Fusion

STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:query proteins and first shell of interactors

white nodes:second shell of interactors

Node Content

empty nodes:proteins of unknown 3D structure

filled nodes:some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

slr0701

Mercuric resistance operon regulatory protein MerR (137 aa)

Predicted Functional Partners:

sll0267

Hypothetical protein (1578 aa)

0.930

sll0779

PleD gene product homolog (884 aa)

0.864

sll1499

Ferredoxin-dependent glutamate synthase (1556 aa)

0.853

gltB

Ferredoxin-dependent glutamate synthase (1550 aa)

0.853

cph2

Hypothetical protein; Photoreceptor which exists in two forms that are reversibly interconvertible by light- the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region (1276 aa)

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1

node2

node1 accession

node2 accession

node1 annotation

node2 annotation

score

SYNGTS_2028

sll0782

SYNGTS_2028

SYNGTS_2757

No annotation available

Putative protein kinase

0.844

SYNGTS_2028

slr0701

SYNGTS_2028

SYNGTS_2770

No annotation available

Mercuric resistance operon regulatory protein MerR

0.825

SYNGTS_2028

slr1245

SYNGTS_2028

SYNGTS_1254

No annotation available

Transcriptional regulator

0.829

SYNGTS_2028

slr1705

SYNGTS_2028

SYNGTS_0663

No annotation available

Aspartoacylase, ASP

0.829

SYNGTS_2028

slr1870

SYNGTS_2028

SYNGTS_1091

No annotation available

Hypothetical protein

0.827

cph2

sll0267

SYNGTS_2574

SYNGTS_1926

Hypothetical protein; Photoreceptor which exists in two forms that are reversibly interconvertible by light- the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region

Hypothetical protein

0.990

cph2

sll0779

SYNGTS_2574

SYNGTS_2760

Hypothetical protein; Photoreceptor which exists in two forms that are reversibly interconvertible by light- the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region

PleD gene product homolog

0.989

cph2

sll0782

SYNGTS_2574

SYNGTS_2757

Hypothetical protein; Photoreceptor which exists in two forms that are reversibly interconvertible by light- the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region

Putative protein kinase

0.642

cph2

slr0701

SYNGTS_2574

SYNGTS_2770

Hypothetical protein; Photoreceptor which exists in two forms that are reversibly interconvertible by light- the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region

Mercuric resistance operon regulatory protein MerR

0.852

gltB

sll0267

SYNGTS_0442

SYNGTS_1926

Ferredoxin-dependent glutamate synthase

Hypothetical protein

0.560

gltB

sll0779

SYNGTS_0442

SYNGTS_2760

Ferredoxin-dependent glutamate synthase

PleD gene product homolog

0.477

gltB

sll0782

SYNGTS_0442

SYNGTS_2757

Ferredoxin-dependent glutamate synthase

Putative protein kinase

0.470

gltB

sll1499

SYNGTS_0442

SYNGTS_2989

Ferredoxin-dependent glutamate synthase

Ferredoxin-dependent glutamate synthase

0.999

gltB

slr0701

SYNGTS_0442

SYNGTS_2770

Ferredoxin-dependent glutamate synthase

Mercuric resistance operon regulatory protein MerR

0.853

sll0267

cph2

SYNGTS_1926

SYNGTS_2574

Hypothetical protein

Hypothetical protein; Photoreceptor which exists in two forms that are reversibly interconvertible by light- the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region

0.990

sll0267

gltB

SYNGTS_1926

SYNGTS_0442

Hypothetical protein

Ferredoxin-dependent glutamate synthase

0.560

sll0267

sll0779

SYNGTS_1926

SYNGTS_2760

Hypothetical protein

PleD gene product homolog

0.990

sll0267

sll0782

SYNGTS_1926

SYNGTS_2757

Hypothetical protein

Putative protein kinase

0.843

sll0267

sll1499

SYNGTS_1926

SYNGTS_2989

Hypothetical protein

Ferredoxin-dependent glutamate synthase

0.560

sll0267

slr0701

SYNGTS_1926

SYNGTS_2770

Hypothetical protein

Mercuric resistance operon regulatory protein MerR

0.930

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Network Stats

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Functional enrichments in your networkNote: some enrichments may be expected here (why?)

Enrichment analysis is still ongoing, please wait ...

Statistical background

For the above enrichment analysis, the following statistical background is assumed: