Hi all,
I just downloadad and installed the package "GEOquery" from bioconductor
web site. The installation carried-out with no errors.
However, when I try to load the library: "library(GEOquery)", I get the
following error:
-------------------------------------------------------------------------
> library(GEOquery);
Error in makeClassRepresentation(Class, properties, superClasses,
prototype, :
element 2 is empty;
the part of the args list of 'list' being evaluated was:
(header = list(), )
Error : unable to load R code in package 'GEOquery'
Error: package/namespace load failed for 'GEOquery'
------------------------------------------------------------------------
This is the sessionInfo() output:
------------------------------------------------------------------------
> sessionInfo();
R version 2.6.0 (2007-10-03)
i686-pc-linux-gnu
locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
attached base packages:
[1] tools stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] Biobase_1.16.1 limma_2.12.0
loaded via a namespace (and not attached):
[1] rcompgen_0.1-15
----------------------------------------------------------------------
Looking at this output, It seems that the package is not installed.
However, when i do "installed.packages()" GEOquery appears in the list!
I can not figure-out where the error is...
Any help?
Thanks in advance!
Best,
Juan Carlos