IFB French Institute of Bioinformatics

The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in...

126 training materials

21 upcoming events(346 past events)

IFB French Institute of Bioinformaticshttp://www.france-bioinformatique.fr/enhttps://tess.elixir-europe.org/content_providers/ifb-french-institute-of-bioinformaticsThe French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research infrastructure, ELIXIR./system/content_providers/images/000/000/049/original/ifb-logo_1.png?1469458221

Birmingham Metabolomics Training Centre

Providing training to empower the next generation of metabolomics researchers.
The Birmingham...

8 upcoming events(9 past events)

Birmingham Metabolomics Training Centrehttps://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list.aspxhttps://tess.elixir-europe.org/content_providers/birmingham-metabolomics-training-centreProviding training to empower the next generation of metabolomics researchers.
The Birmingham Metabolomics Training Centre provides training to the metabolomics community in both analytical and computational methods. The training centre partners with both the Phenome Centre Birmingham and the NERC Biomolecular Analysis Facility to provide vocational training courses in clinical and environmental metabolomics. We offer a combination of both face-to-face and online courses.
The Birmingham Metabolomics Training Centre is directed by Dr Warwick Dunn, Professor Mark Viant, Dr Ralf Weber and Dr Catherine Winder./system/content_providers/images/000/000/084/original/12106_BMTC_lock-up_AW-01.jpg?1508159124

BioExcel

BioExcel is a Centre of Excellence for Computational Biomolecular Research set up to support...

1 upcoming event(10 past events)

BioExcelhttp://bioexcel.eu/https://tess.elixir-europe.org/content_providers/bioexcelBioExcel is a Centre of Excellence for Computational Biomolecular Research set up to support academia and industry in the use of high-end computing in biomolecular research./system/content_providers/images/000/000/053/original/BioExcel_logo_payoff.png?1470306206

OpenRiskNet

The main objective of OpenRiskNet is to develop an open e-Infrastructure providing resources and...

1 upcoming event(9 past events)

OpenRiskNethttps://openrisknet.org/https://tess.elixir-europe.org/content_providers/openrisknetThe main objective of OpenRiskNet is to develop an open e-Infrastructure providing resources and services to a variety of communities requiring risk assessment, including chemicals, cosmetic ingredients, therapeutic agents and nanomaterials.
OpenRiskNet is
* a virtual research environment for predictive toxicology and chemical and nanomaterial risk assessment,
* harmonising access to data and facilitating interoperability of software,
* easily deployable to single computers, public and in-house cloud solutions,
* addressing the needs of industry and academic researchers, risk assessors, regulators and informed public.
OpenRiskNet (Grant Agreement 731075) is a 3-years project funded by the European Commission within the Horizon2020 Programme/system/content_providers/images/000/000/097/original/ORN-Web_Logo3.png?1533933310

Thermo Fisher Scientific

Thermo Fisher Scientific is the world leader in serving science, a company with approximately...

1 upcoming event(6 past events)

Thermo Fisher Scientifichttps://learn.thermofisher.com/europe/courses/https://tess.elixir-europe.org/content_providers/thermo-fisher-scientificThermo Fisher Scientific is the world leader in serving science, a company with approximately 50,000 employees in 50 countries, creating products and services that enable our customers to make the world healthier, cleaner and safer.
Our EMEA team runs workshops and a bioinformatics career professional development programme across Europe. Our bioinformatics training programme is not limited to Ion Torrent™ users, but anybody dealing with NGS data analysis. Molecular biologists and bench scientists with an interest to go beyond the graphic interface will enjoy our courses. We offer you a chance to explore the open source world associated to bioinformatics with our experts./system/content_providers/images/000/000/052/original/Thermo_logo.jpg?1469615410

Department of Bioinformatics - BiGCaT, Maastricht University

The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and...

5 training materials

0 upcoming events(1 past event)

Department of Bioinformatics - BiGCaT, Maastricht Universityhttps://www.bigcat.unimaas.nl/https://tess.elixir-europe.org/content_providers/department-of-bioinformatics-bigcat-maastricht-universityThe department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate experimental data and data with current knowledge. Integrative Systems Biology is being developed and applied in various research fields. The department has four core research areas; 1) Metabolic diseases, 2) Micronutrients, 3) Toxicity and risk Assessment and 4) Rare diseases. Within these areas different types of data, like transcriptomics, proteomics, metabolomics and (epi)genomics data, are collected , integrated and combined with existing knowledge/system/content_providers/images/000/000/093/original/logo_05_72dpi.gif?1528366508

ELIXIR-SI eLearning Platform (EeLP)

ELIXIR-SI eLearning Platform (EeLP)https://elixir.mf.uni-lj.si/https://tess.elixir-europe.org/content_providers/elixir-si-elearning-platfrom-eelpELIXIR-SI eLearning Platform (EeLP) is a learning management system (LMS) continuously administered and maintained by ELIXIR Slovenia.
EeLP enables all-in-one-place access to materials, tools and services for any course, tutorial or webinar that is hosted on the platform./system/content_providers/images/000/000/108/original/eelp-logo-with-slogan.jpg?1544007788

University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH)

The ongoing development of next generation sequencing (NGS) technologies has meant that vast...

