lack of melanin together produce a gamut of greys, reds, browns oranges and yellows. Elongated melanosomes when lined up produce the phenomenon of interference fringes that yield iridescence, responsible for the bright colours of starlings, hummingbirds and some ducks when in bright light. There are other pigments, such as carotenoids (bright reds and yellows) and porphyrins (green, red and blue) that add to the gamut possible in animals, but it was melanosomes that captured Vinther’s attention because of their importance in living feather colours.

Melanosomes occur in distinctively grouped assemblages, according to actual colour, and very similar microscopic structures turned up in the first fossil bird feathers that he studied. Others had assumed that they were bacterial colonies, which had grown during decay. The breakthrough was finding a fossil bird feather in which different structures were arranged in stripes; clear signs of patterning. Vinther’s concept bears fruit in a range of furry and feathered dinosaurs. One (Anchiornis) with a black and white body and limb speckles had a bright red crest and another (Sinosauropterix) was ginger over its back with a tiger striped tail and a white underside; an example of countershaded camouflage. His team has even been able to assign different kinds of patterning to a variety of possible habitats. Given superbly preserved specimens it seems likely that dinosaur and bird coloration may be traceable back more than 200 Ma.

Artist’s impression of the small theropod dinosaur Microraptor showing colours predicted by analysis of melanosomes on its feathers.(credit: Wikipedia)

Another aspect of the filmic licence of Jurassic Park was its hinging on preservation of genetic material from the Mesozoic, specifically in a parasite preserved in amber, so that the creatures could be resurrected by bio-engineering. The only relevant find is a 46 Ma old mosquito whose abdomen was blood-engorged when it was fossilised. But all that remains are high iron concentrations the organic molecule porphyrin; break-down products of haemoglobin. Given that fossil DNA can only be reassembled from millions of fragmentary strands found in fossils in digital form that corresponds to the order of AGCT nucleobases that is barely likely to be possible – the oldest full genome yet analysed is that of a 700 ka horse. However, another biological material that varies hugely among living animals, protein, has proved to be tractable, albeit in a very limited way. Frozen mammoth meat, somewhat bloody, is sometimes unearthed from Siberian permafrost, but according to one Russian mammoth expert even the best preserved is inedible.

Beyond the Pleistocene the search for fossilised proteins has been hesitant and deeply controversial, particularly in the case of that from dinosaurs, for the obvious reason of publicity suspicions. But again, it is a story of persistence and patience. Mary Schweitzer of North Carolina State University claimed in 2007 that she had found some, but was howled down by other palaeontologists on the issues of its unlikely survivability and contamination. But other researchers had pushed back the age limits. By repeating their earlier analyses with the greatest possible care Schweitzer’s team confirmed their earlier results with several strands of the protein collagen about 15 amino acids in length from an 80 Ma old duck-billed dinosaur. Moreover they were able to show a closer affinity of the partial proteins to those of modern birds than to other reptiles, tallying with tangible fossil evidence (Schroeter, E.R and 8 others 2017. Expansion for the Brachylophosaurus canadensis Collagen I Sequence and Additional Evidence of the Preservation of Cretaceous Protein. Journal of Proteome Research, v. 16, p. 920-932). The work continues for other dinosaurs and early fossil birds, with better reason for confidence and a chance of tying-down genetic relatedness. Another approach shows that collagen may still be preserved in a Jurassic (195 Ma) sauropod dinosaur’s rib (Lee, Y-C. and 9 others 2017. Evidence of preserved collagen in an Early Jurassic sauropodomorph dinosaur revealed by synchrotron FTIR microspectroscopy. Nature Communications, v. 8 doi:10.1038/ncomms14220).

