Figure 1.

Coverage characteristics for the sequenced genome. The coverage calculations ignore potential PCR duplicates and secondary alignments.
(A) Coverage depth distribution of the sequenced genome. The y-axis indicates the fraction
of the non-N bases in the reference sequence that has a particular coverage on the
x-axis. The curve in gray shows the Poisson distribution with the best fit to the
distribution. (B) GC characteristics of the aligned data. We calculate and plot the GC percentage
and average depth in non-overlapping windows of 50 kbp.