Assembly statistics graph

Pease visit github.com/rjchallis/assembly_stats for the most up to date documentation

Click on any colour tile in the legend to toggle visibility of that feature on/off

The radius of the central plot represents the length of the longest scaffold in the assembly

The angle subtended by the first (red) segment within this plot indicates the percentage of the assembly that is in the longest scaffold

The radial axis originates at the circumference and indicates scaffold length, this is on a square-root scale

Subsequent (grey) segments are plotted from the circumference and the length of segment at a given percentage indicates the cumulative percentage of the assembly that is contained within scaffolds of at least that length

The N50 and N90 scaffold lengths are indicated respectively by dark and light orange arcs that connect to the radial axis for ease of comparison

The cumulative number of scaffolds within a given percentage of the genome is plotted in purple originating at the centre of the plot