Starter decks

Starter Decks are given to new players and are gradually unlocked in the Trainer Challenge. This unlocking process automatically replaces certain cards each time a new computer-controlled opponent is defeated with that deck. After beating seven different opponents in the Trainer Challenge with each deck (which may include the same opponent in a different league), they are fully unlocked for use in Versus Mode against regular opponents.

The current theme decks were introduced in build 2.39 on September 26, 2016.

Bonus decks

None of the decks redeemed from a purchasable tin is allowed to be used in Theme Deck play, but can be used in Standard Deck and Extended Deck play. Online decks obtained from tins can also be edited at the user's discretion, unlike other online-exclusive decks. Some decks obtained from tins can be fully traded as a package before being opened, but once opened, 53 of its cards are permanently locked. See each deck below for more information on its unlocked cards.

Rallying Cry

The Rallying Cry deck can be redeemed in the in-game Shop by entering one of these redemption codes: "boundariescrossed", "plasmastorm", "plasmafreeze", "plasmablast", "legendarytreasures", "flashfire", "furiousfists", or "phantomforces". Using these codes, the cards can be obtained multiple times after opening the deck box.

Rallying Cry is able to be used in Trainer Challenge as well as in theme deck play against other players.