Summary: As the Atlantis expedition reels from their narrow escape from the Replicators, their re-location to a new planet and the loss of their commander, Team Sheppard is also attempting to deal the internal fractures which have developed. After mistakes made in the heat of conflict, John and Rodney manage to broker an uneasy peace. Will their fragile relationship be strong enough to deal with the latest threat that Pegasus appears to now be throwing at them or will their worst fears succeed in destroying them completely?

Summary: In his trip to the future, John saw a possible reality in which his team died and Earth abandoned Atlantis. He managed to prevent the first, but now the IOA has recalled Colonel Carter and replaced her with Richard Woolsey, as holo-Rodney predicted. Determined to insure a better future for Atlantis and the Pegasus Galaxy, he gathers a group of trusted friends to help him guarantee Atlantis will remain operational no matter what anyone else has to say about it.

Summary: When Merry Steel goes off-world on a routine mission, she never expects to be captured by barbarians with the military commander of Atlantis. When they return to Atlantis, she begins to realize that there might have been more going on than met the eye.

Summary: With all that she had been through, it was understandable that Samantha Carter would need to let go. As her command of Atlantis comes to an abrupt end and she is unexpectedly forced to return home, Sam discovers that someone is waiting to catch her, though it is not who she expected.

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