STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:query proteins and first shell of interactors

white nodes:second shell of interactors

Node Content

empty nodes:proteins of unknown 3D structure

filled nodes:some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ggtA

ATP-binding subunit of an ABC-type osmolyte transporter (363 aa)

Predicted Functional Partners:

slr0530

Membrane bound sugar transport protein (279 aa)

0.998

slr0531

Membrane bound sugar transport protein (298 aa)

0.995

lacF

Lactose transport system permease protein LacF (298 aa)

0.993

lacG

Lactose transport system permease protein LacG (270 aa)

0.989

slr0529

Hypothetical protein (421 aa)

0.987

cysT

Sulfate transport system permease protein; Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane (By similarity) (286 aa)

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1

node2

node1 accession

node2 accession

node1 annotation

node2 annotation

score

cysT

ggtA

SYNGTS_2949

SYNGTS_3035

Sulfate transport system permease protein; Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane (By similarity)

ATP-binding subunit of an ABC-type osmolyte transporter

0.932

cysT

sll0739

SYNGTS_2949

SYNGTS_2813

Sulfate transport system permease protein; Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane (By similarity)

ABC transporter

0.942

cysT

sll1878

SYNGTS_2949

SYNGTS_1638

Sulfate transport system permease protein; Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane (By similarity)

ABC transporter

0.806

ggtA

cysT

SYNGTS_3035

SYNGTS_2949

ATP-binding subunit of an ABC-type osmolyte transporter

Sulfate transport system permease protein; Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane (By similarity)

0.932

ggtA

lacF

SYNGTS_3035

SYNGTS_0809

ATP-binding subunit of an ABC-type osmolyte transporter

Lactose transport system permease protein LacF

0.993

ggtA

lacG

SYNGTS_3035

SYNGTS_1337

ATP-binding subunit of an ABC-type osmolyte transporter

Lactose transport system permease protein LacG

0.989

ggtA

sll0739

SYNGTS_3035

SYNGTS_2813

ATP-binding subunit of an ABC-type osmolyte transporter

ABC transporter

0.860

ggtA

sll1878

SYNGTS_3035

SYNGTS_1638

ATP-binding subunit of an ABC-type osmolyte transporter

ABC transporter

0.822

ggtA

slr0529

SYNGTS_3035

SYNGTS_2854

ATP-binding subunit of an ABC-type osmolyte transporter

Hypothetical protein

0.987

ggtA

slr0530

SYNGTS_3035

SYNGTS_2855

ATP-binding subunit of an ABC-type osmolyte transporter

Membrane bound sugar transport protein

0.998

ggtA

slr0531

SYNGTS_3035

SYNGTS_2856

ATP-binding subunit of an ABC-type osmolyte transporter

Membrane bound sugar transport protein

0.995

ggtA

srrA

SYNGTS_3035

SYNGTS_0781

ATP-binding subunit of an ABC-type osmolyte transporter

Periplasmic sugar-binding protein of ABC transporter

0.843

ggtA

stpA

SYNGTS_3035

SYNGTS_3034

ATP-binding subunit of an ABC-type osmolyte transporter

Glucosylglycerolphosphate phosphatase; Phosphorylates glucosylglycerol-phosphate the precursor of the osmoprotectant glucosylglycerol necessary for salt adaptation of Synechocystis

0.885

lacF

ggtA

SYNGTS_0809

SYNGTS_3035

Lactose transport system permease protein LacF

ATP-binding subunit of an ABC-type osmolyte transporter

0.993

lacF

lacG

SYNGTS_0809

SYNGTS_1337

Lactose transport system permease protein LacF

Lactose transport system permease protein LacG

0.999

lacF

sll0739

SYNGTS_0809

SYNGTS_2813

Lactose transport system permease protein LacF

ABC transporter

0.646

lacF

sll1878

SYNGTS_0809

SYNGTS_1638

Lactose transport system permease protein LacF

ABC transporter

0.792

lacF

slr0529

SYNGTS_0809

SYNGTS_2854

Lactose transport system permease protein LacF

Hypothetical protein

0.800

lacF

slr0531

SYNGTS_0809

SYNGTS_2856

Lactose transport system permease protein LacF

Membrane bound sugar transport protein

0.962

lacF

srrA

SYNGTS_0809

SYNGTS_0781

Lactose transport system permease protein LacF

Periplasmic sugar-binding protein of ABC transporter

0.990

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Network Stats

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Functional enrichments in your networkNote: some enrichments may be expected here (why?)

Enrichment analysis is still ongoing, please wait ...

Statistical background

For the above enrichment analysis, the following statistical background is assumed: