Dear bioperler:
I was not able to get the description of subject into the result table
when I use
blast_seq.pl seq/*.fasta -eseq -prog blastn -db est_human -signif 1e-25
-wait 800 -expect 0.01 -html -nostats -desc -table 1 best > ../est.hits
Can anyone help me with this? We would very much want to have the hits
in the table with the subject descriptions parsed.
Secondly, is there a script that can be used to create html links to the
subjects in the table. We use Seals's hotgi, but it does not work on
the acc#.
Thank you in advance for your time and help!
Bo
--
Bo Yuan, Ph.D.
Human Cancer Genetics Program
The Ohio State University
420 West 12th Ave., Rm 424
Medical Research Facility
Columbus, OH 43210
Phone: (614) 292-0656
Fax: (614) 688-4761
Email: yuan.33@osu.edu
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