CHANGES IN VERSION 1.9.3
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o Fix a bug in example of convertId function, which was caused by update of BioMart database. Thanks Dan.
CHANGES IN VERSION 1.9.1
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o Fix a bug when pathway_min is set to 1. Thanks Norbert Auer.
CHANGES IN VERSION 1.7.7
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NEW FEATURES
o New function: The pathway map without species information can be used as reference map with parameter speciesRefMap.
CHANGES IN VERSION 1.7.6
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NEW FEATURES
o New function: Downloading the latest pathway/gene link from KEGG website.
CHANGES IN VERSION 1.7.5
NEW FEATURES
o Changes in examples.
CHANGES IN VERSION 1.7.4
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NEW FEATURES
o Improvement for documents and examples.
CHANGES IN VERSION 1.7.3
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NEW FEATURES
o Improvement for the web interface.
CHANGES IN VERSION 1.7.2
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NEW FEATURES
o New function plot_pathway_cor: Caculating correlations between groups in each pathway and comparing with the correlations for other genes.
CHANGES IN VERSION 1.7.1
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NEW FEATURES
o Compound data was also supported; The parameters were modified for web interface.
CHANGES IN VERSION 0.99.2
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NEW FEATURES
o Improvement in processing expression matrix with only one time point
CHANGES IN VERSION 0.99.1
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NEW FEATURES
o Add the parameter lwd when type='lines'
CHANGES IN VERSION 0.99.0
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NEW FEATURES
o Improvement in the description of this package. Add notes for users in plot_profile function
CHANGES IN VERSION 0.1.2
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o Improvement in the codes of vignette file and re-submit to bioconductor as the final version
CHANGES IN VERSION 0.1.0
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NEW FEATURES
o Submit to bioconductor
CHANGES IN VERSION 0.0.7
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NEW FEATURES
o Finish the vignette file
CHANGES IN VERSION 0.0.6
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NEW FEATURES
o Improvement in help file and example source
CHANGES IN VERSION 0.0.5
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NEW FEATURES
o Add return value for plot_pathway function; Release to my colleague
CHANGES IN VERSION 0.0.4
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NEW FEATURES
o Finish help files and example source
CHANGES IN VERSION 0.0.3
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NEW FEATURES
o Add example data files
CHANGES IN VERSION 0.0.2
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NEW FEATURES
o Improvement in figure details
CHANGES IN VERSION 0.0.1
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NEW FEATURES
o Build 'CHANGES IN VERSION' package by CMD Install and CMD check