Studies of DNA among living animals suggest that our own group, the vertebrates of the phylum Chordata, originated from a common ancestor that we share with echinoderms (sea urchins, star fish, sea cucumbers etc) and one of many worm-like phyla. This superphylum comprises the deuterostomes, but it is just one of several that encompass all animals and happens to be one of the smallest in terms of the number of living species that belong to it. We deuterostomes are vastly outnumbered by arthropods, nematodes, other worm-like creatures, molluscs, the rest of the animal kingdom and, of course, single-celled organisms, plants and fungi. Yet the DNA-based Circle of Life reveals that the deuterostome ancestral spoke originated early on in animal evolution.

The ‘Circle of Life’ as compiled by Cody Hinchliffe of the University of Michigan and 21 collaborators from the USA, and partly based on Fischetti, M. 2016. The circle of life. Scientific American, v. 314 (March 2016).

The majority of animals of all kinds are blessed with a mouth separate from means of expelling waste products and can be divided into two similar halves, hence their name bilaterians. The earliest fossils judged to be of this kind date to about 580 to 600 Ma ago, in the Doushantuo Formation of southern China, all of them visible only using microscopes. A DNA-based molecular clock hints at around 900-1000 Ma for the emergence of all animal body plans known today. Now another important time marker has turned up, again in sediments showing exquisite fossil preservation from China (Han, J. et al. 2017. Meiofaunal deuterostomes from the basal Cambrian of Shaanxi (China). Nature, v. 542, (online); doi: 10.1038/nature21072). The Chinese-British team of palaeontologists has found tiny, bag-like fossils preserved in phosphate, which have a mouth surrounded by folds and conical openings on either side of the body. They lived in limy muds on the sea bed now preserved as limestones at the base of the Cambrian System (541 Ma) and probably had a habit akin to worms in the most general sense. The authors sifted through 3 tonnes of rock to recover the fossils, rather than relying on a lucky hammer stroke.

Not especially prepossessing, the fossils are said to show more affinity to deuterostomes than anything else and to be the earliest known fossil examples. Yet the world’s media pounced on them as the ‘earliest known human ancestors’, which is a bit rich as they could equally be the earliest sea urchins or may have led to several odd-looking fossils known only from the later Cambrian. It isn’t possible to say with any certainty that they lie on the path that led to chordates and thus ourselves. Of course, that would not raise headlines in newspapers of record, such as Britain’ Daily Telegraph, on the BBC News website or Fox News. The authors are much more honest, claiming only that the Saccorhytus coronarius fossils are probably deuterostomes whose affinities and later descendants are obscure. Their most important conclusion is that the cradle of our branch of animals lay in deep water muds laid down around the Precambrian-Cambrian boundary, ideal for subtly varied small, flabby creatures behaving like worms. Many more varieties are likely remain to be found in similar rocks of the late Precambrian and slightly younger Cambrian when they are studied painstakingly in microscopic detail. A start has been made, that’s all.

Note: Earth-Pages will be closing as of early July, but will continue in another form at Earth-logs

Accelerated evolution may occur when a small population of a species – whose genetic variability is therefore limited – becomes isolated from all other members. This is one explanation for the rise of new species, as in the Galapagos archipelago. Creation of such genetic bottlenecks encourages rapid genetic drift away from the main population. It has been suggested to explain sudden behavioural shifts in anatomically modern humans over the last hundred thousand years or so, partly through rapid and long-distance migrations and partly through a variety of environmental catastrophes, such as the huge Toba eruption around 74 ka. Another example has been proposed for the teemingly diverse flora and fauna of the Amazon Basin, particularly among its ~7500 species of butterflies, which has been ascribed to shrinkage of the Amazonian rain forest to isolated patches that became refuges from dry conditions during the last glacial maximum.

