Re: Replicating hc2 spike sorting

at this point I cannot spend time looking at this. All I can say that it might be that for some datasets I made a mistake when extracting hippocampal data from a complete dataset that included entorhinal cortex and removing bad channels (to reduce size and make more homogeneous). Full dataset is later uploaded as hc-3. You should be able to find very same data without any reduction there.

Data processing was performed using NDmanager plugins and particular processing parameters should be in the original hc-3 xml files. If I am remembering right back then we didn't use median filter yet for high-pass filtering, and it was done using compiled matalb firfilter function (attached). Call would be