Posts by rickbeeloo13

... Thankyou! I have one problem using HMMER when I use this command:
> hmmbuild --amino --informat "CLUSTAL" "hmmCytopolasm.hmm"
> "input.clustal"
I get the error:
> Error: CLUSTAL is not a recognized input sequence file format
**Any idea what I did wrong here?**
I can convert it to ...

... I have done a multiple sequence alignment for two proteins with similair sequence, however there are some minor differences which discriminate a cytoplasmic form from a mitochondria form. I downloaded the output of the MSA alignment as a consensus sequence and now I want to "blast" this against a ge ...

... I merged to networks (MPK3 and MPK6 regulated proteins) and uploaded this in Cytoscape.
Know I have a column for these two called source which is MPK3 for the MPK3 proteins and MPK6 for the MPK6 proteins.
I want to color the proteins based on the value in this "source" column(attribute) I saw some ...