Oryza sativa Japonica Group vs Ipomoea triloba LastZ Results

Oryza sativa Japonica Group (Oryza sativa Japonica Group, IRGSP-1.0) and Ipomoea triloba (Ipomoea triloba, ASM357664v1) were aligned using the LastZ alignment algorithm (LastZ)
in Ensembl Plants release . Oryza sativa Japonica Group was used as the reference species. After running LastZ, the raw LastZ alignment blocks
are chained according to their location in both genomes. During the final netting process, the best
sub-chain is chosen in each region on the reference species.

Results

Number of alignment blocks: 159,398

Genome coverage (bp)

Coding exon coverage (bp)

Oryza sativa Japonica Group

Uncovered: 340,566,479 out of 375,049,285Covered: 34,482,806 out of 375,049,285

Uncovered: 13,780,071 out of 34,424,450Matches: 13,366,136 out of 34,424,450Mismatches: 6,729,749 out of 34,424,450Insertions: 548,494 out of 34,424,450

Ipomoea triloba

Uncovered: 423,876,450 out of 461,827,428Covered: 37,950,978 out of 461,827,428

Uncovered: 14,687,552 out of 39,533,495Matches: 16,260,432 out of 39,533,495Mismatches: 8,015,852 out of 39,533,495Insertions: 569,659 out of 39,533,495