Medicago truncatula vs Phaseolus vulgaris LastZ Results

Medicago truncatula (Medicago truncatula, MedtrA17_4.0) and Phaseolus vulgaris (Phaseolus vulgaris, PhaVulg1_0) were aligned using the LastZ alignment algorithm (LastZ)
in Ensembl Plants release . Medicago truncatula was used as the reference species. After running LastZ, the raw LastZ alignment blocks
are chained according to their location in both genomes. During the final netting process, the best
sub-chain is chosen in each region on the reference species.

Results

Number of alignment blocks: 288,768

Genome coverage (bp)

Coding exon coverage (bp)

Medicago truncatula

Uncovered: 316,448,526 out of 412,800,391Covered: 96,351,865 out of 412,800,391

Uncovered: 10,475,191 out of 50,132,764Matches: 30,054,350 out of 50,132,764Mismatches: 8,742,729 out of 50,132,764Insertions: 860,494 out of 50,132,764

Phaseolus vulgaris

Uncovered: 418,133,900 out of 521,076,696Covered: 102,942,796 out of 521,076,696

Uncovered: 2,242,829 out of 34,663,348Matches: 25,105,215 out of 34,663,348Mismatches: 6,689,286 out of 34,663,348Insertions: 626,018 out of 34,663,348