CHANGES IN TESS VERSION 1.3.0
NEW FEATURES
o Added the skyline birth-death model for piecewise constant rates
o Added the skyline birth-death model for piecewise linear rates
o Added a family level sampling birth-death model
o Added a reversible jump MCMC to estimate number of rate changes
o Added a reversible jump MCMC to estimate the number of mass-extinction events.
o ...
BUG FIXES
o ...
o ...
CHANGES IN TESS VERSION 1.2.2 (not released)
NEW FEATURES
o Added a cut-off value for the maximum number of taxa simulated under simulations condition on the age of the tree.
BUG FIXES
o Corrected the likelihoods for diversified sampling.
CHANGES IN TESS VERSION 1.2.1
BUG FIXES
o Corrected the likelihoods for mass-extinctions.
o Improved the likelihoods for large trees.
CHANGES IN TESS VERSION 1.2.0
NEW FEATURES
o Included diversified sampling.
o Included age dependent sampling.
CHANGES IN TESS VERSION 1.1.0
NEW FEATURES
o MCMC algorithm is available for any model.
o Posterior prediction is available for any model.
o A posterior predictive simulation function.
CHANGES IN TESS VERSION 1.0.3
BUG FIXES
o globalBiDe.equations.pN had a missing constant factor.
o sim.globalBiDe.taxa.age.constant includes the sampling probability correctly.
OTHER CHANGES
o globalBiDe.likelihood uses now fast approximations too.
o sim.globalBiDe.taxa searches now for a reasonable range of the tmrca.
CHANGES IN TESS VERSION 1.0.2
BUG FIXES
o likelihood for constant rates had a bug for incomplete taxon sampling.
CHANGES IN TESS VERSION 1.0.1
BUG FIXES
o sim.globalBiDe.* had wrong ordering of speciation times.