Potential forest cover inferred from global climate models for the last glacial maximum (top) the Holocene thermal maximum and at present.. (credit: Wikipedia)

A great deal of evidence suggests that during glacial maxima global climate became considerably drier than that in interglacials, low-latitude deserts and savannah grasslands expanding at the expense of humid forest. Yet the emerging complexity of how climate change proceeds from place to place suggests that evidence such continental drying from one well-documented region, such as tropical Africa, cannot be applied to another without confirming data. Amazonia has been the subject of long-standing controversy about such ecological changes and formation of isolated forest ‘islands’ in the absence of definitive palaeoclimate data from the region itself. A multinational team has now published data on climatic humidity changes over the last 45 ka in what is now an area of dense forest but also receives lower rainfall than most of Amazonia; i.e. where rolling back forest to savannah would have been most likely to occur during the last glacial maximum (Wang, X. et al. 2017. Hydroclimate changes across the Amazon lowlands over the past 45,000 years. Nature, v. 541, p. 204-207; doi:10.1038/nature20787).

Their study area is tropical karst, stalagmites from one of whose caves have yielded detailed oxygen-isotope time series. Using the U/Th dating technique has given the data a time resolution of decades covering the global climatic decline into the last glacial maximum and its recovery to modern times. The relative abundance of oxygen isotopes (expressed by δ18O) in the calcium carbonate layers that make up the stalagmites is proportional to that of the rainwater that carried calcium and carbonate ions dissolved from the limestones. The rainwater δ18O itself depended on the balance between rainfall and evaporation, higher values indicating reduced precipitation. Relative proportions of carbon isotopes in the stalagmites, expressed by δ13C, record the balance of trees and grasses, which have different carbon-isotope signatures. Rainfall in the area did indeed fall during the run-up to the last glacial maximum, to about 60% of that at present, then to rise to ~142% in the mid-Holocene (6 ka). Yet δ13C in the stalagmites remained throughout comparable with those in the Holocene layers, its low values being incompatible with any marked expansion of grasses.

Amazonian rain forest north of Manaus, Brazil. (credit: Wikipedia)

One important factor in converting rain forest to grass-dominated savannah is fire induced by climatic drying. Tree mortality and loss of cover accelerates drying out of the forest floor in a vicious circle towards grassland, expressed today by human influences in much of Amazonia. Fires in Amazonia must therefore have been rare during the last ice age; indeed sediment cores from the Amazon delta do not reveal any significant charcoal ‘spike’.

One of the most eagerly followed ocean-floor drilling projects has just released some results. Its target is 46 km radially away from the centre of the geophysical anomaly associated with the Chixculub impact structure just to the north of Mexico’s Yucatan Peninsula. In the case of large lunar impact craters the centre is often surrounded by a ring of peaks. Modelling suggests such features are produced by the deep penetration of immense seismic shock waves. In the first minute these excavate and fling out debris to leave a cavity penetrating deep into the crust. Within three minutes the cavity walls collapse inwards creating a rebound superficially similar to the drop flung upwards after an object is dropped in liquid. This, in turn, collapses outwards to emplace smashed and partially melted deep crustal material on top of what were once surface materials, creating a crustal inversion beneath a mountainous ring of Himalayan dimensions that surrounds a by-now shallow crater. That is the story modelled from what is known about well-studied, big craters on the Moon and Mercury. Chixculub is different because the impact was into the sea and involved debris-charged tsunamis that finally plastered the actual impact scar with sediments. The drilling was funded for several reasons, some palaeontological others relating to the testing of theories of impact processes and their products. Chixculub is probably the only intact impact crater on Earth, and the first reports of findings are in the second category (Morgan, J.V. and 37 others 2016. The formation of peak rings in large impact craters. Science, v. 354, p. 878-882; doi: 10.1126/science.aah6561).

