Within the context of KALLIMACHOS, an own marking editor was developed for the partial working group [[Novel figures:Main| reader guidance regarding to novel figures. Among the name ATHEN ('''A'''nnotation and '''T'''ext '''H'''ighlighting '''En'''vironment), a desktop application based on Eclipse RCP 4 and Apache UIMA arose. You can find a comprehensive tutorial as well as an access to the source code and use '''[https://gitlab2.informatik.uni-wuerzburg.de/kallimachos/Athen here]'''.

Within the context of KALLIMACHOS, an own marking editor was developed for the partial working group [[Novel figures:Main| reader guidance regarding to novel figures. Among the name ATHEN ('''A'''nnotation and '''T'''ext '''H'''ighlighting '''En'''vironment), a desktop application based on Eclipse RCP 4 and Apache UIMA arose. You can find a comprehensive tutorial as well as an access to the source code and use '''[https://gitlab2.informatik.uni-wuerzburg.de/kallimachos/Athen here]'''.

Version vom 24. August 2017, 11:43 Uhr

Tutorial for the use of the annotation editor ATHEN

Within the context of KALLIMACHOS, an own marking editor was developed for the partial working group [[Novel figures:Main| reader guidance regarding to novel figures. Among the name ATHEN (Annotation and Text Highlighting Environment), a desktop application based on Eclipse RCP 4 and Apache UIMA arose. You can find a comprehensive tutorial as well as an access to the source code and use here.

ATHEN especailly captivates with scalability to novel size as well as adding arbitrary analysis-engines to the program at runtime in this way, wherewhith the actual process of annotation equals to improved suggestions that are automatically generated.
ATHEN enables the user to define it's own scheme of annotation in terms of the UIMA- type system and annotate it.
As an alternative, the scheme can be created and used in OWL.

Apart from that, ATHEN provides further features:

support of OWL in order to create and annotate of ontolgies

support of Apache Lucene in order to answer queries about previously created annotations efficiently, wheter or net if manual or automatically

creation figure networks

annotation of image data by means of special annotations in Apache UIMA

possibility to compare annotations, e.g. for several annotators, with automatic display of accordance

complete support of process models of medical, ontological-based extraction of information

configurable, automatic pre-processing and application of analysis engines based on UIMA

conversion among different formats

expandability by means of flexible OSGI-Design without a change of the current code

self configurable user interface in order to set visible views

Furthermore, ATHEN supports the annotaion of following plan in a special way: