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And how would i be able to do this? only know the basics of cmake for compiling

Presumably, it works a lot like the linux version of the install. However, for more general information on using cmake in windows, you might look at this tutorial, which was the clearest answer I could find. (I haven't used windows in over a decade, so it seems very confusing to me.)

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Yeah still confused my self on how i would change the directories for config / data files

Look at oXL0C0Xo's post above. That flag changes the config directory. You'll also see it in the drop-down under the linux core installation. The cmake command ought to be roughly the same, so something like

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--- Canned message start ---
It appears the issue in the original post was solved, so this thread shall be closed.
Should you encounter any other difficulties, please open a new thread.
--- Canned message end ---