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The Pentagon has signed a directive to implement US President Donald Trump's policy barring most transgender people from serving in the military, the media reported.

Under the policy, transgender people who join the military after the order takes effect will have to serve in the gender they were assigned at birth. Service secretaries will be allowed to grant waivers on a case-by-case basis, according to the Hill magazine.

According to the memo signed on Tuesday by acting Deputy Defence Secretary David Norquist, the policy will go into effect in 30 days.

The directive was being issued after a court last week lifted the last of the orders preventing the transgender military policy from taking effect.

The Trump administration said it planned to move forward with the policy following the judge's ruling last week.

Still, advocates for transgender troops argued that the Pentagon was constrained by a fourth injunction, pointing to a stipulation in the order that allows for a period of time for the plaintiff to decide whether they want a rehearing in front of the court's full bench, the report said.