This lecture gives an overview of exploratory analysis (clustering) and supervised analysis (prediction/classification), as well as visualization methods (heatmaps/PCA) and gene set analysis. It also shows how to transform count data to make it more suitable to apply the traditional methods...

Keywords: Statistical-model, Exploratory-analysis

Exploratory analysis and downstream analysishttps://microasp.upsc.se/ngs_trainers/Materials/tree/master/Content/RNA-Seq/Charlotte_Soneson/downstream_analysis_lecture_2015.mdhttps://tess.elixir-europe.org/materials/exploratory-analysis-and-downstream-analysisThis lecture gives an overview of exploratory analysis (clustering) and supervised analysis (prediction/classification), as well as visualization methods (heatmaps/PCA) and gene set analysis. It also shows how to transform count data to make it more suitable to apply the traditional methods developed (e.g.) for microarray data.Charlotte Soneson @charlotte, charlottesoneson@gmail.comStatistical-model, Exploratory-analysis