Artist’s depiction of the Chicxulub impact 65 million years ago that many scientists say is the most direct cause of the dinosaurs’ disappearance (credit: Wikipedia)

The drill core, reaching down to about 1.3 km below the sea floor penetrates post-impact Cenozoic sediments into a 100 m thick zone of breccias containing fragments of impact melt rock, probably the infill of the central crater immediately following the first few minutes of impact. Beneath that are coarse grained granites representing the middle continental crust from original depths around 10 km. The granite is intensely fractured and riven by dykes and pods of impact melt, and contains intensely shocked grains that typify impacts that produce a transient pressure of ~60 GPa – around six hundred thousand times atmospheric pressure. From seismic reflection surveys this crustal material overlies as yet un-drilled Mesozoic sedimentary rocks. Its density is significantly less than that of unshocked granite – averaging 2.4 compared with 2.6 g cm3. So it is probably filled with microfractures and sufficiently permeable for water to have penetrated once the impact site had cooled. This poses the question, yet to be addressed in print, of whether or not this near-surface layer became colonised by microorganisms in the aftermath (Barton, P. 2016. Revealing the dynamics of a large impact. Science, v. 354, p. 836-837). That is, was the surrounding ocean sterilised at the time of the K-T (K-Pg) mass extinction?; an issue whose resolution is awaited with bated breath by the palaeobiology audience. OK; so theory about the physical process of cratering has been validated to some extent, but will later results be more interesting, outside the planetary sciences community?

For decades the record of tangible signs of life extended back to around 3.4 billion years ago, in the form of undulose, banded biofilms of calcite known as stromatolites preserved at North Pole in the Pilbara region of Western Australia. There have been attempts to use carbon-isotope data and those of other elements from older, unfossiliferous rocks to seek chemical signs of living processes that extracted carbon from the early seas. Repeatedly, claims have been made for such signatures being extracted from the 3.7 to 3.8 Ga Isua metasediments in West Greenland. But because this famous locality shows evidence of repeated metamorphism abiogenic formation of the chemical patterns cannot be ruled out. Isua has been literally crawled over since Vic McGregor of the Greenland Geological Survey became convinced in the 1960s that the metasediments could be the oldest rocks in the world, a view confirmed eventually by Stephen Moorbath and Noel Gale of Oxford University using Rb-Sr isotopic dating. There are slightly older rocks in Canada, which just break the 4 Ga barrier, but they were metamorphose at higher pressures and temperatures and are highly deformed. The Isua suprcrustals, despite deformation and metamorphism show far more diversity that geochemically can be linked to many kinds of sedimentary and volcanic rock types.

Two of the Isua addicts are Allen Nutman of the University of Wollongong, Australia and Clark Friend formerly of Oxford Brookes University, UK, who have worked together on many aspects of the Isua rocks for decades. Finally, thanks to melt-back of old snow pack, they and colleagues have found stromatolites that push the origin of life as far back as it seems possible for geoscientists to reach (Nutman, A.P. et al. 2016. Rapid emergence of life shown by discovery of 3,700-million-year-old microbial structures. Nature, v. 537, published online 31 August 2016, doi:10.1038/nature). The trace fossils occur in a marble, formerly a limestone that retains intricate sedimentary structures, which show it to have been deposited in shallow water. The carbon and oxygen isotopes have probably been disturbed by metamorphism, and no signs of cell material remain for the same reason, but the shape is sufficiently distinct from those produced by purely sedimentary processes to suspect that they resulted from biofilm build-up. The fact that they are made of carbonates suggests that they may have been produced by cyanobacteria as modern stromatolites are.

Stromatolite-like structures from a metasediment in the Isua area of West Greenland (credit Allen Nutman, University of Wollongong, Australia)

The age of the structures, about 3.7 Ga, is close to the end of the Late Heavy Bombardment (4. 1to 3.8 Ga) of the Solar System by errant asteroids and comets. So, if the physical evidence is what it seems to be, life emerged either very quickly after such an energetic episode or conditions at the end of the Hadean were not inimical to living processes or the prebiotic chemistry that led to them.

The Atmosphere and Ocean: A Physical Introduction, 3rd Edition

Impact Cratering: Processes and Products

Dinosaur Paleobiology

Fundamentals of Geobiology

Reconstructing Earth’s Climate History

Introduction to Geochemistry

Speleothem Science: From Process to Past Environments

Life in Europe Under Climate Change

Terrestrial Hydrometeorology

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