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What is the cheapest airport to fly from in Canada? According to data from Cheapflights.ca's Airport Affordability Index, you'll avoid the most taxes and fees by flying from smaller airports like Kelowna in British Columbia or Moncton in New Brunswick. U.S. results named the Charleston, S.C. airport as the most affordable airport to fly from Stateside. See Cheapflight.ca's full list of the cheapest Canadian airports to fly from, along with the average ticket price based on fares to top destinations from each airport, in our photo gallery. (Fotolia)