Bespoke NGS data analysis: QFAB provides tailored bioinformatics services to biologists across the spectrum of computational techniques and services applicable to molecular biology and next generation sequencing. QFAB researchers design and implement custom bioinformatics approaches that are developed in consultation with researchers for specific questions in molecular biology.

We can also integrate your genomics data with other –omics, microarrays and clinical datasets.

Our NGS data analysis services include:

Whole genome sequencing data analysis

Assembly and mapping

Structural and functional annotation of the genome (ORF detection, assignment of genes,…)

Samples comparison

Expertise in human whole genome sequencing data analysis and gene variant analysis. QFAB is also a partner of the Garvan Institute of Medical Research for human whole genome sequencing using the Illumina HiSeq X Ten platform

Expertise in plant de novo genome assembly

PacBio bacterial genomes assembly

Pipelines

Automate your NGS data analysis with a custom analysis workflow. We can design and develop your pipelines, run them on our infrastructure, in the cloud or deploy it on your own systems.

RNA-Seq/miRNA/smRNA

De novo transcriptome assembly

Differential expression analysis

Detailed statistical analysis

Detection of novel splice isoforms or transcripts

Also available:

Alternative splicing

Calling for SNP variants

Pathway analysis

Time series analysis

Visualisation in genome browser

Annotation pipeline

Prediction of coding regions

Annotation of coding genes, non-coding RNA, tRNA, rRNA, miRNA…

Repeat identification

Statistics of annotation and analysis of GC content

ChipSeq Data Analysis

Mapping and genes identification

Comparison if samples regulated by the same transcription factor

Peak identification and reporting of genomic regions differing between control and experimental samples