<p> <b><i>Staphylococcus epidermidis</i> BCM-HMP0060</b>. This strain will be used for comparative genome analysis.

Please:

Use SRA Toolkit tools to directly operate on SRA runs.
Toolkit has capacity to find requested runs
at NCBI and download (and cache) only the part you really need. For example quality scores represent a majority
of data volume and you may not need them if you dump fasta only (versus fastq). Or if you are looking at particular
gene you may not need the reads aligned to other regions or not aligned at all.

Sequence substring: one of the biological reads for a spot should contain the substring
Examples:
ATTGGA,
^ATTGGA,
ATTGGA$,
ATGDNNAT,
ATGGA&GCGC
The strings are case insensitive, and belong to either 2NA or 4NA alphabets.
String length limited to 29 characters in 4NA alphabet
(includes IUPAC substitution codes) or 61 characters in 2NA alphabet (ACGT only).
Search is case insensitive and strings may be combined with boolean
operators & | ! (AND, OR, NOT)
See "SRA nucleotide search expressions" for more details.
Maximum size of Run to be search is
1.1G