Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival, using best separation (to the left) and median separation (to the right). Patients were divided based on level of expression into one of the two groups "low" or "high". Below each Kaplan-Meier plot, corresponding expression cutoff, 5-year survival for patients with high expression, 5-year survival for patients with low expression and log-rank P value are displayed. For melanoma and glioma, 3-year survival is shown. The survival analysis is described in Assays & Annotation.

The tabs at the top of the survival analysis section can be used to switch between the different cancer subtypes.

Best separation

Median separation

Expression cutoff

23.3 FPKM

21.0 FPKM

3-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

0%

6%

3-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

The Scatter Survival plot shows the clinical status for all individuals in the patient cohort, based on the same data as in the Kaplan-Meier plots. Living patients are shown in blue and deceased patients in red. The x-axis shows the expression levels (FPKM) of the investigated gene at the time of diagnosis and the y-axis shows the number of years of survival (living years) after the diagnosis.

Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or several category buttons to the left. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be changed to "x linear" by clicking on the "x log" button on the left. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

Stage:

TCGA RNA samplesi

RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM

21.8

Number of samples

153

Samples

Sample

Description

FPKM

TCGA-27-2519-01A

48 years, male, white

53.0

TCGA-76-4929-01A

76 years, female, white

50.4

TCGA-19-2629-01A

60 years, male, white

41.3

TCGA-06-0130-01A

54 years, male, white

39.8

TCGA-28-5220-01A

67 years, male, white

38.9

TCGA-28-5207-01A

71 years, male, white

32.9

TCGA-08-0386-01A

74 years, male, white

32.3

TCGA-06-2569-01A

24 years, female, black or african american

32.1

TCGA-76-4925-01A

76 years, male, white

31.8

TCGA-02-0055-01A

62 years, female, white

31.4

TCGA-27-2526-01A

79 years, female, white

31.3

TCGA-06-0644-01A

71 years, male, black or african american

31.3

TCGA-27-2521-01A

34 years, male, white

30.7

TCGA-19-1787-01B

49 years, male, white

30.5

TCGA-26-5136-01B

78 years, female, white

30.5

TCGA-06-2562-01A

81 years, male, white

30.0

TCGA-27-1835-01A

53 years, female, white

30.0

TCGA-06-0745-01A

59 years, male, white

29.4

TCGA-14-0871-01A

75 years, female, white

29.1

TCGA-28-5215-01A

62 years, female, white

28.9

TCGA-14-0787-01A

69 years, male, asian

28.8

TCGA-06-0882-01A

30 years, male, white

28.8

TCGA-27-1834-01A

56 years, male, white

28.3

TCGA-06-5859-01A

63 years, male, white

28.0

TCGA-27-2528-01A

62 years, male, white

27.2

TCGA-26-5133-01A

59 years, male, white

27.0

TCGA-28-2499-01A

59 years, male, white

26.7

TCGA-06-5413-01A

67 years, male, white

26.7

TCGA-28-2509-01A

77 years, female, white

26.6

TCGA-06-5412-01A

78 years, female, white

26.6

TCGA-32-2634-01A

82 years, male, white

26.5

TCGA-06-5411-01A

51 years, male, white

26.2

TCGA-27-1832-01A

59 years, female, white

26.2

TCGA-41-2571-01A

89 years, male, white

26.2

TCGA-19-5960-01A

56 years, male, white

25.8

TCGA-06-5408-01A

54 years, female, white

25.7

TCGA-76-4926-01B

68 years, male, white

25.7

TCGA-12-0821-01A

62 years, male, white

25.7

TCGA-15-0742-01A

65 years, male, white

25.7

TCGA-06-2561-01A

53 years, female, white

25.5

TCGA-12-0616-01A

36 years, female, white

25.5

TCGA-32-1980-01A

72 years, male, white

25.5

TCGA-41-5651-01A

59 years, female, black or african american

25.2

TCGA-14-0781-01B

49 years, male, black or african american

24.7

TCGA-27-2524-01A

56 years, male, white

24.4

TCGA-28-5216-01A

52 years, male, white

24.4

TCGA-28-2513-01A

69 years, female, white

24.3

TCGA-06-0743-01A

69 years, male, white

24.2

TCGA-06-0649-01B

73 years, female, black or african american

24.0

TCGA-27-2523-01A

63 years, male, white

24.0

TCGA-32-2616-01A

48 years, female, white

23.6

TCGA-06-0156-01A

57 years, male, white

23.4

TCGA-06-0749-01A

50 years, male, black or african american

23.3

TCGA-06-0211-01B

47 years, male, white

23.3

TCGA-06-0187-01A

69 years, male, white

23.3

TCGA-12-0619-01A

60 years, male, white

22.9

TCGA-16-1045-01B

49 years, female, white

22.9

TCGA-32-2615-01A

62 years, male, white

22.8

TCGA-19-2625-01A

76 years, female, white

22.7

TCGA-76-4932-01A

50 years, female, white

22.6

TCGA-06-2563-01A

72 years, female, white

22.5

TCGA-06-0125-01A

63 years, female, white

22.5

TCGA-16-0846-01A

85 years, male, white

22.4

TCGA-02-2483-01A

43 years, male, asian

22.4

TCGA-06-0184-01A

63 years, male, white

22.2

TCGA-14-1825-01A

