The effect of shock sterilization on marine Vibrio sp. is investigated by carrying out a bio-experiment based on a bubble-shockwave interaction. In the experiments, underwater shock waves with different strength and frequencies are produced by a high-voltage power supply in a cylindrical water chamber. The bio-experimental results show marine Vibrio sp. is completely inactivated in a short time by a 1.0-Hz electric discharge. However, a high sterilization effect requires a strong and high frequency of the bubble motion, and it also depends on the lifetime of the bubble. Subsequently, by an experiment with an air gap to prevent the underwater shock waves entering the cell suspension, it is found that the introduction of a strong shock pressure is not entirely required to obtain the effective sterilization. On the other hand, the direct effect of the sterilization by rebound shock wave resulting from the bubble-shock wave interaction is examined in the experiments. The results suggest that free radicals mainly contribute to killing marine bacteria, and direct mechanical effects of the bubble motion are not responsible. In addition, the creation of the OH radical is indirectly confirmed by measuring the H2O2 concentration. Finally, the Herring equation is solved to investigate the condition of free radical generation when considering the effect of thermal conductivity at the bubble interface. As a result, the effective sterilization conditions based on the bubble-shock wave interaction are clearly obtained.