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This training gives an introduction to ChIP-seq data analysis, covering the processing steps starting from the reads to the peaks. Among all possible downstream analyses, the practical aspect will focus on motif analyses. A particular emphasis will be put on deciding which downstream analyses to...

Scientific topics: Mapping, ChIP-seq

Hands-on introduction to ChIP-Seq analysishttps://www.bits.vib.be/training-list/112-bits/training/upcoming-trainings/211-chip-seqhttps://tess.elixir-europe.org/materials/hands-on-introduction-to-chip-seq-analysisThis training gives an introduction to ChIP-seq data analysis, covering the processing steps starting from the reads to the peaks. Among all possible downstream analyses, the practical aspect will focus on motif analyses. A particular emphasis will be put on deciding which downstream analyses to perform depending on the biological question.
This training does not cover all methods available today. It does not aim at bringing users to a professional NGS analyst level but provides enough information to allow biologists understand what DNA sequencing practically is and to communicate with NGS experts for more in-depth needs.Morgane Thomas-ChollierMappingChIP-seqLife Science ResearchersPhD studentsbeginner bioinformaticianspost-docs2016-04-222017-10-09

This hands-on training provides an introduction to the analysis of qPCR data using Biogazelle's qbase+ software. Although this software allows to do various types of analyses (gene expression, copy number analysis, miRNA profiling), we will focus in the training on gene expression analysis....

Analysis of qPCR data using qbase+https://www.bits.vib.be/training-list/111-bits/training/previous-trainings/165-qbaseplus-traininghttps://tess.elixir-europe.org/materials/analysis-of-qpcr-data-using-qbaseThis hands-on training provides an introduction to the analysis of qPCR data using Biogazelle's qbase+ software. Although this software allows to do various types of analyses (gene expression, copy number analysis, miRNA profiling), we will focus in the training on gene expression analysis. qbase+ software is freely distributed by BITS to VIB scientists. Therefore the training will be limited to VIB scientists.Janick MathysPCR experimentGene expression analysisGene expressionLife Science ResearchersPhD studentspost-docs2016-04-222017-10-09