Utilizes the applicability of gene expression simulations. sgnesR is an easy-to-use interface for the simulation of gene expression profiles from a given network structure. Researchers can use a given biological network or generate a topological structure of different network types for which reaction parameters are specified in correspondence to given constraints. The reaction parameters of this tool can be modified and used in a flexible manner taking account of the underlying parameter distributions.

Type:

Desktop

sgnesR specifications

Unique identifier:

OMICS_19455

Software type:

Package/Module

Restrictions to use:

Academic or non-commercial use

Programming languages:

C, C++, R

Version:

0.90.1

Maintained:

Yes

Name:

Stochastic Gene Network Expression Simulator in R

Interface:

Command line interface

Operating system:

Unix/Linux, Mac OS, Windows

Computer skills:

Advanced

Stability:

Stable

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