In addition, we have also released Anima scripts that use the Anima executables as tools to perform more complex operations, including brain extraction, atlasing or diffusion multi-compartment models estimation.

Downloading and Licensing

Anima is not yet available in binary version. We distribute it as a git repository on github, licensed under the AGPL license. If you wish to use it using another license, please contact us at anima-licensing@inria.fr. Here are links to the repository and its documentation:

Github documentation wiki. This documentation wiki contains documentation on how to clone and compile Anima. It also contains descriptions as well as paper references for each of the algorithms. Please cite them if you use Anima for your research.

In addition to the documentation wiki, you can subscribe to the users mailing list by subscribing to the anima-users mailing list. If you find a bug in the code, don't hesitate also to submit an issue.

The same goes for Anima scripts. Here are the links you will need to install it on your system (much simpler, these are only scripts you need to install):