70 years, male, white

22.2

TCGA-06-0750-01A

43 years, male, white

22.1

TCGA-14-1823-01A

58 years, female, white

21.6

TCGA-06-2557-01A

76 years, male, black or african american

21.5

TCGA-27-1830-01A

57 years, male, white

21.4

TCGA-26-5134-01A

74 years, male, white

21.3

TCGA-06-2565-01A

59 years, male, asian

21.2

TCGA-06-0190-01A

62 years, male, white

21.2

TCGA-06-0132-01A

49 years, male, white

21.1

TCGA-06-5858-01A

45 years, female, white

21.1

TCGA-76-4928-01B

85 years, female, white

21.0

TCGA-32-2632-01A

80 years, male, white

21.0

TCGA-06-0747-01A

53 years, male, white

20.4

TCGA-06-0238-01A

46 years, male, white

20.4

TCGA-76-4931-01A

70 years, female, white

20.4

TCGA-14-1034-01A

60 years, female

20.3

TCGA-26-5132-01A

74 years, male, white

20.3

TCGA-06-0686-01A

53 years, male, white

20.3

TCGA-12-5299-01A

56 years, female, white

20.0

TCGA-41-2572-01A

67 years, male, white

19.9

TCGA-06-5414-01A

61 years, male, white

19.9

TCGA-06-0646-01A

61 years, male, white

19.7

TCGA-06-0878-01A

74 years, male, white

19.5

TCGA-32-1970-01A

59 years, male, white

19.2

TCGA-26-5139-01A

65 years, female, white

19.1

TCGA-76-4927-01A

58 years, male, white

19.1

TCGA-06-0219-01A

67 years, male, white

19.1

TCGA-06-2558-01A

75 years, female, white

19.1

TCGA-28-5209-01A

66 years, female, white

18.8

TCGA-14-0817-01A

69 years, female, white

18.7

TCGA-32-5222-01A

66 years, male, white

18.7

TCGA-06-0141-01A

62 years, male, white

18.7

TCGA-15-1444-01A

21 years, male, white

18.6

TCGA-06-0158-01A

73 years, male, white

18.3

TCGA-06-2567-01A

65 years, male, white

18.2

TCGA-06-0138-01A

43 years, male, white

18.2

TCGA-32-2638-01A

67 years, male, white

18.1

TCGA-19-4065-01A

36 years, male, white

18.0

TCGA-26-5135-01A

72 years, female, white

18.0

TCGA-28-5204-01A

72 years, male, white

18.0

TCGA-02-0047-01A

78 years, male, white

17.9

TCGA-19-2619-01A

55 years, female, black or african american

17.9

TCGA-02-2485-01A

53 years, male, black or african american

17.8

TCGA-14-2554-01A

52 years, female, white

17.6

TCGA-06-5416-01A

23 years, female, white

17.6

TCGA-27-1837-01A

36 years, male, white

17.6

TCGA-28-1747-01C

44 years, male, white

17.5

TCGA-26-1442-01A

43 years, male, white

17.5

TCGA-06-0157-01A

63 years, female, white

17.3

TCGA-28-5208-01A

52 years, male, white

17.3

TCGA-06-0168-01A

59 years, female, white

17.3

TCGA-41-4097-01A

63 years, female, white

17.2

TCGA-06-5856-01A

58 years, male, white

17.2

TCGA-12-3653-01A

34 years, female, white

17.1

TCGA-28-5213-01A

72 years, male, white

16.9

TCGA-06-0645-01A

56 years, female, white

16.9

TCGA-06-0210-01A

72 years, female, white

16.8

TCGA-06-0178-01A

39 years, male, white

16.5

TCGA-06-2564-01A

50 years, male, white

16.3

TCGA-12-1597-01B

62 years, female, white

16.1

TCGA-06-0174-01A

54 years, male, white

15.8

TCGA-12-0618-01A

49 years, male, white

15.7

TCGA-06-0744-01A

67 years, male, white

15.6

TCGA-28-2514-01A

45 years, male, asian

15.6

TCGA-41-3915-01A

48 years, male, white

15.5

TCGA-19-1390-01A

63 years, female, white

15.5

TCGA-02-2486-01A

64 years, male, white

15.4

TCGA-19-2620-01A

70 years, male, white

15.3

TCGA-06-5417-01A

45 years, female, white

15.3

TCGA-06-0129-01A

30 years, male, asian

15.1

TCGA-28-5218-01A

63 years, male, white

15.0

TCGA-27-1831-01A

66 years, male, white

14.6

TCGA-06-1804-01A

81 years, female, white

14.6

TCGA-12-3652-01A

60 years, male, white

14.5

TCGA-14-0790-01B

64 years, female, white

14.0

TCGA-28-1753-01A

53 years, male, white

14.0

TCGA-06-2570-01A

21 years, female, white

13.8

TCGA-12-5295-01A

60 years, female, white

13.7

TCGA-12-3650-01A

46 years, male, white

13.7

TCGA-19-2624-01A

51 years, male, white

13.6

TCGA-32-4213-01A

47 years, female, white

13.5

TCGA-06-5410-01A

72 years, female, white

13.2

TCGA-06-2559-01A

83 years, male, white

13.2

TCGA-32-1982-01A

76 years, female, white

12.9

TCGA-06-5418-01A

75 years, female, white

12.9

TCGA-14-0789-01A

54 years, male, white

12.7

TCGA-06-0139-01A

40 years, male, white

12.1

TCGA-14-1829-01A

57 years, male, black or african american

8.9

Show all

GLIOMA - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival, using best separation (to the left) and median separation (to the right). Patients were divided based on level of expression into one of the two groups "low" or "high". Below each Kaplan-Meier plot, corresponding expression cutoff, 5-year survival for patients with high expression, 5-year survival for patients with low expression and log-rank P value are displayed. For melanoma and glioma, 3-year survival is shown. The survival analysis is described in Assays & Annotation.

The tabs at the top of the survival analysis section can be used to switch between the different cancer subtypes.