Fusion

STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:query proteins and first shell of interactors

white nodes:second shell of interactors

Node Content

empty nodes:proteins of unknown 3D structure

filled nodes:some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

POPTR_0007s13090.1

Predicted protein (924 aa)

Predicted Functional Partners:

POPTR_0012s09330.1

Predicted protein (965 aa)

0.999

POPTR_0004s06030.1

Predicted protein (1089 aa)

0.999

POPTR_0002s08060.1

Uncharacterized protein (333 aa)

0.999

POPTR_0002s08030.1

Uncharacterized protein (271 aa)

0.999

POPTR_0005s20370.1

Predicted protein (342 aa)

0.999

POPTR_0009s04560.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)

0.999

POPTR_0001s25490.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1

node2

node1 annotation

node2 annotation

score

POPTR_0001s25490.1

POPTR_0002s08030.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Uncharacterized protein

0.994

POPTR_0001s25490.1

POPTR_0002s08060.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Uncharacterized protein

0.994

POPTR_0001s25490.1

POPTR_0002s08170.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Predicted protein

0.994

POPTR_0001s25490.1

POPTR_0003s12340.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Predicted protein

0.993

POPTR_0001s25490.1

POPTR_0004s06030.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Predicted protein

0.994

POPTR_0001s25490.1

POPTR_0005s20220.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Predicted protein

0.994

POPTR_0001s25490.1

POPTR_0005s20370.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Predicted protein

0.995

POPTR_0001s25490.1

POPTR_0007s13090.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Predicted protein

0.999

POPTR_0001s25490.1

POPTR_0009s04560.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

0.801

POPTR_0001s25490.1

POPTR_0012s09330.1

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

Predicted protein

0.994

POPTR_0002s08030.1

POPTR_0001s25490.1

Uncharacterized protein

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

0.994

POPTR_0002s08030.1

POPTR_0002s08170.1

Uncharacterized protein

Predicted protein

0.995

POPTR_0002s08030.1

POPTR_0003s12340.1

Uncharacterized protein

Predicted protein

0.992

POPTR_0002s08030.1

POPTR_0004s06030.1

Uncharacterized protein

Predicted protein

0.907

POPTR_0002s08030.1

POPTR_0005s20220.1

Uncharacterized protein

Predicted protein

0.997

POPTR_0002s08030.1

POPTR_0007s13090.1

Uncharacterized protein

Predicted protein

0.999

POPTR_0002s08030.1

POPTR_0009s04560.1

Uncharacterized protein

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

0.994

POPTR_0002s08030.1

POPTR_0012s09330.1

Uncharacterized protein

Predicted protein

0.922

POPTR_0002s08060.1

POPTR_0001s25490.1

Uncharacterized protein

Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand

0.994

POPTR_0002s08060.1

POPTR_0002s08170.1

Uncharacterized protein

Predicted protein

0.995

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Network Stats

Network Stats analysis is still ongoing, please wait ...

Functional enrichments in your networkNote: some enrichments may be expected here (why?)

Enrichment analysis is still ongoing, please wait ...

Statistical background

For the above enrichment analysis, the following statistical background is assumed: