ProfileSeq

Performs a quantitative comparison between profiles of genome-based signal. ProfileSeq allows for straightforward determination and correction of confounding factors. It permits to take into account mappability and input signal to perform the quantification. The tool returns the corrected counts per bin, and the regions that are significantly different between reference and control, with the corresponding p-values.

Supported by an Initial Training Network grant RNPNet (289007) from the European Commission; grants BIO2011-23920 and CSD2009-00080 from Ministerio de Economía y Competitividad (MINECO) from the Spanish Government; and by Fundación Sandra Ibarra de Solidaridad Frente al Cáncer.