Medicago truncatula vs Lupinus angustifolius LastZ Results

Medicago truncatula (Medicago truncatula, MedtrA17_4.0) and Lupinus angustifolius (Lupinus angustifolius, LupAngTanjil_v1.0) were aligned using the LastZ alignment algorithm (LastZ)
in Ensembl Plants release . Medicago truncatula was used as the reference species. After running LastZ, the raw LastZ alignment blocks
are chained according to their location in both genomes. During the final netting process, the best
sub-chain is chosen in each region on the reference species.

Results

Number of alignment blocks: 445,766

Genome coverage (bp)

Coding exon coverage (bp)

Medicago truncatula

Uncovered: 316,466,329 out of 412,800,391Covered: 96,334,062 out of 412,800,391

Uncovered: 10,881,598 out of 50,132,764Matches: 29,926,035 out of 50,132,764Mismatches: 8,461,897 out of 50,132,764Insertions: 863,234 out of 50,132,764

Lupinus angustifolius

Uncovered: 464,158,752 out of 609,203,021Covered: 145,044,269 out of 609,203,021

Uncovered: 2,186,065 out of 42,631,353Matches: 31,817,994 out of 42,631,353Mismatches: 7,777,922 out of 42,631,353Insertions: 849,372 out of 42,631,353