0 upcoming events(2 past events)

University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH)https://www2.le.ac.uk/colleges/medbiopsych/facilities-and-services/cbs/bbashhttps://tess.elixir-europe.org/content_providers/university-of-leicester-bioinformatics-and-biostatistics-analysis-support-hub-bbashThe ongoing development of next generation sequencing (NGS) technologies has meant that vast amounts of sequencing data is being produced, with researchers increasingly wanting the capability and knowledge to analyse their own data. Over the past 3 years BBASH has developed a number of 1, 2 and 3 day hands-on, NGS analysis workshops designed specificially to meet the needs of laboratory based researchers with little or no experience of NGS data analysis and command line tools. The workshops are held at the University of Leicester's state of the art College Court Conference Centre and consist of introductory presentations followed by practical sessions where delegates will gain hands-on experience of analysing and interpreting real data. The BBASH trainers are University of Leicester bioinformaticians or researchers with many years experience in bioinformatics and bioinformatics training, having delivered many workshops across the UK and Europe./system/content_providers/images/000/000/086/original/BBASHlogo.png?1509536575

Biomedical Sciences Research Center "Alexander Fleming"

The Biomedical Sciences Research Center "Alexander Fleming" is a non-profit research organisation...

1 training material

1 upcoming event(0 past events)

Biomedical Sciences Research Center "Alexander Fleming"https://www.fleming.gr/https://tess.elixir-europe.org/content_providers/biomedical-sciences-research-center-alexander-flemingThe Biomedical Sciences Research Center "Alexander Fleming" is a non-profit research organisation based in Vari, Athens, Greece.
Since the beginning of its operations in 1998, the Center develops basic as well as translational and applied research programs at the cutting edge of modern biomedical sciences. Currently, the Center hosts 14 research groups distributed in 4 Institutes (Immunology, Molecular Oncology, Molecular Biology and Genetics, Cellular & Developmental Biology). Over the short period since its establishment, BSRC "Alexander Fleming" has gained extensive visibility in the European science arena.
Fleming researchers have established transgenic animal models for rheumatoid arthritis, inflammatory bowel disease and multiple sclerosis and these models have served as a basis for multiple collaborations with the international biopharmaceutical industry in the evaluation of novel therapeutic compounds, or as tools for collaborative R&D.
The Center is equipped with state-of-the-art Core Units which include: an Expression Profiling Facility, a Flow Cytometry Facility, a Protein Chemistry Lab, a Transgenics and gene targeting Unit, and a BioIT Unit, all of which serve internal collaborations, as well as external partners in academia and industry. The Center also runs an Innovation and Enterprise Unit that facilitates the protection and exploitation of the Center’s research and technologies.
Fleming operates its own Animal House, which can house up to 15,000 mice, and has its own complete mouse histopathology unit. Fleming’s Animal house (certified with ISO 9001) provides husbandry of animals and services to the biomedical research community since 2001. It covers an area of approximately 600 m2 within the Center and is equipped with highly automated systems that provide the best possible conditions for mouse reproduction and maintenance. Its main activity is the reproduction and maintenance of mice stocks either of inbred strains or genetically engineered mice, such as transgenic and knockout mouse lines, as well as chemically induced mutants developed by Fleming researchers. The Animal House has a capacity to house more than 18,000 mice and is currently the largest Mouse Unit in Greece in terms of number and variety of mice. The Facility became a full member of EMMA in 2009.
Main areas of research: Functional genomics and proteomics; Molecular and cellular immunology; Animal models of human disease; Transcriptional and post-transcriptional mechanisms of gene regulation; DNA repair; Stem Cell differentiation; Epigenetics; Learning and memory; ECM biology. Fields of excellence: Molecular mechanisms of disease (inflammation, cancer, metabolic syndrome, CNS disorders)./system/content_providers/images/000/000/051/original/logo.png?1469458221

Jalview

Jalviewhttp://www.jalview.org/https://tess.elixir-europe.org/content_providers/jalviewJalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure.
Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has editing and annotation functionality within a fully integrated, multiple window interface. The sequence alignment programs Clustal Omega, Muscle, MAFFT, ProbCons, T-COFFEE, ClustalW, MSA Prob and GLProb can be run directly from within Jalview. Jalview integrates protein secondary structure prediction (JPred), generate trees, assesses consensus and conservation across sequence families. Journal quality figures can be generated from the results.
The Jalview Desktop will run on Mac, MS Windows, Linux and any other platform that supports Java.
It has been developed in Geoff Barton's group (www.compbio.dundee.ac.uk) in the School of Life Sciences (www.lifesci.dundee.ac.uk) at the University of Dundee with funding from the BBSRC and the Wellcome Trust./system/content_providers/images/000/000/091/original/logo-boxg.png?1524735946